mRNA_M-pyrifera_M_contig854.19907.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig854.19907.1
Unique NamemRNA_M-pyrifera_M_contig854.19907.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Match: D8LLN6_ECTSI (Oxidoreductase, short chain dehydrogenase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LLN6_ECTSI)

HSP 1 Score: 454 bits (1169), Expect = 5.560e-156
Identity = 221/274 (80.66%), Postives = 250/274 (91.24%), Query Frame = 1
Query:    1 RTMASSDAAGAP-ATPLPGNCLVIGGNRGLGLEIVRHLKERQSNVMATTRKTNEDLEAIGVKVIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILTPDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGGSVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMKTSMTEIYADKYDELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESLGLGVYALDNPSEYGPFCELPW 819
            R MASS     P  +PLPGNCLVIGGNRGLGLE+VRHLK+R+S V+ATTR TN DLEA+GV V+EGIDVSD DSGT LVEAV+++LG+G TLDYVICNAGIL PDT +DP++DAAVKMYEVCVLGPLR LQ+L +SGLLR+GS IGM+TSEGGSVGLRTE+EGG+NYGHHMSKCAQNMMGK+FALDVK RG+AIV +HPGFMKTSMTEIYADKYDELGAIGPE+AAPGIVKAVEDLTLETTG+F+APQGS+SLGLGVYAL++P  YGPFCELPW
Sbjct:   67 RAMASSSTNETPPVSPLPGNCLVIGGNRGLGLEVVRHLKKRESTVLATTRTTNADLEAVGVSVLEGIDVSDKDSGTKLVEAVQKELGEGGTLDYVICNAGILIPDTFEDPEFDAAVKMYEVCVLGPLRVLQALVVSGLLRKGSNIGMITSEGGSVGLRTEVEGGNNYGHHMSKCAQNMMGKLFALDVKTRGVAIVNIHPGFMKTSMTEIYADKYDELGAIGPEEAAPGIVKAVEDLTLETTGKFIAPQGSKSLGLGVYALEDPESYGPFCELPW 340          
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Match: A0A1X6NYS2_PORUM (Uncharacterized protein n=1 Tax=Porphyra umbilicalis TaxID=2786 RepID=A0A1X6NYS2_PORUM)

HSP 1 Score: 241 bits (615), Expect = 1.850e-73
Identity = 128/260 (49.23%), Postives = 173/260 (66.54%), Query Frame = 1
Query:   43 PLPGNCLVIGGNRGLGLEIVRHLKERQSNVMATTRKTNED-LEAIGVKVIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILTPDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGGSVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMKTSMTEIYADKYDELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESLGLGVYALDNPSEYGPFCELPW 819
            PL  + L+IG   GLGLE+ + L    + +  T R T +  LE +   +I GIDV+ +D    LVE +   LG    +  ++C AGIL PD+L D + D   +M +VC LGPLR + +L  +GLL  GSK+G+VTSEGGS+GLRT  EGG NYGHH SK A+NM GKI +LD+  RG+ +VC+HPGFMK+SMTE + +KYDELGA+ P  AA G+V+ ++ L  + TGRF+ P GSE+LG GV+ L+   + GP  ELPW
Sbjct:    9 PLGDHALIIGAGSGLGLELAKVLAPTGTALAVTVRNTVDPALEELDASIIRGIDVA-TDGPDKLVEELAA-LG-WVNVSTLVCVAGILKPDSLGDLQPDNWRQMMDVCALGPLRIVDALVTAGLLTAGSKVGLVTSEGGSIGLRTPKEGGGNYGHHCSKAAENMAGKILSLDLAERGMPLVCIHPGFMKSSMTEPFKEKYDELGAVEPHVAAKGVVECMKQLNKDNTGRFIQPLGSENLGFGVWGLEEAEKKGPMSELPW 265          
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Match: A0A7S1ESF3_9RHOD (Hypothetical protein n=1 Tax=Timspurckia oligopyrenoides TaxID=708627 RepID=A0A7S1ESF3_9RHOD)

HSP 1 Score: 213 bits (542), Expect = 1.170e-61
Identity = 116/260 (44.62%), Postives = 166/260 (63.85%), Query Frame = 1
Query:   52 GNCLVIGGNRGLGLEIVRHLKERQSNVMATTRKT--NEDLEAIGVK-VIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILTPDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGGSVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMKTSMT-EIYADKYDELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESLGLGVYALDNPSEYGPFCELPW 819
            G  LVIGG+RGLGLE+V+ L      V+A  RK   + +LEA+    VI G D    +    +   + E +      D V+  +G  T +TLD+   +  VKM+++C + P + L S+  +      +KIG +TSEGGS+GLRTE EGG NYGHHMSK + NM+GK+ A D+KP GI++V +HPGF++T MT + Y+  +DELGA+    A P I++ V DL+LE+TGRFVA  G+  LGLG+YA+++PS+  P  +LPW
