mRNA_M-pyrifera_M_contig85559.19946.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85559.19946.1
Unique NamemRNA_M-pyrifera_M_contig85559.19946.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Match: A0A2E0RSR8_9ACTN (Heme ABC transporter ATP-binding protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E0RSR8_9ACTN)

HSP 1 Score: 400 bits (1027), Expect = 1.120e-134
Identity = 220/288 (76.39%), Postives = 234/288 (81.25%), Query Frame = 1
Query:    1 VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVGRAISETARREPGTIAD-PATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDGNGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYATALVRPMDLADNVELGRGGWWRARRRARQRAVGALLRHWDVRSAGAAARVRSLSGGNAQKLVLARELEQSPALVITCHPTRGLGPGA 861
            VGEQQRLEILRALDADA VLLLDEPTAVLTG EATALL VCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDG VVLADA VA+H+A+ LADAMVGR + +   REP T AD  A  ARL VD VS GVL              VAGVDGNGQAELEAVLAA+ +P +G VTLDG ++  GRPRERI R +AYIPSDRYATALVRPM LADNVELGRGGWWR RR+ RQRAV   L  WDVRSAGAAA VRSLSGGNAQKLVLAREL++ P LVITCHPTRGL PGA
Sbjct:  150 VGEQQRLEILRALDADAGVLLLDEPTAVLTGAEATALLGVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGSVVLADATVAEHSAAGLADAMVGREMGDARHREPTTTADGDARPARLRVDGVSSGVLRGXXXXXXXXXXXXVAGVDGNGQAELEAVLAAIVVPESGRVTLDGEELPHGRPRERIGRRVAYIPSDRYATALVRPMSLADNVELGRGGWWRPRRQVRQRAVEDRLARWDVRSAGAAAAVRSLSGGNAQKLVLARELDEVPDLVITCHPTRGLDPGA 437          
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Match: A0A6B1EGH5_9ACTN (ATP-binding cassette domain-containing protein n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1EGH5_9ACTN)

HSP 1 Score: 285 bits (728), Expect = 7.030e-90
Identity = 166/289 (57.44%), Postives = 201/289 (69.55%), Query Frame = 1
Query:    1 VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVGRAISET--ARREPGTIADPATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDGNGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYATALVRPMDLADNVELGRGGWWRARRRARQRAVGALLRHWDVRSAGAAARVRSLSGGNAQKLVLARELEQSPALVITCHPTRGLGPGA 861
            VGE+QRLEILRALDADA +LLLDEPTAVLT  EA  LL V R LAD+GRA+V+ITHRL+EV + CDRVTVLR+G   ++D AV  +T + LA AM+G   S T  AR    T A P     L V  VS G +  +S  V  GE++G+AGVDGNGQ+ELEA L+      +G V++ G  I PG PR R  +G+AYIPSDRY+  L+ PMDLADN+ELGR    R  R AR +A    L HWDVR+AG  AR  SLSGGNAQKLVLAREL++ P+ V+ C+PTRGL P A
Sbjct:  136 VGERQRLEILRALDADAKILLLDEPTAVLTDVEAERLLGVARALADQGRALVVITHRLAEV-EACDRVTVLREGIEAISDGAVDGYTRADLASAMIGTDTSGTITARTSRRTQAAPVC---LRVRDVSLGRVSSLSLDVGEGEIVGIAGVDGNGQSELEAALSGRSAAESGEVSISGEPIAPGDPRSRRGQGLAYIPSDRYSWGLIGPMDLADNLELGRVLPIRPNRPARHKAARPSLDHWDVRTAGPHARTSSLSGGNAQKLVLARELDEHPSAVLACYPTRGLDPEA 420          
