mRNA_M-pyrifera_M_contig109526.1997.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Match: A0A2E7KN17_9PLAN (Uncharacterized protein n=8 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KN17_9PLAN) HSP 1 Score: 380 bits (977), Expect = 4.550e-130 Identity = 199/201 (99.00%), Postives = 199/201 (99.00%), Query Frame = 1
Query: 1 CAVVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLPDPKALVAMDVVAALDSEKKITKTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFFP 603
CAVVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKL DPKALVAMDVVAALDSEKKI KTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFFP
Sbjct: 55 CAVVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLADPKALVAMDVVAALDSEKKIAKTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFFP 255
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Match: A0A518A1D3_9PLAN (Putative endoribonuclease L-PSP n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A1D3_9PLAN) HSP 1 Score: 352 bits (902), Expect = 6.310e-119 Identity = 179/201 (89.05%), Postives = 193/201 (96.02%), Query Frame = 1
Query: 1 CAVVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLPDPKALVAMDVVAALDSEKKITKTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFFP 603
CAVVKNSVLAHTSQILP+NF GG+VV GNAGDQT +VL+NLDYLLGKV+ATLY+IVKLNVYVAREELV EVKQRL+KELKFKVQPACTFVV++LPDP+ALVAMDVVAALDS+KKI+KTEIYND VSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLK+LGGSPENIVHLKAFLTPMKQG S+ EVID FFP
Sbjct: 38 CAVVKNSVLAHTSQILPLNFKGGKVVPGNAGDQTGLVLENLDYLLGKVNATLYKIVKLNVYVAREELVPEVKQRLIKELKFKVQPACTFVVSQLPDPQALVAMDVVAALDSDKKISKTEIYNDAVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKYLGGSPENIVHLKAFLTPMKQGNSAMEVIDGFFP 238
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Match: A0A517RAA0_9PLAN (Endoribonuclease L-PSP n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RAA0_9PLAN) HSP 1 Score: 286 bits (731), Expect = 5.120e-93 Identity = 141/201 (70.15%), Postives = 170/201 (84.58%), Query Frame = 1
Query: 1 CAVVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLPDPKALVAMDVVAALDSEKKITKTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFFP 603
C +VK+ VLAHTSQILP+N GGQ+ AG A DQT +VL+NL YLLGKVD+ L ++VKLN+YVARE+LV EV+QRL +EL+ QPACT+VVTKLPDPKALVAMD VA S KK+ + +I+ND+VSGFR ALLPAGRTAYISGQAVKADTL E+TKKTMEEL QTLK+LGGSPENI+ +KAFLTPM + ++++VID FFP
Sbjct: 38 CVIVKDDVLAHTSQILPLNIKGGQIAAGGAVDQTVLVLKNLKYLLGKVDSNLNQLVKLNIYVAREDLVPEVRQRLAQELEVTAQPACTYVVTKLPDPKALVAMDAVAVSGSNKKLAQAQIFNDDVSGFRAALLPAGRTAYISGQAVKADTLAESTKKTMEELFQTLKYLGGSPENIIQIKAFLTPMSEATAASQVIDGFFP 238
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Match: A0A517WUR3_9PLAN (Aminoacrylate peracid reductase RutC n=4 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WUR3_9PLAN) HSP 1 Score: 276 bits (706), Expect = 6.090e-89 Identity = 136/201 (67.66%), Postives = 167/201 (83.08%), Query Frame = 1
Query: 1 CAVVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLPDPKALVAMDVVAALDSEKKITKTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFFP 603
C VVK++VL HTSQILP+N GGQ+ + NA DQTA+VL+NL+YLL KVD+ L R+VKLN+YVARE+LV +V+QR+ +EL+ QPACT+VVTKLP P ALVAMD VAA +S K++ K +IYND VSGF +LLPAGRTAYISGQAVKADTL EAT+KTMEELHQTLK++G SP N++H+KAF+TPMK+ VIDSFFP