Sbjct:   83 GTTLVIGGDRGLGLEMVKALTNNGCKVIAAIRKDKPSAELEAVNPHTVITGADFMSDNVDEIICNGLTEPV------DTVMMVSGYFTTETLDEFNREEEVKMFKICAISPGQILTSMHKNKKFAPNAKIGFITSEGGSIGLRTEKEGGLNYGHHMSKASSNMLGKLLAYDLKPFGISMVMIHPGFLRTDMTADKYSHLWDELGAVTAATAVPYILQCVADLSLESTGRFVAAMGAHGLGLGIYAIEDPSKLVPGADLPW 336          
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Match: A0A0F7SXX7_PHARH (Short chain dehydrogenase reductase family superfamily n=1 Tax=Phaffia rhodozyma TaxID=264483 RepID=A0A0F7SXX7_PHARH)

HSP 1 Score: 187 bits (474), Expect = 3.130e-52
Identity = 107/260 (41.15%), Postives = 154/260 (59.23%), Query Frame = 1
Query:   49 PGNCLVIGGNRGLGLEIVRHLKERQSNVMATTRK-TNEDLEAIGVKVIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILTPDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGGSVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMKTSMTEIYADKYDELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESLGLG--VYALDNPSEYGPFCELPW 819
            P   L++G NRGLGL + + L +R + V ATTR    E     GV VIEGIDV +  +G TLVE +      G  LD  +  AG+L  +T  +P + A + MY++C +GP+    +L+ S      +K+ ++TSEGGS+ LRTE EGG  +GHH SK A NM+G + + D+KP+G+ +V +HPGF+ T MT    D Y + GA+ PE AAP  +  V+ +TL+ TG+F AP G + +G    V   D P+      +LPW
Sbjct:   38 PLKALIVGANRGLGLALTKELHKRGTTVYATTRSPAKEGTFPDGVHVIEGIDVGEPGAGKTLVEKLE-----GAKLDLTVIVAGLLKEETFKEPDFQAEMDMYKICAVGPVFITSALSKSSFA-SNAKLILLTSEGGSITLRTEKEGGGMFGHHGSKAAANMVGHLLSYDLKPKGVTVVMIHPGFLITDMTGGMKDHYKKGGAVKPEVAAPIFLDFVDTVTLKHTGQFWAPMGPKGIGNAEEVLGKDLPTPL----QLPW 287          
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Match: V2XTU7_MONRO (Short chain dehydrogenase reductase family superfamily n=3 Tax=Moniliophthora TaxID=221102 RepID=V2XTU7_MONRO)

HSP 1 Score: 185 bits (470), Expect = 4.250e-52
Identity = 99/235 (42.13%), Postives = 144/235 (61.28%), Query Frame = 1
Query:   61 LVIGGNRGLGLEIVRHLKERQSNVMATTRKTNEDLEAIGVKVIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILTPDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGGSVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMKTSMTEI--YADKYDELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESLG 759
            LVIG +RGLG E+ ++L  +   V AT R T   L + GV+ I  +D+++ D G+ +V+ +      G+ LD VI NAG+   +  D P +   V+MY+V  + P+  +  L  + LL   SK+ ++TSEGGS+GLRT+ EGG NYGHH SK A NM+GK+ A D+K +GI +  +HPGFMKT MT+   +   Y+  GA+ P +AA   +  V DLT + TG F AP+G   +G
Sbjct:    5 LVIGASRGLGQELAKYLASKGHTVFATVRSTPSGLSS-GVETIPNVDLTEEDVGSKIVKGLS-----GQKLDLVIVNAGVFKKEDFDSPSFADEVEMYKVVAIAPVNIIHHLVKANLLNSPSKVILITSEGGSIGLRTQEEGGGNYGHHGSKAAANMVGKLLAHDLKDKGITVAMIHPGFMKTDMTKNVGFDQFYESGGAVEPAEAAQSTIDFVLDLTPDQTGTFWAPRGPAGVG 233          
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Match: A0A1E3I5S4_9TREE (Cytoplasmic protein n=2 Tax=Cryptococcus depauperatus TaxID=5208 RepID=A0A1E3I5S4_9TREE)

HSP 1 Score: 184 bits (467), Expect = 1.540e-51
Identity = 106/265 (40.00%), Postives = 160/265 (60.38%), Query Frame = 1
Query:   55 NCLVIGGNRGLGLEIVRHLKER--QSNVMATTR-KTNEDLEAIGVKVIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILTPDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGGSVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMKTSMTEIYADK--YDELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESLG-----LGVYALDNPSEYGPFCELPW 819