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Match: A0A6V8KZG4_9ACTN (Sugar ABC transporter n=2 Tax=Phytohabitans rumicis TaxID=1076125 RepID=A0A6V8KZG4_9ACTN)

HSP 1 Score: 280 bits (717), Expect = 2.660e-88
Identity = 162/293 (55.29%), Postives = 190/293 (64.85%), Query Frame = 1
Query:    1 VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVGRAISETA------RREPGTIADPATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDGNGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYATALVRPMDLADNVELGRGGWWRARRRARQRAVGALLRHWDVRSAGAAARVRSLSGGNAQKLVLARELEQSPALVITCHPTRGLGPGA 861
            VGEQQRLE++RALDADA +L+LDEPTAVL   EA  LL+VCRRLA+EGRAVVIITHRL EV  GCDRVTVLR G V L    V DH  + LA  MVG + ++                                       +VAGGE++G+AGVDGNGQA+LEA+LA +     GT+TLDG  +  G PR R+R G+AYIPSDRY  AL  PM LADN+ELGRG   R  RR R R +  +LR WDVR+AG AAR  +LSGGNAQKLVLAREL   P LV+  +PTRGL P A
Sbjct:  136 VGEQQRLELIRALDADARLLILDEPTAVLVDAEAERLLSVCRRLAEEGRAVVIITHRLGEVFTGCDRVTVLRRGQVALGGTPVRDHDRAGLARLMVGASPADAPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLAVAGGEIVGMAGVDGNGQADLEALLAGLAAATAGTLTLDGEPLPVGDPRRRVRAGVAYIPSDRYRHALAGPMSLADNLELGRGHRVRPARRRRDRLLAPVLRRWDVRTAGPAARASTLSGGNAQKLVLARELAGEPRLVVAAYPTRGLDPDA 428          
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Match: A0A543FW91_9PSEU (Nucleoside ABC transporter ATP-binding protein n=3 Tax=Pseudonocardia TaxID=1847 RepID=A0A543FW91_9PSEU)

HSP 1 Score: 280 bits (715), Expect = 5.030e-88
Identity = 166/289 (57.44%), Postives = 195/289 (67.47%), Query Frame = 1
Query:    1 VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVGRAISE--TARREPGTIADPATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDGNGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYATALVRPMDLADNVELGRGGWWRARRRARQRAVGALLRHWDVRSAGAAARVRSLSGGNAQKLVLARELEQSPALVITCHPTRGLGPGA 861
            VGE+QRLEILRALDADA +L+LDEPTAVL   EA  LL VCR LA++GRA+VIITHRLSEV  GCDRVTVLR G VV A   V+ H  ++LA  MVG A +E  TARR     AD   + RL +D  + G L  +   V  GEVLGVAGVDGNGQAELE +LA +  P  G+VT+DG  +  G PRERI   IAY+P+DR+  AL  P+ LADN+ELGRG   R     R+     +L  WDVR +G +A   SLSGGNAQKLVLAREL   P LV+   PTRGL P A
Sbjct:  143 VGEEQRLEILRALDADARLLILDEPTAVLVDAEAEKLLGVCRALAEDGRAIVIITHRLSEVFAGCDRVTVLRRGSVVCAGEPVSRHDRASLATLMVGSAPAELSTARRS----ADG--EVRLRLDGAARGRLQPLDLHVRAGEVLGVAGVDGNGQAELEELLAGIAAPDAGSVTVDGIPVPVGAPRERIADRIAYVPADRHRRALAGPLTLADNLELGRGDRRRPPVARREERAAPVLEEWDVRGSGPSAPAASLSGGNAQKLVLARELAAGPRLVVAAQPTRGLDPEA 425          
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Match: UPI001E59E199 (ATP-binding cassette domain-containing protein n=1 Tax=Pseudonocardia sp. TRM90224 TaxID=2812678 RepID=UPI001E59E199)

HSP 1 Score: 279 bits (714), Expect = 6.910e-88
