prot_M-pyrifera_M_contig85555.19944.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85555.19944.1
Unique Nameprot_M-pyrifera_M_contig85555.19944.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length194
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85555.19944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSMARTSM00365LRR_sd22_2coord: 83..104
e-value: 2.3E-4
score: 30.5
coord: 61..82
e-value: 0.0098
score: 25.1
coord: 105..126
e-value: 18.0
score: 13.5
coord: 39..60
e-value: 1.9
score: 17.5
coord: 17..38
e-value: 120.0
score: 6.8
NoneNo IPR availablePFAMPF14580LRR_9coord: 43..176
e-value: 9.6E-20
score: 70.8
NoneNo IPR availablePANTHERPTHR45973:SF12DYNEIN REGULATORY COMPLEX SUBUNIT 3coord: 10..192
NoneNo IPR availablePANTHERPTHR45973FAMILY NOT NAMEDcoord: 10..192
NoneNo IPR availableSUPERFAMILY52075Outer arm dynein light chain 1coord: 16..176
IPR003591Leucine-rich repeat, typical subtypeSMARTSM00369LRR_typ_2coord: 39..60
e-value: 29.0
score: 9.5
coord: 61..83
e-value: 6.9
score: 14.6
coord: 105..128
e-value: 23.0
score: 10.3
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 80..176
e-value: 8.4E-25
score: 88.8
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 8..79
e-value: 1.5E-13
score: 52.1
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 19..40
score: 6.541
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 41..62
score: 8.544
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 63..84
score: 9.66
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 85..106
score: 8.582
IPR001611Leucine-rich repeatPROSITEPS51450LRRcoord: 107..128
score: 8.29

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85555contigM-pyrifera_M_contig85555:62..643 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85555.19944.1mRNA_M-pyrifera_M_contig85555.19944.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85555 62..643 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85555.19944.1 ID=prot_M-pyrifera_M_contig85555.19944.1|Name=mRNA_M-pyrifera_M_contig85555.19944.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=194bp
VCLFVVDRVKVWEDLKLETLEQLSLSFRRLRVISHLEGLKQLRVLRLDNN
AIETIEGLDALENLEWLDLSFNRIERVSGLEKLSKLKDLSLAHNRIHSVE
GVSELRALSVLCLGHNRISSLSALSPLRRLPLLRALSLLGNPCASSGDHR
SETLARLPHLQFLDFETVDKAETEQALLRHAQLSEALRNEDERL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003591Leu-rich_rpt_typical-subtyp
IPR032675LRR_dom_sf
IPR001611Leu-rich_rpt