prot_M-pyrifera_M_contig85610.19961.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85610.19961.1
Unique Nameprot_M-pyrifera_M_contig85610.19961.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length90
Homology
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Match: A0A8C5AFW6_GADMO (40S ribosomal protein S27 n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5AFW6_GADMO)

HSP 1 Score: 138 bits (348), Expect = 5.400e-41
Identity = 63/84 (75.00%), Postives = 72/84 (85.71%), Query Frame = 0
Query:    7 LQAASYVTDLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCLQITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK 90
            +QA     DLLHP P  EKR HKKKRLVQSPNS+FMDV+CPGC +ITTVFSHAQTVV+C GC+T+LCQPTGG+ARLTEG SFR+
Sbjct:    1 MQATRLAKDLLHPTPEEEKRRHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRR 84          
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Match: A0A0U2VE42_9MAXI (40S ribosomal protein S27 n=2 Tax=Neocopepoda TaxID=116569 RepID=A0A0U2VE42_9MAXI)

HSP 1 Score: 137 bits (345), Expect = 1.420e-40
Identity = 63/76 (82.89%), Postives = 68/76 (89.47%), Query Frame = 0
Query:   15 DLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCLQITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK 90
            DLLHP PA EKR HK KRLVQ PNS+FMDV+CPGC +ITTVFSHAQTVVVC GC+T+LCQPTGGRARLTEG SFRK
Sbjct:    6 DLLHPQPAEEKRKHKLKRLVQHPNSYFMDVKCPGCYRITTVFSHAQTVVVCAGCSTVLCQPTGGRARLTEGCSFRK 81          
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Match: A0A6P8UJS9_GYMAC (40S ribosomal protein S27 n=18 Tax=Bilateria TaxID=33213 RepID=A0A6P8UJS9_GYMAC)

HSP 1 Score: 137 bits (344), Expect = 2.020e-40
Identity = 61/76 (80.26%), Postives = 69/76 (90.79%), Query Frame = 0
Query:   15 DLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCLQITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK 90
            DLLHP P  EKR HKKKRLVQSPNS+FMDV+CPGC +ITTVFSHAQTVV+C GC+T+LCQPTGG+ARLTEG SFR+
Sbjct:    6 DLLHPSPEEEKRTHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRR 81          
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Match: H2YUI4_CIOSA (40S ribosomal protein S27 n=1 Tax=Ciona savignyi TaxID=51511 RepID=H2YUI4_CIOSA)

HSP 1 Score: 137 bits (344), Expect = 2.020e-40
Identity = 62/76 (81.58%), Postives = 69/76 (90.79%), Query Frame = 0
Query:   15 DLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCLQITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK 90
            DLLHP P  EKR HKKKRLVQSPNS+FMDV+CPGC +ITTVFSHAQTVV+C GC+T+LCQPTGGRARLTEG SFR+
Sbjct:    6 DLLHPSPEEEKRRHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGRARLTEGCSFRR 81          
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Match: A0A3B3X6K5_9TELE (40S ribosomal protein S27 n=1 Tax=Poecilia mexicana TaxID=48701 RepID=A0A3B3X6K5_9TELE)

HSP 1 Score: 137 bits (345), Expect = 2.030e-40
Identity = 62/85 (72.94%), Postives = 73/85 (85.88%), Query Frame = 0
Query:    6 SLQAASYVTDLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCLQITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK 90
            +L+  +   DLLHP P  EKR HKKKRLVQSPNS+FMDV+CPGC +ITTVFSHAQTVV+C GC+T+LCQPTGG+ARLTEG SFR+
Sbjct:    9 TLKTLTLAKDLLHPSPEEEKRRHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRR 93          
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Match: A0A3Q2QLN4_FUNHE (40S ribosomal protein S27 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2QLN4_FUNHE)

HSP 1 Score: 137 bits (344), Expect = 2.080e-40
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 0
Query:   10 ASYVTDLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCLQITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK 90
            +S   DLLHP P  EKR HKKKRLVQSPNS+FMDV+CPGC +ITTVFSHAQTVV+C GC+T+LCQPTGG+ARLTEG SFR+
Sbjct:    2 SSLAKDLLHPSPEEEKRRHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRR 82          
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Match: A0A8C6WGH2_9GOBI (40S ribosomal protein S27 n=1 Tax=Neogobius melanostomus TaxID=47308 RepID=A0A8C6WGH2_9GOBI)

HSP 1 Score: 137 bits (345), Expect = 2.290e-40
Identity = 63/87 (72.41%), Postives = 72/87 (82.76%), Query Frame = 0
Query:    4 FSSLQAASYVTDLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCLQITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK 90
            F+    A    DLLHP P  EKR HKKKRLVQSPNS+FMDV+CPGC +ITTVFSHAQTVV+C GC+T+LCQPTGG+ARLTEG SFR+
Sbjct:   11 FAIFFVAQLAKDLLHPSPEEEKRRHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRR 97          
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Match: A0A3Q2QN58_FUNHE (40S ribosomal protein S27 n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2QN58_FUNHE)