            N LV+G +RGLGL +V+H   +   +NV AT R   + D+   GV +IE +D S  D G  +V+ ++     G  +D V+  AG+L P+ L++  +   V MY VC + P+  +Q+L M+  L   ++I +VTSE GS+ LRTE EGG  +GHH SK A+NM+G + + D+K RG++I  +HPGF+KT MT+    +  YD++GA+ P++AA    + V  L L+ TG+F AP G++ +G     LG   LD     GP  E+PW
Sbjct:    5 NVLVVGASRGLGLVLVKHYSSQLTPANVFATVRGSASADVFPEGVNIIEDVDCSREDCGKKIVDGLQ-----GAAVDIVVYVAGVLKPEKLEELSWKDEVLMYTVCSIAPVFVVQALLMASSLAPDARIALVTSEAGSITLRTESEGGGAFGHHGSKAAENMVGHLLSYDLKERGVSIAMIHPGFLKTDMTKDAGMEQFYDKMGAVTPDEAAKPFAEFVNKLNLDMTGKFWAPLGAKGIGNAEEVLGEEVLDKS---GPL-EIPW 260          
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Match: A0A0S6XBS5_BLOB1 (Uncharacterized protein n=1 Tax=Fungal sp. (strain No.11243) TaxID=1603295 RepID=A0A0S6XBS5_BLOB1)

HSP 1 Score: 183 bits (465), Expect = 3.030e-51
Identity = 94/256 (36.72%), Postives = 150/256 (58.59%), Query Frame = 1
Query:   61 LVIGGNRGLGLEIVRHLKERQSN-VMATTRKTNEDLEAIGVKVIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILTPDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGGSVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMKTSMTE-IYADKY-DELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESLGLGVYALDNPSEYGPFCELPW 819
            L++G  RGLG E+ +   ++ +  V  T RK+  +  +  +K I G+D+ +  S  TL++ + +Q     TLD VI  AG    ++ D+P +   V MY    + P+  +Q L  +G L++G+K+ ++TSE GS+GLR E EGG NYGHH SK A NM+GK+ +LD+K  G+A+  LHPGFM++ MT+ +  DK+ D+ GA+ P  AA  +++ +    L  TG + AP+G   +G     L +  +     +LPW
Sbjct:    5 LIVGATRGLGFELAKQYSQQSNTTVYGTARKSTPEDASTDIKWISGVDLMEESSSKTLIDGLHKQGSATTTLDVVIITAGYFGKESFDEPSWSKQVTMYTTSAIAPVFIVQGLFKAGALKKGAKVFLITSESGSIGLRHESEGGGNYGHHASKAASNMVGKLLSLDLKEHGVAVGLLHPGFMRSEMTKSVGFDKFWDDGGAVEPSVAAKSLIEFISTFDLSKTGEYWAPRGPGDIGTAEDTLGSKDKLPTPLQLPW 260          
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Match: A0A8H3IKQ9_9LECA (Uncharacterized protein n=1 Tax=Heterodermia speciosa TaxID=116794 RepID=A0A8H3IKQ9_9LECA)

HSP 1 Score: 183 bits (464), Expect = 3.560e-51
Identity = 98/260 (37.69%), Postives = 161/260 (61.92%), Query Frame = 1
Query:   55 NCLVIGGNRGLGLEIVR-HLKERQSNVMATTRKTNEDLEAIGVKVIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILTPDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGGSVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMKTSMTE-IYADKY-DELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESLGLG--VYALDNPSEYGPFCELPW 819
            N L++G +RGLG  + + + +++ +++ AT+R ++       +  +EGID++  D+G ++V+ ++     G+TLD VI  AG    +T D P +DA V+MY++  +GP+  +  L  +GL+ +  KI +V+SE GS+ LR E EGG NYGHH SK A NM GK+ +LD+K +GIA+  +HPGFM+T MT+ +  DKY D  GA+ P++AA  + + +  L + +TG + AP+G   +G    V   + P+      +LPW
Sbjct:    2 NILIVGASRGLGASLTKFYAQDKDNHIFATSRTSSTAESPEHITYVEGIDIASEDAGPSIVKRIKPS---GKTLDVVIITAGYFATETFDKPDFDAEVQMYKISSIGPVFIVHHLVKAGLMAKDGKIVLVSSESGSITLRHESEGGGNYGHHASKAALNMAGKLLSLDLKAKGIAVGIVHPGFMRTEMTKGVGFDKYWDAGGAVTPDEAAASLKQYISKLDMGSTGEYWAPRGPRDIGTAEPVLGKNLPTPL----QLPW 254          
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Match: UPI0004407C9C (NAD-binding protein n=1 Tax=Fomitiporia mediterranea (strain MF3/22) TaxID=694068 RepID=UPI0004407C9C)

HSP 1 Score: 183 bits (464), Expect = 3.780e-51
Identity = 105/263 (39.92%), Postives = 156/263 (59.32%), Query Frame = 1
