prot_M-pyrifera_M_contig85630.19966.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85630.19966.1
Unique Nameprot_M-pyrifera_M_contig85630.19966.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length252
Homology
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BLAST of mRNA_M-pyrifera_M_contig85630.19966.1 vs. uniprot
Match: A0A517PM68_9PLAN (Internalin-A n=1 Tax=Gimesia chilikensis TaxID=2605989 RepID=A0A517PM68_9PLAN)

HSP 1 Score: 387 bits (995), Expect = 1.300e-128
Identity = 240/241 (99.59%), Postives = 241/241 (100.00%), Query Frame = 0 
Query:   12 IYPHYDITMGDEGFAGLETLTGLKELFVREYTLSDVTVLRLAPLKRLRQLDLSIGDLNSEDCLSVLSELTELESLYFRCNTKLSERVLDYLSGLKQLQSLSLHIDQGDGDGFQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKSGARKLAEQLPDVTIILNNALVKTPRKTITCHRCVIHDNASVLVPASWTGTSNHASYYLNVREDGWDKILSWSGQLRPLEFNLY 252
            IYP+YDITMGDEGFAGLETLTGLKELFVREYTLSDVTVLRLAPLKRLRQLDLSIGDLNSEDCLSVLSELTELESLYFRCNTKLSERVLDYLSGLKQLQSLSLHIDQGDGDGFQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKSGARKLAEQLPDVTIILNNALVKTPRKTITCHRCVIHDNASVLVPASWTGTSNHASYYLNVREDGWDKILSWSGQLRPLEFNLY
Sbjct:  310 IYPYYDITMGDEGFAGLETLTGLKELFVREYTLSDVTVLRLAPLKRLRQLDLSIGDLNSEDCLSVLSELTELESLYFRCNTKLSERVLDYLSGLKQLQSLSLHIDQGDGDGFQHXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVTKSGARKLAEQLPDVTIILNNALVKTPRKTITCHRCVIHDNASVLVPASWTGTSNHASYYLNVREDGWDKILSWSGQLRPLEFNLY 550
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85630.19966.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A517PM68_9PLAN1.300e-12899.59Internalin-A n=1 Tax=Gimesia chilikensis TaxID=260... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 1..205
e-value: 5.3E-21
score: 76.5
NoneNo IPR availablePANTHERPTHR13318UNCHARACTERIZEDcoord: 70..175
NoneNo IPR availablePANTHERPTHR13318:SF98coord: 70..175
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 5..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85630contigM-pyrifera_M_contig85630:3..758 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85630.19966.1mRNA_M-pyrifera_M_contig85630.19966.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85630 3..758 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85630.19966.1 ID=prot_M-pyrifera_M_contig85630.19966.1|Name=mRNA_M-pyrifera_M_contig85630.19966.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=252bp
LAGWTHLEHLEIYPHYDITMGDEGFAGLETLTGLKELFVREYTLSDVTVL
RLAPLKRLRQLDLSIGDLNSEDCLSVLSELTELESLYFRCNTKLSERVLD
YLSGLKQLQSLSLHIDQGDGDGFQHLAGLEDLEFLEVGGNAFNNRAIQYL
APLKNLKTINAQGSAVTKSGARKLAEQLPDVTIILNNALVKTPRKTITCH
RCVIHDNASVLVPASWTGTSNHASYYLNVREDGWDKILSWSGQLRPLEFN
LY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR032675LRR_dom_sf