Identity = 169/288 (58.68%), Postives = 190/288 (65.97%), Query Frame = 1
Query:    1 VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVG-RAISETARREPGTIADPATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDGNGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYATALVRPMDLADNVELGRGGWWRARRRARQRAVGALLRHWDVRSAGAAARVRSLSGGNAQKLVLARELEQSPALVITCHPTRGLGPGA 861
            VGEQQRLEILRALDADA +L+LDEPTAVL   EA ALL VCR LA + RAVVIITHRL EV  G DRVTVLR G VV A   VADH  ++LA+ MVG  A + TAR      A     +RL V+  +   L  +   V  GEVLG+AGVDGNGQAELE +LA V  P  GTVT+DG  +  G PRERI R IAY+PSDRY  AL  P+ LADN+ELGRG   R  R  R      +L  WDVR AG       LSGGNAQKLVLAREL  +P LV+  HPTRGL P A
Sbjct:  142 VGEQQRLEILRALDADARLLILDEPTAVLVDDEADALLDVCRGLAADDRAVVIITHRLREVFAGADRVTVLRRGAVVCAGEPVADHDRASLANLMVGANATNGTARP-----ARHVEGSRLRVEGAALRRLRPLDLQVGAGEVLGIAGVDGNGQAELEELLAGVTAPDRGTVTVDGVPVPVGAPRERIARHIAYVPSDRYRYALAGPLSLADNLELGRGPSRRPTRARRWELAQPVLAEWDVRGAGPELAAGRLSGGNAQKLVLARELAGTPKLVVAAHPTRGLDPEA 424          
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Match: A0A1Q9SAE6_9PSEU (Uncharacterized protein n=1 Tax=Pseudonocardia sp. CNS-004 TaxID=1904967 RepID=A0A1Q9SAE6_9PSEU)

HSP 1 Score: 279 bits (713), Expect = 1.680e-87
Identity = 169/311 (54.34%), Postives = 198/311 (63.67%), Query Frame = 1
Query:    1 VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVGR------------AISETARREPGTIA---------DPATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDGNGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYATALVRPMDLADNVELGRGGWWR---ARRRARQRAVGALLRHWDVRSAGAAARVRSLSGGNAQKLVLARELEQSPALVITCHPTRGLGPGA 861
            VGE+QRLEILRALDADA +L+LDEPTAVL   EA  LL VCR LAD+GRA+VIITHRLSEV  GCDRVTVLR G VV A   V+ H  ++LA  MVG             + S T+R     ++         +PA    L +D    G L  +   V  GEVLGVAGVDGNGQ ELE +LA +  P  G+VT+DG  +  G PRER+  GIAY+P+DRY  AL  P+ LADN+ELGRG   R   ARRRAR   V  +L  WDVR +G +A   SLSGGNAQKLVLAREL   P LV+   PTRGL P A
Sbjct:  137 VGEEQRLEILRALDADARLLILDEPTAVLVDAEAETLLRVCRSLADDGRAIVIITHRLSEVFAGCDRVTVLRRGAVVCAGDPVSGHDRASLATLMVGENSPHRNAGPVPHSASPTSRHGESDVSARRLGHLRPEPADAVSLRLDGAGRGRLQPLDLEVRAGEVLGVAGVDGNGQFELEELLAGIAAPDRGSVTVDGTPVPVGAPRERVAEGIAYVPADRYRRALAGPLTLADNLELGRGDRHRPPAARRRAR---VEPVLAEWDVRGSGPSALASSLSGGNAQKLVLARELAAGPRLVVAAQPTRGLDPEA 444          
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Match: UPI000E3412FE (ATP-binding cassette domain-containing protein n=1 Tax=Desertimonas flava TaxID=2064846 RepID=UPI000E3412FE)

HSP 1 Score: 273 bits (699), Expect = 3.130e-85
Identity = 164/289 (56.75%), Postives = 192/289 (66.44%), Query Frame = 1