Query:   49 PGNCLVIGGNRGLGLEIVRHLKERQSNVMATTRKTNEDLEAI--GVKVIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILTPDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGGSVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMKTSMTE-IYADK-YDELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESLGLG--VYALDNPSEYGPFCELPW 819
            P   LV+G +RGLGLE+VR+L  R SNV AT R   +  +     + VI+G+DV +  +G T+V+ +     DG  LD VI NAG+   +TL+ P +   + MY+   + P+     L  S     G+K+ ++T+EGGS+ LRT+ EGG NYGHH SK A NM+G++ + D+   G+A+V +HPGFM+T MT+ +  DK YD  GA+ P +AA  ++  V +L+++ TG F AP+G   +G    V   D P+       LPW
Sbjct:    3 PLTSLVVGASRGLGLELVRNLHARGSNVFATVRSPPQTPDHFPNDITVIDGVDVGEEKAGDTIVKVL-----DGRQLDLVIINAGVFKTETLEKPSFADELDMYKTVAIAPVFLTHHLRKSNSFAPGAKLVLITTEGGSIALRTKEEGGGNYGHHASKAAANMVGRLLSHDLVDDGVAVVMIHPGFMRTDMTKNVGFDKFYDSGGAVLPSEAAASVLDFVANLSIKDTGSFWAPRGPRDIGEAERVLGKDLPTPL----RLPW 256          
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Match: A0A6A6BKH6_9PEZI (Uncharacterized protein n=1 Tax=Aplosporella prunicola CBS 121167 TaxID=1176127 RepID=A0A6A6BKH6_9PEZI)

HSP 1 Score: 182 bits (462), Expect = 8.870e-51
Identity = 95/257 (36.96%), Postives = 155/257 (60.31%), Query Frame = 1
Query:   61 LVIGGNRGLGLEIVRHLKERQSNVMATTRK-TNEDLEAI-GVKVIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILTPDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGGSVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMKTSMTE-IYADKY-DELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESLGLGVYALDNPSEYGPFCELPW 819
            L+IG  RGLG  +     ++   V  T R  T++D ++  G + +  +D+S  ++G T+    ++     +++D +I +AG    ++ D P + A +KMY+   +GP+  +Q L  +GLL++GSK+ +V+SE GS+GLR E EGG NYGHH SK A NM+GK+ +LD+K  G+A+  +HPGFM+T MT+ +  DK+ D+ GA+ PE AA  +V+ V+   +  TG++ AP+G   +G     L    +     +LPW
Sbjct:    6 LIIGATRGLGSSLAHEYLQKGYTVYGTARSPTHQDADSSKGTRWVPNVDISTENAGQTIASHFKQDSNSTDSIDVLIVSAGYFGKESFDAPDFQAQLKMYQTSAIGPVFLVQQLFKAGLLKQGSKVVLVSSESGSIGLRHESEGGGNYGHHASKAALNMVGKLLSLDLKDEGVAVAIVHPGFMRTEMTKSVGFDKFWDKGGAVVPEAAAKSLVEWVDTFDIGKTGQYWAPRGPGDIGTAEDVLGPKDKLSTPLQLPW 262          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig854.19907.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LLN6_ECTSI5.560e-15680.66Oxidoreductase, short chain dehydrogenase n=2 Tax=... [more]
A0A1X6NYS2_PORUM1.850e-7349.23Uncharacterized protein n=1 Tax=Porphyra umbilical... [more]
A0A7S1ESF3_9RHOD1.170e-6144.62Hypothetical protein n=1 Tax=Timspurckia oligopyre... [more]
A0A0F7SXX7_PHARH3.130e-5241.15Short chain dehydrogenase reductase family superfa... [more]
V2XTU7_MONRO4.250e-5242.13Short chain dehydrogenase reductase family superfa... [more]
A0A1E3I5S4_9TREE1.540e-5140.00Cytoplasmic protein n=2 Tax=Cryptococcus depaupera... [more]
A0A0S6XBS5_BLOB13.030e-5136.72Uncharacterized protein n=1 Tax=Fungal sp. (strain... [more]
A0A8H3IKQ9_9LECA3.560e-5137.69Uncharacterized protein n=1 Tax=Heterodermia speci... [more]
UPI0004407C9C3.780e-5139.92NAD-binding protein n=1 Tax=Fomitiporia mediterran... [more]
A0A6A6BKH6_9PEZI8.870e-5136.96Uncharacterized protein n=1 Tax=Aplosporella pruni... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig854contigM-pyrifera_M_contig854:21082..30365 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score456.4
Seed ortholog evalue9e-126
Seed eggNOG ortholog2880.D8LLN6
Hectar predicted targeting categoryother localisation
EggNOG free text desc.cellular detoxification of aldehyde
