prot_M-pyrifera_M_contig85448.19922.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85448.19922.1
Unique Nameprot_M-pyrifera_M_contig85448.19922.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length263
Homology
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BLAST of mRNA_M-pyrifera_M_contig85448.19922.1 vs. uniprot
Match: A0A521KR86_9BACT (VCBS repeat-containing protein (Fragment) n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A521KR86_9BACT)

HSP 1 Score: 55.5 bits (132), Expect = 4.290e-6
Identity = 29/49 (59.18%), Postives = 35/49 (71.43%), Query Frame = 0 
Query:    6 LARRELALGGRPLGLVAHDFDADGFDDLAVVLESPGEVAVFAGTDQGLA 54
            LARRELAL G+P  L A D D DG D+LAV L+SPG + V+ GT  G+A
Sbjct:   88 LARRELALPGKPACLWAGDLDGDGRDELAVALQSPGRLLVWRGTATGIA 136
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85448.19922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A521KR86_9BACT4.290e-659.18VCBS repeat-containing protein (Fragment) n=1 Tax=... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 10..248
e-value: 1.3E-9
score: 39.8
NoneNo IPR availablePFAMPF13517VCBScoord: 201..263
e-value: 1.1E-6
score: 29.1
NoneNo IPR availableSUPERFAMILY63829Calcium-dependent phosphotriesterasecoord: 65..226
NoneNo IPR availableSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 16..69

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85448contigM-pyrifera_M_contig85448:74..862 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85448.19922.1mRNA_M-pyrifera_M_contig85448.19922.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85448 74..862 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85448.19922.1 ID=prot_M-pyrifera_M_contig85448.19922.1|Name=mRNA_M-pyrifera_M_contig85448.19922.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=263bp
PAPDLLARRELALGGRPLGLVAHDFDADGFDDLAVVLESPGEVAVFAGTD
QGLAPFGAKVAVGGFPTEPVLQAGRVLVGSMTTGELLRVRVGRDADGALV
PGVEARSAPGGVPRLLAASPTRTLWVTRDDALVVLDAQGGRVERQLEAGA
RIVGAYVDDDTGRVIVLGQGAGEVRALDAATLADQARLAFPGVPRSVDAG
DLDGDGDDELVVCGGDDAVWVFGLGAPGGVSMAAAPARLTQPNLVPKGIH
ARDLSGDGRAELV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015943WD40/YVTN_repeat-like_dom_sf