Query:    1 VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVGRAISETARREPGT--IADPATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDGNGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYATALVRPMDLADNVELGRGGWWRARRRARQRAVGALLRHWDVRSAGAAARVRSLSGGNAQKLVLARELEQSPALVITCHPTRGLGPGA 861
            VGEQQRLE++RALD D  VL+LDEPTAVLT  EA  LL VCR LADEGR+VV+I+HRL EV+ G DRVTVLR G VV+A   VA H   +L  AMVG    E      GT  +     + R+ +  V+ G L  +  SV  GEV+G+AGVDGNGQ ELEA+LA    P +GT  +DG  I  G PR RI  G+AYI +DRY  A+VR + +ADN++LGR  WWR R   R  A G  L  WDVR   AA R  SLSGGNAQKLVLARELE  PA+VI  HPTRGL PGA
Sbjct:  147 VGEQQRLEVVRALDHDPRVLVLDEPTAVLTDQEADRLLEVCRSLADEGRSVVMISHRLREVLAGADRVTVLRRGRVVVAGEPVAAHDRRSLVRAMVG---DELIPHSTGTGRVRRIGVE-RIRLSAVAAGRLDPIDLSVRAGEVVGIAGVDGNGQTELEAILAGRVAPVSGTAEIDGEPIPIGSPRRRIDEGVAYIAADRYRHAVVRELSVADNLDLGRTRWWRRRASRRISAAGPRLEAWDVRGERAA-RAGSLSGGNAQKLVLARELEHPPAVVIAGHPTRGLDPGA 430          
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Match: A0A4R7J8E8_9ACTN (Simple sugar transport system ATP-binding protein n=1 Tax=Naumannella halotolerans TaxID=993414 RepID=A0A4R7J8E8_9ACTN)

HSP 1 Score: 260 bits (665), Expect = 3.400e-80
Identity = 151/290 (52.07%), Postives = 186/290 (64.14%), Query Frame = 1
Query:    1 VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVGRAIS---ETARREPGTIADPATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDGNGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYATALVRPMDLADNVELGRGGWWRARRRARQRAVGALLRHWDVRSAGAAARVRSLSGGNAQKLVLARELEQSPALVITCHPTRGLGPGA 861
            VGE+QRLEILRALD++A VLLLDEPTAVL   E+  L+ +CR LA+EGRA++I+THRLSEV+   DR+TVLR G VVL       +T S LA AM+G A     + A   P     PA    L+V+ V+ G L D SF +  GE++G+AGVDGNGQAELE +L  +  P  G VT    +   G PR+R   GIAYIPSDR+  AL  P+ LADN+ELGRG  WRA +R R       L  WDVR          LSGGNAQK+VLARE+   P +V+  +PTRGL PGA
Sbjct:  147 VGERQRLEILRALDSEAQVLLLDEPTAVLVDAESVRLMKLCRELAEEGRAIMIVTHRLSEVMSTADRLTVLRQGRVVLQSDTPGRYTKSQLAKAMIGDAADSQIDRAHHRPRVDEKPAV---LSVESVTHGRLTDCSFDLHPGEIVGIAGVDGNGQAELETLLCRLATPDEGQVTWHERRFRAGHPRDRPLAGIAYIPSDRHQRALASPLSLADNLELGRGRPWRAAKRQRLAQWAEPLETWDVRGGTPRTPAGRLSGGNAQKVVLAREMAADPDVVVAAYPTRGLDPGA 433          
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Match: A0A7W0R0X9_9ACTN (ATP-binding cassette domain-containing protein n=1 Tax=Acidimicrobiia bacterium TaxID=2080302 RepID=A0A7W0R0X9_9ACTN)

HSP 1 Score: 240 bits (612), Expect = 3.240e-73
Identity = 153/293 (52.22%), Postives = 180/293 (61.43%), Query Frame = 1
Query:    1 VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVGRAISETARREPGT------IADPATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDGNGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYATALVRPMDLADNVELGRGGWWRARRRARQRAVGALLRHWDVRSAGAAARVRSLSGGNAQKLVLARELEQSPALVITCHPTRGLGPGA 861