EggNOG OGsCOG1028@1,KOG1611@2759
COG Functional cat.IQ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size1392
Cds size816
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig854.19907.1prot_M-pyrifera_M_contig854.19907.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig854 21652..30359 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816762.9983544-UTR-M-pyrifera_M_contig854:21081..216511622816762.9983544-UTR-M-pyrifera_M_contig854:21081..21651Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig854 21082..21651 -
1692278163.8509736-UTR-M-pyrifera_M_contig854:21081..216511692278163.8509736-UTR-M-pyrifera_M_contig854:21081..21651Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig854 21082..21651 -
1622816763.0899599-UTR-M-pyrifera_M_contig854:30359..303651622816763.0899599-UTR-M-pyrifera_M_contig854:30359..30365Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig854 30360..30365 -
1692278163.9249206-UTR-M-pyrifera_M_contig854:30359..303651692278163.9249206-UTR-M-pyrifera_M_contig854:30359..30365Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig854 30360..30365 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816763.0097694-CDS-M-pyrifera_M_contig854:21651..217831622816763.0097694-CDS-M-pyrifera_M_contig854:21651..21783Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 21652..21783 -
1692278163.8637338-CDS-M-pyrifera_M_contig854:21651..217831692278163.8637338-CDS-M-pyrifera_M_contig854:21651..21783Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 21652..21783 -
1622816763.0206974-CDS-M-pyrifera_M_contig854:22072..222621622816763.0206974-CDS-M-pyrifera_M_contig854:22072..22262Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 22073..22262 -
1692278163.873268-CDS-M-pyrifera_M_contig854:22072..222621692278163.873268-CDS-M-pyrifera_M_contig854:22072..22262Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 22073..22262 -
1622816763.0346525-CDS-M-pyrifera_M_contig854:22651..227941622816763.0346525-CDS-M-pyrifera_M_contig854:22651..22794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 22652..22794 -
1692278163.8828385-CDS-M-pyrifera_M_contig854:22651..227941692278163.8828385-CDS-M-pyrifera_M_contig854:22651..22794Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 22652..22794 -
1622816763.0472364-CDS-M-pyrifera_M_contig854:23554..236151622816763.0472364-CDS-M-pyrifera_M_contig854:23554..23615Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 23555..23615 -
1692278163.8951378-CDS-M-pyrifera_M_contig854:23554..236151692278163.8951378-CDS-M-pyrifera_M_contig854:23554..23615Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 23555..23615 -
1622816763.0642126-CDS-M-pyrifera_M_contig854:25075..252031622816763.0642126-CDS-M-pyrifera_M_contig854:25075..25203Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 25076..25203 -
1692278163.9045255-CDS-M-pyrifera_M_contig854:25075..252031692278163.9045255-CDS-M-pyrifera_M_contig854:25075..25203Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 25076..25203 -
1622816763.0767257-CDS-M-pyrifera_M_contig854:30197..303591622816763.0767257-CDS-M-pyrifera_M_contig854:30197..30359Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 30198..30359 -
