prot_M-pyrifera_M_contig85557.19945.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85557.19945.1
Unique Nameprot_M-pyrifera_M_contig85557.19945.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length72
Homology
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: L8H192_ACACA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H192_ACACA)

HSP 1 Score: 71.6 bits (174), Expect = 2.310e-14
Identity = 33/71 (46.48%), Postives = 48/71 (67.61%), Query Frame = 0
Query:    1 MRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 71
            +  +  V+D  ++K ++A+   DLDTLMKYIYRG+ D   +  SLLKWH+    KGG+ CIVRA+ +RK +
Sbjct:   58 VNVLTSVKDADMQKNIDALSPTDLDTLMKYIYRGLEDGENST-SLLKWHEAVTKKGGLGCIVRALAERKAL 127          
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: D3BAU2_POLPP (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BAU2_POLPP)

HSP 1 Score: 68.2 bits (165), Expect = 7.890e-13
Identity = 30/75 (40.00%), Postives = 48/75 (64.00%), Query Frame = 0
Query:    1 MRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMA----DERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 71
            +  +  +++  I+ C+E+++A+ LD LMKYIYRG+A     +        KW++ TL K GM C+VRAI++RK V
Sbjct:   71 INVLSNIKEKEIDGCLESLDADQLDILMKYIYRGLAAAATSDNTNAALFFKWYEATLKKAGMGCVVRAISERKTV 145          
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: UPI000644EC78 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644EC78)

HSP 1 Score: 66.6 bits (161), Expect = 2.880e-12
Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 0
Query:    4 MGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 71
            +  +++  ++ CV  ++ + LD LMKYIYRG+A          KW++ TL K GM C+VRAI++RK V
Sbjct:   74 LSAIKEKDVDGCVNQLDDDQLDILMKYIYRGLATGDNNSAIFFKWYEATLKKSGMGCVVRAISERKTV 141          
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: F4QBJ7_CAVFA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QBJ7_CAVFA)

HSP 1 Score: 65.5 bits (158), Expect = 7.960e-12
Identity = 31/68 (45.59%), Postives = 46/68 (67.65%), Query Frame = 0
Query:    4 MGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 71
            +G V++  ++ CVE ++A+ LD LMKYIYRG+A    +     KW + TL KGG+  +VRAI++RK V
Sbjct:   74 LGQVKEKDVDACVERLDADQLDILMKYIYRGLATGDNSA-IFFKWFEATLKKGGIGSVVRAISERKTV 140          
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: A0A0B6YW81_9EUPU (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Arion vulgaris TaxID=1028688 RepID=A0A0B6YW81_9EUPU)

HSP 1 Score: 65.5 bits (158), Expect = 9.430e-12
Identity = 28/61 (45.90%), Postives = 43/61 (70.49%), Query Frame = 0
Query:   12 IEKCVEAIEAEDLDTLMKYIYRGM-ADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 71
            ++KC+++++++++DTLMKYIYRG       +   LL WHQ T A GG+  I+R +TDRK V
Sbjct:   88 VDKCIQSLDSKNVDTLMKYIYRGFDTPSENSSAILLTWHQKTFAVGGLGSIMRVLTDRKTV 148          
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: A0A4Y7M463_9CRUS (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Daphnia barbata TaxID=414587 RepID=A0A4Y7M463_9CRUS)

HSP 1 Score: 65.1 bits (157), Expect = 1.300e-11
Identity = 31/72 (43.06%), Postives = 44/72 (61.11%), Query Frame = 0
Query:    1 MRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGM-ADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 71
            M+ +  V+   IE+ V A++++ LD LMKYIYRG       + G LL WH+   A  G+ CIVR +TD+K V
Sbjct:   76 MQVLLSVKSSQIEEAVNALDSDQLDVLMKYIYRGFETPSEGSSGQLLAWHEKVHAVAGVGCIVRVLTDKKRV 147          
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: A0A0R3SSX2_HYMDI (Actin-related protein 2/3 complex subunit 5 n=2 Tax=Hymenolepididae TaxID=6214 RepID=A0A0R3SSX2_HYMDI)