HSP 1 Score: 137 bits (344), Expect = 2.630e-40
Identity = 63/84 (75.00%), Postives = 71/84 (84.52%), Query Frame = 0
Query:    7 LQAASYVTDLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCLQITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK 90
            LQ      DLLHP P  EKR HKKKRLVQSPNS+FMDV+CPGC +ITTVFSHAQTVV+C GC+T+LCQPTGG+ARLTEG SFR+
Sbjct:    7 LQNVILAKDLLHPSPEEEKRRHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRR 90          
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Match: A0A3P8UK71_CYNSE (40S ribosomal protein S27 n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3P8UK71_CYNSE)

HSP 1 Score: 137 bits (345), Expect = 3.090e-40
Identity = 63/82 (76.83%), Postives = 71/82 (86.59%), Query Frame = 0
Query:    9 AASYVTDLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCLQITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK 90
            AAS   DLLHP P  EKR HKKKRLVQ PNS+FMDV+CPGC +ITTVFSHAQTVV+C GC+T+LCQPTGG+ARLTEG SFR+
Sbjct:   26 AASLAKDLLHPTPEEEKRRHKKKRLVQCPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRR 107          
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Match: A0A672KZX7_SINGR (40S ribosomal protein S27 n=1 Tax=Sinocyclocheilus grahami TaxID=75366 RepID=A0A672KZX7_SINGR)

HSP 1 Score: 136 bits (343), Expect = 3.520e-40
Identity = 62/81 (76.54%), Postives = 71/81 (87.65%), Query Frame = 0
Query:   10 ASYVTDLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCLQITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK 90
            +S   DLLHP P  EKR HKKKRLVQSPNS+FMDV+CPGC +ITTVFSHAQTVV+C GC+T+LCQPTGG+ARLTEG SFR+
Sbjct:    8 SSLAKDLLHPTPEEEKRRHKKKRLVQSPNSYFMDVKCPGCYKITTVFSHAQTVVLCVGCSTVLCQPTGGKARLTEGCSFRR 88          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85610.19961.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8C5AFW6_GADMO5.400e-4175.0040S ribosomal protein S27 n=1 Tax=Gadus morhua Tax... [more]
A0A0U2VE42_9MAXI1.420e-4082.8940S ribosomal protein S27 n=2 Tax=Neocopepoda TaxI... [more]
A0A6P8UJS9_GYMAC2.020e-4080.2640S ribosomal protein S27 n=18 Tax=Bilateria TaxID... [more]
H2YUI4_CIOSA2.020e-4081.5840S ribosomal protein S27 n=1 Tax=Ciona savignyi T... [more]
A0A3B3X6K5_9TELE2.030e-4072.9440S ribosomal protein S27 n=1 Tax=Poecilia mexican... [more]
A0A3Q2QLN4_FUNHE2.080e-4076.5440S ribosomal protein S27 n=1 Tax=Fundulus heteroc... [more]
A0A8C6WGH2_9GOBI2.290e-4072.4140S ribosomal protein S27 n=1 Tax=Neogobius melano... [more]
A0A3Q2QN58_FUNHE2.630e-4075.0040S ribosomal protein S27 n=1 Tax=Fundulus heteroc... [more]
A0A3P8UK71_CYNSE3.090e-4076.8340S ribosomal protein S27 n=2 Tax=Percomorphaceae ... [more]
A0A672KZX7_SINGR3.520e-4076.5440S ribosomal protein S27 n=1 Tax=Sinocyclocheilus... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000592Ribosomal protein S27ePFAMPF01667Ribosomal_S27ecoord: 37..89
e-value: 2.4E-25
score: 88.0
IPR000592Ribosomal protein S27ePANTHERPTHR1159440S RIBOSOMAL PROTEIN S27coord: 15..89
IPR000592Ribosomal protein S27ePROSITEPS01168RIBOSOMAL_S27Ecoord: 45..77
IPR000592Ribosomal protein S27eHAMAPMF_00371Ribosomal_S27ecoord: 31..89
score: 16.156
NoneNo IPR availableGENE3D2.20.25.640coord: 13..90
e-value: 5.1E-43
score: 146.9
NoneNo IPR availablePRODOMPD004466coord: 53..90
e-value: 9.0E-13
score: 172.0
IPR011332Zinc-binding ribosomal proteinSUPERFAMILY57829Zn-binding ribosomal proteinscoord: 37..89

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85610contigM-pyrifera_M_contig85610:2..271 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85610.19961.1mRNA_M-pyrifera_M_contig85610.19961.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85610 2..271 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85610.19961.1 ID=prot_M-pyrifera_M_contig85610.19961.1|Name=mRNA_M-pyrifera_M_contig85610.19961.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=90bp
MALFSSLQAASYVTDLLHPDPAVEKRVHKKKRLVQSPNSFFMDVRCPGCL
QITTVFSHAQTVVVCPGCATMLCQPTGGRARLTEGSSFRK
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000592Ribosomal_S27e
IPR011332Ribosomal_zn-bd