1692278163.9137359-CDS-M-pyrifera_M_contig854:30197..303591692278163.9137359-CDS-M-pyrifera_M_contig854:30197..30359Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig854 30198..30359 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig854.19907.1

>prot_M-pyrifera_M_contig854.19907.1 ID=prot_M-pyrifera_M_contig854.19907.1|Name=mRNA_M-pyrifera_M_contig854.19907.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=272bp
MASSDAAGAPATPLPGNCLVIGGNRGLGLEIVRHLKERQSNVMATTRKTN
EDLEAIGVKVIEGIDVSDSDSGTTLVEAVREQLGDGETLDYVICNAGILT
PDTLDDPKYDAAVKMYEVCVLGPLRALQSLTMSGLLREGSKIGMVTSEGG
SVGLRTEIEGGSNYGHHMSKCAQNMMGKIFALDVKPRGIAIVCLHPGFMK
TSMTEIYADKYDELGAIGPEQAAPGIVKAVEDLTLETTGRFVAPQGSESL
GLGVYALDNPSEYGPFCELPW*
back to top

mRNA from alignment at M-pyrifera_M_contig854:21082..30365-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig854.19907.1 ID=mRNA_M-pyrifera_M_contig854.19907.1|Name=mRNA_M-pyrifera_M_contig854.19907.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=9284bp|location=Sequence derived from alignment at M-pyrifera_M_contig854:21082..30365- (Macrocystis pyrifera P11B4 male)
AGAACGATGGCATCTTCAGACGCCGCCGGTGCACCGGCCACGCCGCTCCC GGGAAACTGCCTGGTCATCGGTGGGAATCGTGGTCTGGGCCTCGAGATTG TGCGGCACCTCAAGGAGCGACAGAGCAACGTCATGGCCACGACGAGGAAG ACCAACGAGGACCTTGAGGTGATGAGCCCCTCCTTCCCTGCGCTGACTGC GCAACATGCTGCTGGTACTATATTGTTGTGCTCACGTACATAAACCAGCA GCAGCAGCAGCAGCAGCAGCAACAGCAGTGTGTCCCATGGAGAGTTGCTG CCGCTGGGTGGGATGGGTACCTGCTATCTGGATTAAATATAATCTTTCAT TTCAGAACTTAAACAAAATAAATATATTGTCTTTTCGTTCTTATTTTTTA GTCTTGCTCGTGTCGTTGTGTTCTCGTACCCGGTACGCTGGCATTTCACT TGCTTCACCCGTGAATTTGCGATGTTTTCGTTTGTTTTTAGCCTCCCTCT GTCTGTCTCACAGTCTGTAACGACATCGTTAGTATATCTCTACGACAGGG AATCAGGACGGACACTGGGTGTATTGATGAAGCTGGGTAGAAAGGACGAT TTAATGTGAAGACAAACACACACCGTGTACCATCTACCTGGTACCTTTTA TCTCTCTGGACGGAAATATAAGAACCATTTGGACTCTGATATGAATATCA AACGGAGCTTATGTTCCTGGTCAGATTGGTATTGTATAATGCACGAACAA TCAGTACTCGTATAATTAGGGCGTCTTTTGGGATACAACTGCGGTAGCAA GTGTCTCCATTCCTTCTCAATGTCTTCGTGTCTTTTTTTTTTTTTTTGTC TCGCCTCACGCGCTGTATCCAAACCACCGCCCCTGCGCAACGCGGCCGGC CGTGTCTCCAGTGTAGAGACAGGATCCCTTAGGCGCTTGCAGCTGTTGCT GTCACGGCAATGAAACGATTGAAGAGGCCTATCGCCGCCGCCAGCTTGCC AAACTCTTCCCCTGCACGAGTCGGGCCAGGGGACCACACTTGTGGAGGGA AGATGCCCTCGAATGGAAGAACATTATAGCGGCCTTTTGCCTGCTCTTTA GTTCTTGTTGCTTTTCGTTGTTTATAGCCAGCTGTTTGCCCTGCGTGGAG CGATTGCTTACGACCTTCGAAAGTCAAGACTAAGGGCCGTTATTATTGGA TTTTTTTTCCCCCCATGTTTTATGAAGCACGTTCCCACTTTTTTTTGTAA TTTTTGTCTCTCCTGCGCCTTCTGTTGAACATCACACATTAAGAAATTAT TTCACAGATATTGGAAATTATTTCACAAACTCTGGAAATTCTGGCTCTCC GATAATAACTGCCCTAAAAATCGTCTCATAGACAGAGCTATGATCAACCC TATACCTGGTATATTACTACTGTATTACGGGGTCCATAGTTAATGGGACC AAATCTTGTTAGTAGAAATAGGTAAATATATAGGTTTTTATGTATACCAT AGGTCCTATTAACTATGGACCCCCGTAATAGTACGAAGTTGTTACGATAT ACAACTGTAGTAGACCACACGCAATCATTGTGTGTTTTAACTCCTACTTG CCTGCACCCCACGAGTTTGGGTACATTCTGCCTGGGGTTAATAATATCAT TTTTGGAAGTAGTAAACGGGTTGAAGCTCACAGTAGGAGTCAGTCGCCAC ATCGGTCCTATACAAACGTGCCCAACACCACGGGGTGGACCAAGCCTAGT TTTTTTCGGCGGTCGGTCACCGCTGGCGACCGAGTTATAGTTCATTTGTG CGGGGTGGAGAACCTACACCCCGCGCAAAAGGAAGGATCGTATCACGTGG TGTCTATGGTAAGGCACCCCCGAGGCAGTTCCATAGCACCCCCATTGCTG TCACTGGAAGTGGCCACATCGGAAAATATTACTAACTCTTCGAAGCTGTC ATCCGTATGCAATGAGGTCCGCCTTACAAGCGGTTCTTAGTAGTGATAAG ATGCAGCTCACCCTTCGTGCGACTCGCCGGACACTCACGGCGCTTCACGC TTGACGCAAGCAAAATGTCTGCCTGGTCGGTGAAAACCCGGCGTGCTCTG CCCCGGCGTGCTCTGCCCCGGCACTACAGGGATGGGAGGGTCTATGGCCT AACGATACGACTACTGCCATGCGTGACATCGAGTACACCCCCCCCCTGAG CGGCAGGATCTAGGGGACGTATTGGGTGACGGATCTCCGAAGACGTCGTG CCCTTCTACCCAACATTTGATCCGCTTTTTGGAGGCCTGGGAGATACAGT