HSP 1 Score: 63.9 bits (154), Expect = 3.670e-11
Identity = 34/72 (47.22%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    1 MRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADE-RFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 71
            +RAM  +R   I+  V  +  E LDTLMKYIYRG  +       +LL WH+  LAKG MS I R +TDR+ V
Sbjct:   76 LRAMSQMRSTQIDSFVGGLNQEQLDTLMKYIYRGFQNPVDITPAALLTWHEKVLAKGKMSSICRVLTDRQVV 147          
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: A0A507DKP2_9FUNG (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DKP2_9FUNG)

HSP 1 Score: 63.9 bits (154), Expect = 4.140e-11
Identity = 30/70 (42.86%), Postives = 41/70 (58.57%), Query Frame = 0
Query:    1 MRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMAD-ERFAGGSLLKWHQHTLAKGGMSCIVRAITDRK 69
            M ++   +   I   V  +  + LDTLMKYIYRGMA+ E +    LL WH+     GG+ CI+R +TDRK
Sbjct:   82 MDSLLAAKSSDIPNIVSRLNPQQLDTLMKYIYRGMANPELYNAAVLLSWHEKAYEAGGLGCIIRVMTDRK 151          
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: UPI00193A8D1E (actin-related protein 2/3 complex subunit 5-A-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A8D1E)

HSP 1 Score: 63.5 bits (153), Expect = 5.500e-11
Identity = 29/71 (40.85%), Postives = 45/71 (63.38%), Query Frame = 0
Query:    1 MRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYR--GMADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRK 69
            MR +  ++   I+  V++ +A+ LD L KYIY+   +  +  +  SLL WH+  +AKGG+ CIVR +TDRK
Sbjct:   78 MRVLSSMKASEIQSAVDSCDADTLDVLAKYIYKCFALGPDGQSCASLLTWHEKVVAKGGVGCIVRVLTDRK 148          
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: E9FWA9_DAPPU (Actin-related protein 2/3 complex subunit 5 n=11 Tax=Daphnia TaxID=6668 RepID=E9FWA9_DAPPU)

HSP 1 Score: 63.5 bits (153), Expect = 5.720e-11
Identity = 31/72 (43.06%), Postives = 43/72 (59.72%), Query Frame = 0
Query:    1 MRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGM-ADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 71
            M+ +  V+   IE+ V A++ + LD LMKYIYRG       + G LL WH+   A  G+ CIVR +TD+K V
Sbjct:   81 MQVLLSVKSTQIEEAVNALDRDQLDILMKYIYRGFETPSEGSSGQLLAWHEKVHAVAGVGCIVRVLTDKKRV 152          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8H192_ACACA2.310e-1446.48Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
D3BAU2_POLPP7.890e-1340.00Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
UPI000644EC782.880e-1241.18hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F4QBJ7_CAVFA7.960e-1245.59Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A0B6YW81_9EUPU9.430e-1245.90Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A4Y7M463_9CRUS1.300e-1143.06Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
A0A0R3SSX2_HYMDI3.670e-1147.22Actin-related protein 2/3 complex subunit 5 n=2 Ta... [more]
A0A507DKP2_9FUNG4.140e-1142.86Actin-related protein 2/3 complex subunit 5 n=1 Ta... [more]
UPI00193A8D1E5.500e-1140.85actin-related protein 2/3 complex subunit 5-A-like... [more]
E9FWA9_DAPPU5.720e-1143.06Actin-related protein 2/3 complex subunit 5 n=11 T... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036743Actin-related protein 2/3 complex subunit 5 superfamilyGENE3D1.25.40.190coord: 1..71
e-value: 3.3E-20
score: 74.4
IPR036743Actin-related protein 2/3 complex subunit 5 superfamilySUPERFAMILY69103Arp2/3 complex 16 kDa subunit ARPC5coord: 2..71
IPR006789Actin-related protein 2/3 complex subunit 5PFAMPF04699P16-Arccoord: 3..71
e-value: 1.9E-19
score: 70.6
IPR006789Actin-related protein 2/3 complex subunit 5PANTHERPTHR12644ARP2/3 COMPLEX 16 KD SUBUNIT P16-ARCcoord: 2..70

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85557contigM-pyrifera_M_contig85557:164..466 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85557.19945.1mRNA_M-pyrifera_M_contig85557.19945.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85557 146..466 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85557.19945.1 ID=prot_M-pyrifera_M_contig85557.19945.1|Name=mRNA_M-pyrifera_M_contig85557.19945.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=72bp
MRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGSLLKWHQ
HTLAKGGMSCIVRAITDRKGV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036743ARPC5_sf
IPR006789ARPC5