mRNA_M-pyrifera_M_contig85602.19958.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Match: A0A517W3Y4_9PLAN (Uncharacterized protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W3Y4_9PLAN) HSP 1 Score: 60.5 bits (145), Expect = 4.760e-10 Identity = 27/62 (43.55%), Postives = 44/62 (70.97%), Query Frame = 1 Query: 4 LDESVIRWLVVLSIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRHPVVRIVILIAKN 189 L ++ WL V S+ TF+ T++++P+L+VR+P DYF+R+ R + RHPVVR+++L KN Sbjct: 3 LSTELLGWLAVASVITFIGTIIMIPILVVRIPVDYFMRKERGSLPWASRHPVVRVILLTGKN 64
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Match: A0A1G3C8H6_9BACT (Uncharacterized protein n=2 Tax=unclassified Planctomycetes TaxID=473814 RepID=A0A1G3C8H6_9BACT) HSP 1 Score: 60.1 bits (144), Expect = 6.720e-10 Identity = 32/60 (53.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 10 ESVIRWLVVLSIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRHPVVRIVILIAKN 189 E+V+ WL V SI TFV TL++VP L+VR+PSDYF R+ S HPVV+ ++LI KN Sbjct: 9 ENVLWWLAVASIITFVSTLIVVPKLVVRIPSDYFSHRERNRMPYSDHHPVVQGILLIGKN 68
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Match: A0A2H6G182_9BACT (Uncharacterized protein n=2 Tax=Bacteria TaxID=2 RepID=A0A2H6G182_9BACT) HSP 1 Score: 60.5 bits (145), Expect = 6.770e-10 Identity = 29/61 (47.54%), Postives = 44/61 (72.13%), Query Frame = 1 Query: 7 DESVIRWLVVLSIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRHPVVRIVILIAKN 189 +E+++ WL+ S ATF ++L++VP+L+VR+PSDYF + R P K PV+RI+ LI KN Sbjct: 16 NETIVWWLLASSAATFFVSLILVPMLVVRIPSDYFTHKKRHPKRPEKYPPVIRIIALILKN 76
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Match: UPI0003FAC313 (transmembrane protein (PGPGW) n=1 Tax=Desulfomicrobium escambiense TaxID=29503 RepID=UPI0003FAC313) HSP 1 Score: 58.2 bits (139), Expect = 4.150e-9 Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 25 WLVVLSIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRHPVVRIVILIAKN 189 WL +S TFV +L +VP+L VR+P+DYF R+ R P+ +RHPV+R+ +L+ KN Sbjct: 11 WLAAVSAVTFVGSLAVVPMLAVRIPADYFRRDRRGPTPWRRRHPVLRLAVLVLKN 65
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Match: A0A496X8G1_9GAMM (Uncharacterized protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A496X8G1_9GAMM) HSP 1 Score: 57.4 bits (137), Expect = 7.950e-9 Identity = 26/60 (43.33%), Postives = 41/60 (68.33%), Query Frame = 1 Query: 10 ESVIRWLVVLSIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRHPVVRIVILIAKN 189 + WL V+S+ TFV +L+ +P L+ R+P DYF+ E R P+ + K HP++R+ +LI KN Sbjct: 9 QEAFAWLAVISLCTFVFSLLSLPWLVARIPEDYFLYEKRHPAPLKKSHPLIRMTLLIGKN 68
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Match: A0A355EMJ1_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A355EMJ1_9DELT) HSP 1 Score: 57.0 bits (136), Expect = 1.080e-8 Identity = 28/60 (46.67%), Postives = 40/60 (66.67%), Query Frame = 1 Query: 10 ESVIRWLVVLSIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRHPVVRIVILIAKN 189 E++ WL SI FV +L++VP +VR+PSDYF R L + +HPVVR V+++AKN Sbjct: 9 EAIFAWLTAASIVVFVASLILVPFFIVRIPSDYFARGKGHRKLWADQHPVVRGVLMVAKN 68