            VGE+QRLE+LRALDAD +VLLLDEPTAVLT  EA   LAV RRLA++GRAVV+ITHRL EV+   DRV VLR+G VV   A V   T +TLA  MVG  +    R    T      I D     RL VD++           V  GEVLGVAGVDGNGQAELE  L ++  P +GT+ + GA +    PR+R+  GIAYIPSDR A ALV  M   DN+ LGR  W    R  R  + GA +  W ++ A      RSLSGGNAQKLV AREL   P +V+ C PTRGL P A
Sbjct:   98 VGERQRLELLRALDADPEVLLLDEPTAVLTDAEADRFLAVIRRLAEDGRAVVLITHRLREVVVAADRVAVLRNGIVVSPPAPVGSRTRATLAHEMVGAGLPPVGRTSTSTGRRVVEITDLRAG-RLTVDRLV----------VNAGEVLGVAGVDGNGQAELELALTSLVTPDSGTIEVGGADVCGLHPRQRVACGIAYIPSDRAARALVGSMRCDDNLALGRTTW----RIRRDPSAGARMAAWSIKGAPHHL-ARSLSGGNAQKLVAARELHGDPRVVVACQPTRGLDPAA 374          
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Match: A0A349B0E1_9ACTN (ABC transporter domain-containing protein (Fragment) n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A349B0E1_9ACTN)

HSP 1 Score: 212 bits (540), Expect = 3.770e-65
Identity = 124/222 (55.86%), Postives = 146/222 (65.77%), Query Frame = 1
Query:    1 VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRAVVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVGR-AISETARREPGTIADPATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDGNGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYATALVRPMDLADNVELGRGGWW 663
            VGEQQRLE+LRALDAD  VL+LDEPTA+LT  EAT LL VCR+LADEGR V+I+THR++EV    DRVTVLR G  VL D  V+  T   LA  MVG  A ++     P    D    ARLAV  ++ G L   SF+VA G VLG+AGVDGNGQAELE  LA      +GT+ +DG   +   P ER++ GIAYI SDRY   LV  +DLADNV LGR   W
Sbjct:    1 VGEQQRLEVLRALDADPQVLVLDEPTAMLTDAEATRLLDVCRQLADEGRCVLIVTHRMAEVSAAADRVTVLRSGRTVLHDEPVSGRTKQELARLMVGDDAPADRGVARPRFTGDSGVPARLAVHGLTVGGLRSASFAVAPGRVLGIAGVDGNGQAELEGALAGRLTAESGTIEIDGKATVLRTPAERVKAGIAYITSDRYRWGLVGDLDLADNVHLGRLPRW 222          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85559.19946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E0RSR8_9ACTN1.120e-13476.39Heme ABC transporter ATP-binding protein n=1 Tax=A... [more]
A0A6B1EGH5_9ACTN7.030e-9057.44ATP-binding cassette domain-containing protein n=2... [more]
A0A6V8KZG4_9ACTN2.660e-8855.29Sugar ABC transporter n=2 Tax=Phytohabitans rumici... [more]
A0A543FW91_9PSEU5.030e-8857.44Nucleoside ABC transporter ATP-binding protein n=3... [more]
UPI001E59E1996.910e-8858.68ATP-binding cassette domain-containing protein n=1... [more]
A0A1Q9SAE6_9PSEU1.680e-8754.34Uncharacterized protein n=1 Tax=Pseudonocardia sp.... [more]
UPI000E3412FE3.130e-8556.75ATP-binding cassette domain-containing protein n=1... [more]
A0A4R7J8E8_9ACTN3.400e-8052.07Simple sugar transport system ATP-binding protein ... [more]
A0A7W0R0X9_9ACTN3.240e-7352.22ATP-binding cassette domain-containing protein n=1... [more]