Sbjct: 61 CVVVKDTVLVHTSQILPLNLKGGQIPSANASDQTALVLKNLNYLLKKVDSNLNRLVKLNIYVAREDLVQQVQQRIKEELEVIAQPACTYVVTKLPGPNALVAMDAVAATNSSKQLAKVQIYNDEVSGFSASLLPAGRTAYISGQAVKADTLTEATRKTMEELHQTLKYIGTSPSNVIHVKAFMTPMKEANDVELVIDSFFP 261
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Match: A6C0U9_9PLAN (Uncharacterized protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A6C0U9_9PLAN) HSP 1 Score: 270 bits (690), Expect = 8.050e-87 Identity = 135/201 (67.16%), Postives = 164/201 (81.59%), Query Frame = 1
Query: 1 CAVVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLPDPKALVAMDVVAALDSEKKITKTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFFP 603
C VV++ VLAHTSQILP+N GG + AGDQTA+VL+NLDYLL KVD +L ++VKLN+YVAREELV+EV+QRL +EL+ QPACT+VVTKLPDPKALVAMD VAA +S K+T+T+++ND SGFRVALLPAGRTAYISGQAVKADT+ EA TM+EL QTL++LG P+NIVH+KAF+TPM Q E+ID FP
Sbjct: 38 CVVVRDDVLAHTSQILPLNIKGGMITPTGAGDQTALVLKNLDYLLKKVDCSLNKLVKLNIYVAREELVAEVQQRLTQELELIAQPACTYVVTKLPDPKALVAMDAVAATESSSKLTETKVFNDAPSGFRVALLPAGRTAYISGQAVKADTVSEAAILTMKELFQTLEYLGAKPKNIVHIKAFMTPMSQANEVNEMIDGIFP 238
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Match: A0A518I794_9PLAN (Aminoacrylate peracid reductase RutC n=1 Tax=Gimesia fumaroli TaxID=2527976 RepID=A0A518I794_9PLAN) HSP 1 Score: 265 bits (676), Expect = 1.020e-84 Identity = 130/201 (64.68%), Postives = 164/201 (81.59%), Query Frame = 1
Query: 1 CAVVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLPDPKALVAMDVVAALDSEKKITKTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFFP 603
C +VK+ VL HTSQILP+N GG++ + + DQ +VL+NL+YLL KVD++L ++VKLN+YV E+L+ EV QRL+KELK QPACTF+VTKL DPK LVAMD VA S +K++K I+ND+VSGFR ALLPAGRTAYISGQAVKADTL E+TKKTMEEL QT+K+LGGSPENI+ +KAFLTPM + ++++VID FFP
Sbjct: 38 CVIVKDDVLVHTSQILPLNIKGGRITSESGSDQCVLVLKNLNYLLEKVDSSLNQLVKLNIYVTHEDLIQEV-QRLIKELKLPAQPACTFIVTKLSDPKVLVAMDAVAVTGSNQKLSKAVIFNDDVSGFRAALLPAGRTAYISGQAVKADTLAESTKKTMEELFQTIKYLGGSPENIIQIKAFLTPMSEATAASQVIDGFFP 237
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Match: A0A177R5L2_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium SCGC AG-212-F19 TaxID=1799658 RepID=A0A177R5L2_9PLAN) HSP 1 Score: 129 bits (323), Expect = 4.620e-32 Identity = 84/202 (41.58%), Postives = 113/202 (55.94%), Query Frame = 1
Query: 7 VVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLPDPKALVAMDVVAALD----SEKKITKTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFF 600
VV + LAHT+Q+LPI+ G V + Q VL NL L + A L R VK+NVYV R ++ EV + + + V+PA TFV LP ALVAMD VAA+ E K ++ + +A++PAG YISGQAVK + L +T+KTME L +TLKFLG + +VH+K FL PM + + I FF
Sbjct: 43 VVDPTALAHTAQLLPIDSAGRIVGKDDPAAQVEKVLDNLAAALQEARAGLDRAVKVNVYVRRPAVIGEVHKAMARRFSGAVKPAITFVEGTLPHTDALVAMDAVAAVGPDGPGEVKRLRSAALPGAKNTTHLAIMPAGPHVYISGQAVKGEDLATSTRKTMEGLRETLKFLGLNEAQVVHVKGFLKPMAAVAEAEKEIARFF 244
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Match: B9XE23_PEDPL (Endoribonuclease L-PSP n=1 Tax=Pedosphaera parvula (strain Ellin514) TaxID=320771 RepID=B9XE23_PEDPL) HSP 1 Score: 122 bits (305), Expect = 1.980e-29 Identity = 79/204 (38.73%), Postives = 111/204 (54.41%), Query Frame = 1
Query: 7 VVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLPDPKALVAMDVVAALDSEK------KITKTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFF 600