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Match: A0A1W9LJI7_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium A6 TaxID=1934249 RepID=A0A1W9LJI7_9DELT) HSP 1 Score: 56.6 bits (135), Expect = 1.520e-8 Identity = 29/60 (48.33%), Postives = 42/60 (70.00%), Query Frame = 1 Query: 10 ESVIRWLVVLSIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRHPVVRIVILIAKN 189 E ++ WLV +S+ TFV TL VP+L+V++PSDYF R +L + RH VR ++L+AKN Sbjct: 9 EVILWWLVAVSVITFVSTLAAVPLLVVKIPSDYFAHGSRTGALWADRHAAVRWMLLLAKN 68
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Match: A0A847BYM3_9DELT (Uncharacterized protein n=1 Tax=Desulfuromonadaceae bacterium TaxID=2099677 RepID=A0A847BYM3_9DELT) HSP 1 Score: 56.6 bits (135), Expect = 1.670e-8 Identity = 27/55 (49.09%), Postives = 40/55 (72.73%), Query Frame = 1 Query: 25 WLVVLSIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRHPVVRIVILIAKN 189 WL LS+ TF+++L++VPVL+VR+P DYF + R +L RHP+VRI+ + KN Sbjct: 13 WLAPLSLLTFLVSLLLVPVLVVRIPRDYFTHQERPATLWRHRHPLVRILFVAVKN 67
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Match: UPI0003B611DE (hypothetical protein n=1 Tax=Leucothrix mucor TaxID=45248 RepID=UPI0003B611DE) HSP 1 Score: 56.2 bits (134), Expect = 2.070e-8 Identity = 29/59 (49.15%), Postives = 44/59 (74.58%), Query Frame = 1 Query: 22 RWLVVL---SIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRHPVVRIVILIAKN 189 +W+V+L S+ATFVLTL++VP++++R+P DYF +R S S+ HPV+R +LI KN Sbjct: 9 QWVVILGLVSLATFVLTLLLVPLIVIRIPEDYFRDSYRHKSQWSEYHPVLRFCLLILKN 67
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Match: A0A517ZC12_9PLAN (Transmembrane protein (PGPGW) n=1 Tax=Maioricimonas rarisocia TaxID=2528026 RepID=A0A517ZC12_9PLAN) HSP 1 Score: 56.6 bits (135), Expect = 2.150e-8 Identity = 31/62 (50.00%), Postives = 40/62 (64.52%), Query Frame = 1 Query: 4 LDESVIRWLVVLSIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRHPVVRIVILIAKN 189 LD + W+V LS+ TF TL+ +PVLLVR+P+DYF+R P HP+VR I IAKN Sbjct: 7 LDPGLAWWVVSLSVLTFFGTLLAIPVLLVRMPADYFLRTSPPPDSFRAEHPLVRWAIRIAKN 68 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85602.19958.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85602.19958.1 >prot_M-pyrifera_M_contig85602.19958.1 ID=prot_M-pyrifera_M_contig85602.19958.1|Name=mRNA_M-pyrifera_M_contig85602.19958.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=64bp MLDESVIRWLVVLSIATFVLTLVIVPVLLVRLPSDYFVREHRDPSLMSKRback to top mRNA from alignment at M-pyrifera_M_contig85602:670..861+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85602.19958.1 ID=mRNA_M-pyrifera_M_contig85602.19958.1|Name=mRNA_M-pyrifera_M_contig85602.19958.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=192bp|location=Sequence derived from alignment at M-pyrifera_M_contig85602:670..861+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85602:670..861+ >mRNA_M-pyrifera_M_contig85602.19958.1 ID=mRNA_M-pyrifera_M_contig85602.19958.1|Name=mRNA_M-pyrifera_M_contig85602.19958.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=384bp|location=Sequence derived from alignment at M-pyrifera_M_contig85602:670..861+ (Macrocystis pyrifera P11B4 male)back to top |