A0A349B0E1_9ACTN3.770e-6555.86ABC transporter domain-containing protein (Fragmen... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85559contigM-pyrifera_M_contig85559:2..862 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeArchaea
Seed ortholog score201.8
Seed ortholog evalue4.2e-49
Seed eggNOG ortholog1324957.K933_09112
Preferred namerbsA
KEGG koko:K02056
KEGG TC3.A.1.2
KEGG ModuleM00221
Hectar predicted targeting categoryother localisation
EggNOG free text desc.transport systems, ATPase components
EggNOG OGs23S1J@183963,2XUEG@28890,COG3845@1,arCOG00186@2157
EC3.6.3.17
COG Functional cat.E
Best tax levelHalobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00002,ko01000,ko02000
Exons1
Model size861
Cds size861
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816765.1287913-CDS-M-pyrifera_M_contig85559:1..8621622816765.1287913-CDS-M-pyrifera_M_contig85559:1..862Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85559 2..862 +
1692278165.0460296-CDS-M-pyrifera_M_contig85559:1..8621692278165.0460296-CDS-M-pyrifera_M_contig85559:1..862Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85559 2..862 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85559.19946.1prot_M-pyrifera_M_contig85559.19946.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85559 2..862 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85559.19946.1

>prot_M-pyrifera_M_contig85559.19946.1 ID=prot_M-pyrifera_M_contig85559.19946.1|Name=mRNA_M-pyrifera_M_contig85559.19946.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=287bp
VGEQQRLEILRALDADADVLLLDEPTAVLTGTEATALLAVCRRLADEGRA
VVIITHRLSEVIDGCDRVTVLRDGGVVLADAAVADHTASTLADAMVGRAI
SETARREPGTIADPATDARLAVDQVSFGVLHDVSFSVAGGEVLGVAGVDG
NGQAELEAVLAAVEIPRTGTVTLDGAQILPGRPRERIRRGIAYIPSDRYA
TALVRPMDLADNVELGRGGWWRARRRARQRAVGALLRHWDVRSAGAAARV
RSLSGGNAQKLVLARELEQSPALVITCHPTRGLGPGA
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mRNA from alignment at M-pyrifera_M_contig85559:2..862+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85559.19946.1 ID=mRNA_M-pyrifera_M_contig85559.19946.1|Name=mRNA_M-pyrifera_M_contig85559.19946.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=861bp|location=Sequence derived from alignment at M-pyrifera_M_contig85559:2..862+ (Macrocystis pyrifera P11B4 male)