ACATGTTCTTTGGGAATATCGTGGAAGTGCTTGTGTAGGAGAAGCGACCG AAGTGAGACGGGAGCCCGTTCCCTGCCGACGACGCGCAATGTAACGATGT CGCCTTCCAGGGATATAACTATTACGGGGGGGCATAGTAAATAGGACCAA ATATTGTTAGTAAAAATAGGGAAATGTACAGGTTTTTGTGTGTACCATAT GTCCTATTTACTATGGTCCCCCGTAATAGGCACCTGGGGCGTGATGCAGC GCACCACGAGGTGCAGCCCCCCGTAGGGCCCCCTGGAAGCAAAAAATGGA CATACATGCGCGAATTTACTCAACATTTGCGTCTCTTGTACTCTGCGCAC TCCGGAATACTGGGAAAAGGGTTCCCGTGTGTTCAAGAGGCGTTAATATC ACGGGGTTACTTAATTAAGCGCATTTCCTCATTAAAATCATGGAGCAACC AAACACCTTTTCCTCTAAATATGTGCGAGTTTTGGAAGGCTTGTTTCATC CTCGCACAGAGGAAAACGTGATACCTTTAGCCTATTTATTAAAGAAGGAA AACCGCGCAGGATTTCGGAATGAAATTTTCGAATGCGCCTGCAGCGAAAA CAACACCCAAAAATGTTTCGCCTACCAGGTATGGCGAAGACAGGTCCTTT TTCGTTTTCTCGCCTTCGACGGAATTAGACCCGCACATGCCCGTGTTGAT CTGGTGCGCTGACCGGAATTCTGAGGGAAAAATGGTGCGCCAGAGCTACA TTTTGCCACACAATAAAAAAATATCCCTGTGCCCTACTACACTAAGCTAC ATCCCTAATCCTATCTCTACAGTACACTGGTTGAATGAAAAGCCAAACAC AATTGGCAGAGGCAGGGTTAAGGTTTAACCTTATGTAAGTGGCTGGCACC CTCTGACCGACGTCCATCATTACGCTGACCGTAAGTACATACCATCCGTG TGATCGCTTCAAGGCTTGAGGCATGATTTCAAGGCATTATCTCTTAGACC CCTACACGACAATATTGACCTTTGGCGCACGATCCCTTCTGCGCTTTGCG CCTCGGGCACTACCTCTAAGACAGGCAGACTATCACCGTGTGTATTCCAC GGCGCAGGCTGTGGACTCCGTATTGTAGATAATCTCCAAAGCTTGCCCTC GCAGACTTCGCGCTAGATCGCGTGATCCAGCTTTTGGGCCGTGTGGGAGA GGTTTACATTGTTCCCGGCAATTCACGGTGCAGTCTGTTTATTGTCATGC ACGGACGATCACCTGTGGAAGACAAGAGGTCAGCGATTTTTAAAAAAAAT GTGTAGTTGTTGCGGCAACTCCTGGTATTCGGTCCTCGCCGACTCGGGGC TCATGACCTATAGCTGGAGCCCTTGGTGGGCCCGTTTACGGAGCTCGCGT TTGTGTTCCACGCACGCTGCGGCGACTTTTGGCAGCACCAGGAGAAGCGA CCCTCGTCATGTCGATGGTGTGTAGTCTGTGATCTCCCCTTGTCGTGGAC TGTATCTCCCGGTCGCCGCCGGGCGGTCGCCGCTAGGAGCCTGATCCATC GGACGGCCCTTGTTAGTACGCGCGTTTTCCCTTCGACCGGGCCTATGTGC GTTGATCGTTCATGTTTGGCCCGTAACCCTCCCTCCAATAAGTTAACAAG ACTACAAAGAGTGCTCTTTGGAGGGAACGATCCTGTTTGCCTTGACCTAT AGTCTTTCCGCCGACACTGCAGCAGCAGTAGTAGCCCAGGAAAAAACGGG TTCCTCTTTGGAGAGAACGATCCTGCTCCCTAAAAACATCCAAACATGAA GCAGTATATAAGCATAGTCAAGCTGTTGTGGTGTGTTTTGAGCCCGCTAC ATACGAGTTCAAGACGTAGTGATTCATGAAGAGATGCGCCGAAAAATCCC GCTAGCGCCGGCACAATTGGCGAGTATATACCGTTTGCACGCTGCTCTCC CTAACACCAACCTGACGTGATACCAGCGGCAGGCACGTTAGCATGCAGCG CCGCGCCTTGAGGCGTCCAACAGACTGGGGCACTCGCCGTCAACGTATTC CGGTAGTTTTTTTTTTGTTTCAATCCCCTAGCGGGGTGGTAAAGATAAAT GTTATCCTACCACATTTCCGTCATATGATACGTGTAGTGTGTCAATTTAA CCCGTCCGTTCAAACGTATGGTGAATATGCTCGACGCGCACATCTACCGT CTCATTATTTTGACAGCGCCTGTTTTTTGCGCCTTTTCGGTTGTCTCCTC AGCACAAGAGTTTTTTTATCGTGTTTACTCTCCTCGTACATACCTGGTAT GTATGACTGCTGCAGTGTATTGTGTGCTATTATATTAGTATAGTACGTTG TTTGTTTTTACTGCAGCTGAGACGATGGTACTCGACCAGCAGTGAGAATG CTGAACCCCTGCTCGACAACAGTCAAGGCATGCACCCAAGTACAGTTCGC GGGGGCGGGGAGGGGAAGGCCTCTCTAACCGCGAGATCTTATTCCAGGAA GATCGAACAGCGCGAAGACTCCCGAATGTTCGAGCAGATTGAACAGAAGA GTAAACGCAACGAATCCAACACGAACATTTAATCTGCTACACGAAGCGAT CATACGGCATACAAGGCCCCTCTCCTGGACGTGCCTGGAGGGGGAGTGAC GCAAGAACTCACTGCAAAAGCGCCCAACGCTGACTAAATAAGCAAATAAC TGCCAGGTACCTGGTATGTACCATCAAATGTAGCGGCCCTGGGTCTATAT ATAGGCAACCTTCAATCTGGTTCGATGTTCTACGGCATATACGCGTCCGT CCTACCTCTGACCATAAAACCCCCCGGCGAAATTGATGCGCTGGCGGTGC CGAACCAAGCAGGCGATCGGGGTGAAGGTGATCGAAGGAATCGACGTGTC GGACAGCGACTCCGGCACCACGCTGGTAGAGGCCGTGCGCGAGCAGCTGG GCGATGGCGAAACTCTCGACTACGTCATCTGCAACGCCGGGTGAGTCGTC ACCCGCAGTCCGGATTTTGGACTCTCGGGGCAGGACGTACGTAGAAGCAC TTCTTCGCCGCGTTGTATCTGGTCTGCCGTAGTTCAGTGGCACGCTCGTT AGTGGTTACAAGTGTCCACACCTCGCACAGATCACCGATTCCCACGTCAT GATGTACATCTTTCAAGGCAGATCTATTCCCGATGTTGTATATATGTACA GTTGCTCATGTTGCCGGCTGGGACCCATTGAATCTGCATGATCTATCTAG