mRNA_M-pyrifera_M_contig109523.1995.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Match: A0A7V9A5B3_9BACT (Uncharacterized protein n=1 Tax=Bremerella alba TaxID=980252 RepID=A0A7V9A5B3_9BACT) HSP 1 Score: 157 bits (396), Expect = 5.400e-48 Identity = 73/73 (100.00%), Postives = 73/73 (100.00%), Query Frame = 1
Query: 1 MTKYSFGLLLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET 219
MTKYSFGLLLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET
Sbjct: 1 MTKYSFGLLLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET 73
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Match: UPI001CCED36A (hypothetical protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCED36A) HSP 1 Score: 119 bits (298), Expect = 4.780e-33 Identity = 52/73 (71.23%), Postives = 62/73 (84.93%), Query Frame = 1
Query: 1 MTKYSFGLLLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET 219
+TK+S LLL VF CT T+GCGPGGPPSG+V G+VTY DKPL TGT++L+PE+EG+ YAQGTIQPDGTY ET
Sbjct: 3 VTKHSIALLLFVFACTVTIGCGPGGPPSGQVIGNVTYKDKPLPTGTIMLIPEKEGMPYAQGTIQPDGTYHVET 75
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Match: UPI001CCDFFD4 (hypothetical protein n=1 Tax=Bremerella volcania TaxID=2527984 RepID=UPI001CCDFFD4) HSP 1 Score: 75.1 bits (183), Expect = 1.180e-15 Identity = 34/65 (52.31%), Postives = 42/65 (64.62%), Query Frame = 1
Query: 25 LLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET 219
L F T VGCG GP G VTG+VTY KPL TGT+ +PE++G+ A +Q DGT+QAET
Sbjct: 9 LSLAFAVTTMVGCGSSGPEMGDVTGTVTYKGKPLPTGTITFIPEEDGIPRASAEVQEDGTFQAET 73
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Match: A4A1R0_9BACT (Uncharacterized protein n=2 Tax=Blastopirellula marina TaxID=124 RepID=A4A1R0_9BACT) HSP 1 Score: 65.9 bits (159), Expect = 5.370e-12 Identity = 33/72 (45.83%), Postives = 43/72 (59.72%), Query Frame = 1
Query: 4 TKYSFGLLLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET 219
+K GL++ V +GCG GP G VTG+VT+ KPL TGT+ +PE+EGL A IQ DG Y+ T
Sbjct: 7 SKLILGLIVASLVTH--LGCGAHGPEMGDVTGTVTFQGKPLHTGTITFIPEEEGLPLAYAEIQADGAYEGFT 76
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Match: A0A5C5VA30_9BACT (Uncharacterized protein n=1 Tax=Blastopirellula retiformator TaxID=2527970 RepID=A0A5C5VA30_9BACT) HSP 1 Score: 64.3 bits (155), Expect = 2.010e-11 Identity = 34/72 (47.22%), Postives = 41/72 (56.94%), Query Frame = 1
Query: 7 KYSFGLLLCVFVCTF-TVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET 219
KYS + V T +VGCG GP G V GSVTY KPL TGT+ +PE G+ A I+ DGTY+ T
Sbjct: 2 KYSTLATMVVAAATIASVGCGARGPEMGDVVGSVTYQGKPLPTGTITFMPETAGVPTAYANIKDDGTYEGYT 73
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Match: A0A517SM90_9PLAN (Uncharacterized protein n=1 Tax=Caulifigura coniformis TaxID=2527983 RepID=A0A517SM90_9PLAN) HSP 1 Score: 58.9 bits (141), Expect = 2.960e-9 Identity = 31/66 (46.97%), Postives = 40/66 (60.61%), Query Frame = 1
Query: 22 LLLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET 219
LLL + +C GCG P VTG+VT+ND+P+ TG+V+ VP+ G AQGTI DG Y T
Sbjct: 4 LLLSLVLCGLLAGCGETTAPVYHVTGTVTFNDQPITTGSVVFVPKGGGP-TAQGTIGADGKYSLTT 68