GTCGGCGAACAGCAACGCCTCGAGATCCTGCGGGCGCTCGACGCCGACGC CGATGTGTTGCTGCTCGACGAGCCGACCGCCGTGCTCACCGGTACCGAGG CGACGGCGCTCCTCGCCGTCTGTCGCCGACTCGCCGACGAGGGGCGAGCG GTGGTCATCATCACCCATCGCCTGTCCGAGGTGATCGACGGCTGTGATCG AGTCACGGTCCTGCGCGACGGCGGCGTGGTGCTCGCCGACGCGGCCGTGG CCGACCACACCGCATCGACCCTCGCCGACGCCATGGTCGGCCGAGCCATC TCCGAAACCGCCCGCCGTGAACCGGGCACGATCGCCGATCCGGCCACCGA CGCCCGCCTCGCCGTCGATCAGGTGTCGTTCGGCGTGTTGCACGACGTCT CGTTCAGCGTGGCCGGGGGCGAGGTGCTCGGCGTCGCCGGGGTCGACGGC AACGGACAGGCTGAACTCGAAGCCGTTCTCGCCGCCGTGGAGATCCCCCG GACAGGCACCGTCACCCTCGACGGCGCGCAGATCCTGCCCGGGCGCCCCC GCGAGCGCATCCGCCGCGGCATCGCCTACATCCCGTCCGACCGCTACGCC ACTGCGCTCGTGCGCCCCATGGACCTCGCCGACAACGTCGAGCTCGGTCG CGGTGGCTGGTGGCGAGCGCGCCGACGCGCGCGTCAGCGCGCCGTGGGCG CCCTGCTCCGACATTGGGACGTGCGTTCGGCCGGCGCCGCAGCCCGGGTC CGCAGCCTCTCGGGCGGCAACGCCCAGAAGCTGGTGCTCGCCCGCGAACT CGAACAGTCACCCGCCCTCGTCATCACCTGCCACCCCACCCGCGGCCTCG GCCCCGGGGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85559:2..862+

>mRNA_M-pyrifera_M_contig85559.19946.1 ID=mRNA_M-pyrifera_M_contig85559.19946.1|Name=mRNA_M-pyrifera_M_contig85559.19946.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1722bp|location=Sequence derived from alignment at M-pyrifera_M_contig85559:2..862+ (Macrocystis pyrifera P11B4 male)
GTCGGCGAACAGCAACGCCTCGAGATCCTGCGGGCGCTCGACGCCGACGC
CGATGTGTTGCTGCTCGACGAGCCGACCGCCGTGCTCACCGGTACCGAGG
CGACGGCGCTCCTCGCCGTCTGTCGCCGACTCGCCGACGAGGGGCGAGCG
GTGGTCATCATCACCCATCGCCTGTCCGAGGTGATCGACGGCTGTGATCG
AGTCACGGTCCTGCGCGACGGCGGCGTGGTGCTCGCCGACGCGGCCGTGG
CCGACCACACCGCATCGACCCTCGCCGACGCCATGGTCGGCCGAGCCATC
TCCGAAACCGCCCGCCGTGAACCGGGCACGATCGCCGATCCGGCCACCGA
CGCCCGCCTCGCCGTCGATCAGGTGTCGTTCGGCGTGTTGCACGACGTCT
CGTTCAGCGTGGCCGGGGGCGAGGTGCTCGGCGTCGCCGGGGTCGACGGC
AACGGACAGGCTGAACTCGAAGCCGTTCTCGCCGCCGTGGAGATCCCCCG
GACAGGCACCGTCACCCTCGACGGCGCGCAGATCCTGCCCGGGCGCCCCC
GCGAGCGCATCCGCCGCGGCATCGCCTACATCCCGTCCGACCGCTACGCC
ACTGCGCTCGTGCGCCCCATGGACCTCGCCGACAACGTCGAGCTCGGTCG
CGGTGGCTGGTGGCGAGCGCGCCGACGCGCGCGTCAGCGCGCCGTGGGCG
CCCTGCTCCGACATTGGGACGTGCGTTCGGCCGGCGCCGCAGCCCGGGTC
CGCAGCCTCTCGGGCGGCAACGCCCAGAAGCTGGTGCTCGCCCGCGAACT
CGAACAGTCACCCGCCCTCGTCATCACCTGCCACCCCACCCGCGGCCTCG
GCCCCGGGGCCGTCGGCGAACAGCAACGCCTCGAGATCCTGCGGGCGCTC
GACGCCGACGCCGATGTGTTGCTGCTCGACGAGCCGACCGCCGTGCTCAC
CGGTACCGAGGCGACGGCGCTCCTCGCCGTCTGTCGCCGACTCGCCGACG
AGGGGCGAGCGGTGGTCATCATCACCCATCGCCTGTCCGAGGTGATCGAC
GGCTGTGATCGAGTCACGGTCCTGCGCGACGGCGGCGTGGTGCTCGCCGA
CGCGGCCGTGGCCGACCACACCGCATCGACCCTCGCCGACGCCATGGTCG
GCCGAGCCATCTCCGAAACCGCCCGCCGTGAACCGGGCACGATCGCCGAT
CCGGCCACCGACGCCCGCCTCGCCGTCGATCAGGTGTCGTTCGGCGTGTT
GCACGACGTCTCGTTCAGCGTGGCCGGGGGCGAGGTGCTCGGCGTCGCCG
GGGTCGACGGCAACGGACAGGCTGAACTCGAAGCCGTTCTCGCCGCCGTG
GAGATCCCCCGGACAGGCACCGTCACCCTCGACGGCGCGCAGATCCTGCC
CGGGCGCCCCCGCGAGCGCATCCGCCGCGGCATCGCCTACATCCCGTCCG
ACCGCTACGCCACTGCGCTCGTGCGCCCCATGGACCTCGCCGACAACGTC
GAGCTCGGTCGCGGTGGCTGGTGGCGAGCGCGCCGACGCGCGCGTCAGCG
CGCCGTGGGCGCCCTGCTCCGACATTGGGACGTGCGTTCGGCCGGCGCCG
CAGCCCGGGTCCGCAGCCTCTCGGGCGGCAACGCCCAGAAGCTGGTGCTC
GCCCGCGAACTCGAACAGTCACCCGCCCTCGTCATCACCTGCCACCCCAC
CCGCGGCCTCGGCCCCGGGGCC
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