+V + LAHT+Q LP + G V GN QT ++NL L +VK+NVYV+R+E V V + L + K +P+ TFV L P ALVAMD VA + +EK ++ + + D + VA+LP+G YISGQA D + EAT+ T+ L +TLKFLG S ++V LKAF+ P+ E + FF
Sbjct: 48 IVDDVPLAHTAQFLPFSEKGEIVGKGNVAQQTKQSIENLKRALVLAGTDWTHVVKINVYVSRDENVESVAKVLAQTFSGKAKPSVTFVTGNLTTPDALVAMDAVAVVKTEKPQSSSQRMAMQQGFKDKTAA--VAILPSGGKFYISGQAKNGD-ITEATRGTLASLEETLKFLGLSKTHVVQLKAFMQPISDKEIVEAEVAKFF 248
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Match: A0A847GLZ1_9BACT (RidA family protein n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GLZ1_9BACT) HSP 1 Score: 120 bits (301), Expect = 1.220e-28 Identity = 78/195 (40.00%), Postives = 115/195 (58.97%), Query Frame = 1
Query: 7 VVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLPDPKALVAMDVVAAL--DSEKKITKTEIYN-----DNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGE 570
VV+ LAHT+QILP++ G V G+ Q A L NL+ L V + +VKLN YV + S ++ L K V+PA ++V T+LP PKA++A+D VAA+ D + + +++ + D G VA+LP G+ Y+SGQA + D L AT +T+E L +T+ LG ++VH+KAFLTPM+Q E
Sbjct: 86 VVQGYALAHTAQILPLDHRGQLVGDGSVDAQLAQALFNLEAALAAVGSGSEHLVKLNFYVDGPKTASAARKMLSKRFPAPVRPALSWVSTRLPHPKAMLALDAVAAVPGDGPRAVVRSDGWTQPGQEDAAGG--VAVLPRGQCVYVSGQAEQGD-LPAATARTLESLLKTIGCLGLDAGHVVHVKAFLTPMEQAE 277
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Match: UPI0019B1C0D0 (RidA family protein n=1 Tax=Phormidesmis sp. FL-bin-119 TaxID=2762586 RepID=UPI0019B1C0D0) HSP 1 Score: 118 bits (295), Expect = 1.550e-28 Identity = 73/199 (36.68%), Postives = 114/199 (57.29%), Query Frame = 1
Query: 7 VVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDATLYRIVKLNVYVAREELVSEVKQRLVKELKFKVQPACTFVVTKLPDPKALVAMDVVAALD-SEKKITKTEIYNDNVSGFRVALLPAGRTAYISGQAVKADTLEEATKKTMEELHQTLKFLGGSPENIVHLKAFLTPMKQGESSAEVIDSFF 600
+V LAHT Q LP+N NG N Q + +N+ L A + +IVKLNV++ R +L+S+V+ + ++ K +P+ TF L P+AL+AMD +A D K+ K D++ VA+LP G Y+SGQA K + L EAT+ T+++L +TL LG + ++IV +K+FL+PM SS +++ F
Sbjct: 49 IVGEVALAHTRQFLPLNDNGNISQKDNLSKQVDQLFRNISRALKPAGADIDKIVKLNVFLRRADLISQVQPLISRKFGQKRKPSITFAAGDLSHPEALIAMDAIAVSDLGSVKMVKLSGLRDSMGQAAVAILPKGPVVYVSGQASKGE-LAEATRNTLKQLEETLISLGLNRKDIVQVKSFLSPM----SSLNIVEKEF 242 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109526.1997.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 23
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109526.1997.1 >prot_M-pyrifera_M_contig109526.1997.1 ID=prot_M-pyrifera_M_contig109526.1997.1|Name=mRNA_M-pyrifera_M_contig109526.1997.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=201bp CAVVKNSVLAHTSQILPINFNGGQVVAGNAGDQTAMVLQNLDYLLGKVDAback to top mRNA from alignment at M-pyrifera_M_contig109526:2..604+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109526.1997.1 ID=mRNA_M-pyrifera_M_contig109526.1997.1|Name=mRNA_M-pyrifera_M_contig109526.1997.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=603bp|location=Sequence derived from alignment at M-pyrifera_M_contig109526:2..604+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109526:2..604+ >mRNA_M-pyrifera_M_contig109526.1997.1 ID=mRNA_M-pyrifera_M_contig109526.1997.1|Name=mRNA_M-pyrifera_M_contig109526.1997.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1206bp|location=Sequence derived from alignment at M-pyrifera_M_contig109526:2..604+ (Macrocystis pyrifera P11B4 male)back to top |