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Match: A4A1R2_9BACT (Uncharacterized protein n=2 Tax=Blastopirellula marina TaxID=124 RepID=A4A1R2_9BACT) HSP 1 Score: 57.0 bits (136), Expect = 8.530e-9 Identity = 28/45 (62.22%), Postives = 31/45 (68.89%), Query Frame = 1
Query: 85 GKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET 219
G V G+VTY KPL TGTV VPE+EGL A IQ DGTY+A T
Sbjct: 2 GHVFGTVTYEGKPLPTGTVSFVPEKEGLPMAYAQIQADGTYEAST 46
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Match: A6C5X0_9PLAN (Uncharacterized protein n=3 Tax=Gimesia maris TaxID=122 RepID=A6C5X0_9PLAN) HSP 1 Score: 54.7 bits (130), Expect = 3.030e-7 Identity = 28/65 (43.08%), Postives = 40/65 (61.54%), Query Frame = 1
Query: 25 LLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET 219
L C+ + T T GCG G P V+G+++YN KPL G+++ VP + G AQG ++ DG Y ET
Sbjct: 57 LFCLIIVTMT-GCGDGHPARSPVSGTISYNGKPLKIGSLLFVPVKGGPP-AQGKVRGDGFYVMET 119
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Match: A0A517Q3M5_9PLAN (Uncharacterized protein n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q3M5_9PLAN) HSP 1 Score: 53.1 bits (126), Expect = 7.130e-7 Identity = 29/64 (45.31%), Postives = 37/64 (57.81%), Query Frame = 1
Query: 16 FGLLLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTY 207
FGLL+ V+ GCG G P VTG+V+YN KPL G+++ +P G AQG I DG Y
Sbjct: 23 FGLLISVW------GCGDGHPARSPVTGTVSYNGKPLSIGSLVFIPVSGGPP-AQGKIDRDGNY 79
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Match: A0A517RCJ1_9PLAN (Uncharacterized protein n=1 Tax=Gimesia alba TaxID=2527973 RepID=A0A517RCJ1_9PLAN) HSP 1 Score: 52.4 bits (124), Expect = 1.420e-6 Identity = 29/66 (43.94%), Postives = 39/66 (59.09%), Query Frame = 1
Query: 22 LLLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVPEQEGLGYAQGTIQPDGTYQAET 219
+LLC F+ T GCG G P VTG+V+YN KPL G+++ +P G AQG I +G Y+ T
Sbjct: 21 ILLC-FILLSTWGCGDGHPKRSLVTGTVSYNGKPLSIGSLVFIPVGGGPP-AQGKINREGFYEMGT 84 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109523.1995.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 17
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109523.1995.1 >prot_M-pyrifera_M_contig109523.1995.1 ID=prot_M-pyrifera_M_contig109523.1995.1|Name=mRNA_M-pyrifera_M_contig109523.1995.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=73bp MTKYSFGLLLCVFVCTFTVGCGPGGPPSGKVTGSVTYNDKPLMTGTVILVback to top mRNA from alignment at M-pyrifera_M_contig109523:385..603+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109523.1995.1 ID=mRNA_M-pyrifera_M_contig109523.1995.1|Name=mRNA_M-pyrifera_M_contig109523.1995.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=219bp|location=Sequence derived from alignment at M-pyrifera_M_contig109523:385..603+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109523:385..603+ >mRNA_M-pyrifera_M_contig109523.1995.1 ID=mRNA_M-pyrifera_M_contig109523.1995.1|Name=mRNA_M-pyrifera_M_contig109523.1995.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=438bp|location=Sequence derived from alignment at M-pyrifera_M_contig109523:385..603+ (Macrocystis pyrifera P11B4 male)back to top |