mRNA_M-pyrifera_M_contig85557.19945.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: L8H192_ACACA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H192_ACACA) HSP 1 Score: 75.1 bits (183), Expect = 1.280e-15 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 1 Query: 1 QNFEIVMRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 231 Q V+ + V+D ++K ++A+ DLDTLMKYIYRG+ D + SLLKWH+ KGG+ CIVRA+ +RK + Sbjct: 52 QQIRAVVNVLTSVKDADMQKNIDALSPTDLDTLMKYIYRGLEDGENST-SLLKWHEAVTKKGGLGCIVRALAERKAL 127
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: D3BAU2_POLPP (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3BAU2_POLPP) HSP 1 Score: 74.7 bits (182), Expect = 2.780e-15 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 1 QNFEIVMRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMA----DERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 231 QN IV+ + +++ I+ C+E+++A+ LD LMKYIYRG+A + KW++ TL K GM C+VRAI++RK V Sbjct: 65 QNAAIVINVLSNIKEKEIDGCLESLDADQLDILMKYIYRGLAAAATSDNTNAALFFKWYEATLKKAGMGCVVRAISERKTV 145
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: F4QBJ7_CAVFA (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4QBJ7_CAVFA) HSP 1 Score: 70.9 bits (172), Expect = 7.920e-14 Identity = 34/77 (44.16%), Postives = 51/77 (66.23%), Query Frame = 1 Query: 1 QNFEIVMRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 231 QN +V+ +G V++ ++ CVE ++A+ LD LMKYIYRG+A + KW + TL KGG+ +VRAI++RK V Sbjct: 65 QNSAVVVGLLGQVKEKDVDACVERLDADQLDILMKYIYRGLATGDNSA-IFFKWFEATLKKGGIGSVVRAISERKTV 140
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: UPI000644EC78 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644EC78) HSP 1 Score: 70.9 bits (172), Expect = 8.100e-14 Identity = 31/77 (40.26%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 1 QNFEIVMRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 231 QN V+ + +++ ++ CV ++ + LD LMKYIYRG+A KW++ TL K GM C+VRAI++RK V Sbjct: 65 QNATAVIGVLSAIKEKDVDGCVNQLDDDQLDILMKYIYRGLATGDNNSAIFFKWYEATLKKSGMGCVVRAISERKTV 141
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: A0A152A6H4_9MYCE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A152A6H4_9MYCE) HSP 1 Score: 68.9 bits (167), Expect = 4.470e-13 Identity = 29/76 (38.16%), Postives = 49/76 (64.47%), Query Frame = 1 Query: 4 NFEIVMRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 231 N +IV++ + G ++ I+ V++++++ LD LMKYIYR + L KWH+ TL KGG+ I+R I+++K V Sbjct: 65 NADIVIKLLIGFKEKDIDAAVDSLDSDQLDVLMKYIYRALGTTTETSSLLFKWHESTLKKGGLGAIMRVISEKKTV 140
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: A0A8J4UWY0_9MYCE (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4UWY0_9MYCE) HSP 1 Score: 68.2 bits (165), Expect = 8.350e-13 Identity = 35/80 (43.75%), Postives = 49/80 (61.25%), Query Frame = 1 Query: 1 QNFEIVMRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGS---LLKWHQHTLAKGGMSCIVRAITDRKGV 231 QN +V+ +GG ++ IE V + + LD LMKYIYRG+A AG + LKWH+ L KGGM I+R I+++K V Sbjct: 62 QNATVVLSLLGGFKEKDIEASVNGLNDDQLDVLMKYIYRGLA----AGENSAVFLKWHEVVLKKGGMGTIIRTISEKKTV 137
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: A0A4Y7M463_9CRUS (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Daphnia barbata TaxID=414587 RepID=A0A4Y7M463_9CRUS) HSP 1 Score: 68.2 bits (165), Expect = 1.040e-12 Identity = 32/76 (42.11%), Postives = 46/76 (60.53%), Query Frame = 1 Query: 7 FEIVMRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGM-ADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 231 +VM+ + V+ IE+ V A++++ LD LMKYIYRG + G LL WH+ A G+ CIVR +TD+K V Sbjct: 72 MNVVMQVLLSVKSSQIEEAVNALDSDQLDVLMKYIYRGFETPSEGSSGQLLAWHEKVHAVAGVGCIVRVLTDKKRV 147
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: A0A507DKP2_9FUNG (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507DKP2_9FUNG) HSP 1 Score: 68.2 bits (165), Expect = 1.180e-12 Identity = 32/76 (42.11%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 1 QNFEIVMRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMAD-ERFAGGSLLKWHQHTLAKGGMSCIVRAITDRK 225 +N + VM ++ + I V + + LDTLMKYIYRGMA+ E + LL WH+ GG+ CI+R +TDRK Sbjct: 76 RNTQTVMDSLLAAKSSDIPNIVSRLNPQQLDTLMKYIYRGMANPELYNAAVLLSWHEKAYEAGGLGCIIRVMTDRK 151
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: F1A489_DICPU (Actin-related protein 2/3 complex subunit 5 n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F1A489_DICPU) HSP 1 Score: 67.4 bits (163), Expect = 1.710e-12 Identity = 32/77 (41.56%), Postives = 47/77 (61.04%), Query Frame = 1 Query: 1 QNFEIVMRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 231 QN IV+ +G ++ +E VE++ E LD LMKY+YRG+A + KWH+ L KGGM I+R I+++K V Sbjct: 63 QNATIVLNLLGSFKEKDVETSVESLNDEQLDVLMKYVYRGLAVGENSA-IFFKWHECVLKKGGMGTIIRVISEKKTV 138
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Match: E9FWA9_DAPPU (Actin-related protein 2/3 complex subunit 5 n=11 Tax=Daphnia TaxID=6668 RepID=E9FWA9_DAPPU) HSP 1 Score: 67.0 bits (162), Expect = 3.260e-12 Identity = 33/76 (43.42%), Postives = 45/76 (59.21%), Query Frame = 1 Query: 7 FEIVMRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGM-ADERFAGGSLLKWHQHTLAKGGMSCIVRAITDRKGV 231 IVM+ + V+ IE+ V A++ + LD LMKYIYRG + G LL WH+ A G+ CIVR +TD+K V Sbjct: 77 LNIVMQVLLSVKSTQIEEAVNALDRDQLDILMKYIYRGFETPSEGSSGQLLAWHEKVHAVAGVGCIVRVLTDKKRV 152 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85557.19945.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85557.19945.1 >prot_M-pyrifera_M_contig85557.19945.1 ID=prot_M-pyrifera_M_contig85557.19945.1|Name=mRNA_M-pyrifera_M_contig85557.19945.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=72bp MRAMGGVRDDGIEKCVEAIEAEDLDTLMKYIYRGMADERFAGGSLLKWHQback to top mRNA from alignment at M-pyrifera_M_contig85557:146..466+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85557.19945.1 ID=mRNA_M-pyrifera_M_contig85557.19945.1|Name=mRNA_M-pyrifera_M_contig85557.19945.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=321bp|location=Sequence derived from alignment at M-pyrifera_M_contig85557:146..466+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85557:146..466+ >mRNA_M-pyrifera_M_contig85557.19945.1 ID=mRNA_M-pyrifera_M_contig85557.19945.1|Name=mRNA_M-pyrifera_M_contig85557.19945.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=432bp|location=Sequence derived from alignment at M-pyrifera_M_contig85557:146..466+ (Macrocystis pyrifera P11B4 male)back to top |