CACACGTTTCCTGAGTTGGATCTGTACTACACAGATAAATCCTGCACAGC CTCCCACAACGATGGGTGAGGAACTAGTTGATGATCTGTGCACTGTAGAT CATGCTCTGTCCGAGGCGTGCAGGTGTCGATGTCCACGTTTGTTGGTACA ATATCTGCTGGAGTCTTATCGCGGTGCCTGAACATCACGCACCCGTATGT ACGCACTGCAGACGTTTTTCCAAGCCGATGCTGTCTTTTGGGCGAATGCG AAAGATTGTCAAGGTACACGTCGTTTTTCTGTTTTTCTCATTGTGTCCGG ACGTATGTATGCACGCGCAATATGAACTCCGATCAACCTTGGGCGCGCCC ACGTGCGTGGGGAAGGGTAGTATCGTTTGCTCGAGGAGGGGCATGCGGAG ATAAATATGCCGAAGCTCGAAGGGGGTACGGACGAGGGCGCGTCGTTCTG TTTTGTTCTTGGGGTGTGTGGTCGTGGTAACATTTTTCGCAGTCTCCATC AATTTTTTGTTTTCTGCGGCTTTACCACACAAGGCGCCCCGAGAATCACG ATGGTATGGAGAACGGGGCGAGTCGACACGTAGATCTTGGCACACCATGT ATATGTGCCAACCACGAAGACAAAAATGCCAGGCGTAGCAATCTGCAATC AGTGGGCGTCGGTTGGTCGGCACTACTGGAACCCGCCAGGTATAGATAGC CCCGTTAAATCCTCACGCGGAAGGTCGGAACATATGAACACCGCCCCGGA ACTGTGGGATCTCCCAAGAGCTCCCCGGCGCACTTTTCCTTGAATGTCAA CTGCACCTTTTAGCCTGAAACGACAACGAAGGAAAGCTGAATCGCCGTCC TCGTGAAGGCGTTTCGGCGAGGGCGACTATTCGATCGCCGATCCTTGGTC CCCTTCTGGCTCAAGCCCGTGTGCCAACTTGGCCATACGAGGCATCCGGG GTGCAGGCAGCCGGGGTGCAAGTACAAGGACTCTACAGGAACCACAACAC AATTGATGGATTTGTTCAACCCGCCGTCACCTTATTTATTATCACGCCCT TTGAACCTGTGGTCTGGCGGAATGCCTGCCAAGCTAATGCAAACTTGCCA TTTTCATATCTGAATTTTTACCAGTGTCTCGCTCTCTTTCATGAGATACT GTGCGCCCCCCCCCCCCCCGCCTCTTCTCCTTCCCTCCTCACCCGAGCAG AATACTGACCCCCGACACACTGGACGATCCCAAGTACGACGCAGCCGTCA AGATGTACGAGGTATGCCAACTTCTGCCTTGCGAGGTTGCGATGGGTCGC GCCGCGGAGCAGGGATGGCGTCACTGCTGTCTGTAGTTGCCGTAAGGGTC TCAGCCCTCAACCCCGCCCGAAATCCTGTCTCCGGGCAAGGTCTTCGCCA TCGACTGCACGTTTGACTAATGATTATTATGCCCTTTCGCCCTTTTTTGT TGTTGCTGTAGCTATCAACAACGGCAAGGAGCCCCTTTGAAGGCGTTACA GACGCGCAGTCAGTGTCTTGATAAGAACAAGCGAGGTTGTGCGTGGATGC AAGTATCTCCATGCTCCCGTGACACCGCAACAACTTACTGTTAGCAGTGC GTCTATTCCGGGGGACCATAGTAAATAGGACCAAATATTGTTAGTAAAAA TAAGGAAATATATAGGTTTTTGTGTTTTCCGTGGGTCTTATTTACTATGA TCCCCCGTATTAGTGCGACAGCACGAATGACATCAGGGTACCGATACCAG TATCGCCTCCACATCAACGCACGTGGATGGCATAAGACGTCTACCCGAAT AGGCGAAACGCTGCCAACGCGCGCACGAACACGACCCTATACGAGTCGCC CCCTTGTCGACCAAGCCCTGCGCAAAATAAGCGCCGTTCGTAGCGTGCAT GCTGGCACGGACAGAAAGCCGCTTACTCTACAGTAGTTAGCTACACACTT CCCAATAAATACAGTAGGATGGCCTGTTCTGACACCTGTTCTCTCCCCGA CTCTGTCTGTGCTGGTGCCAGGTGTGCGTACTCGGACCCCTTCGCGCGCT GCAGTCCCTCACCATGTCGGGGCTGTTGCGGGAGGGGTCCAAGATCGGAA TGGTAACGTCTGAAGGAGGTTCCGTCGGTCTGAGGACGGAGATCGAAGGC GGGAGCAACTATGGGTGAGGGCGCGCTTATGTTAGCATCGCCGGGGCGTA TCGGGGCTGGGGGGCGTAGAGAGACGTTCTACTCGGCCAGGACGTCTTCG CATGCGTATATTGCACACCTCTAACGAGCACATGTGATACGTGTTTGAGG GGGTTGATAAAAGTGTCTCGGTAGTGCCGTCCATACGGGCTGTTTGCGTC GTTCTCTAACTCGTCTCTGGAACCGCTAGAGCAGCAGGCACACGTGATAT CAACAGATCGACATCGTTTATTGCTGCTTCGCATACGCCCCCCCTCCCCC CGCCCGCCCCATCCCTGTAAATTATATCGCATGTCCTGCGCGTTTTTGTT GTCTCTCGGAACAAATGTGTGTGCGGGGCATTAAAATACCAACTGCACTG CAGGCACCACATGAGTAAATGCGCGCAGAACATGATGGGCAAGATCTTCG CCCTCGACGTGAAGCCCCGCGGCATCGCCATCGTCTGCCTTCACCCGGGC TTCATGAAGACCAGCATGACGGAGATCTACGCCGACAAATACGACGAGCT CGGCGCCATCGGTCCCGAACAAGCGGCTCCGGGCATCGTTAAGGTGACGC CTTAATCTTATGCATCCTTGAGGGCGCTACGCAACGCCATACGGTCCTTG GTACTCCGCTTCCCATGTGTGACGCCATACCAGTACATATTGTTTTGAAA AATTACACCCTCCGTATGACGCCATACTGGTGTCACAGGTGATGTCCACG AGCAAACTCGACCTGTGGTATCATATCCGCTTTTCGCGCACAATACAAGG ACGCGTGTACGCCCCCGACGCCTGCCCCCTTCACCCCCCTCCTCCTTCCG AACATATCGACGCGGACATTCCGTCCATGCAGGCTGTGGAAGATCTGACG CTGGAAACTACGGGCAGGTTCGTCGCCCCCCAAGGGAGCGAGAGCCTAGG CCTGGGCGTGTACGCGCTCGACAACCCCAGCGAGTACGGCCCCTTTTGCG AGCTCCCATGGTAGTTCAACGCCGTTCAATATCCATCGCGGTCGCGCAAT CGGTCCATCCTGTGACCACTCATATATTAACGTGTAGAGGGCTTGGAGCC CACGGGGCCAGGCGTGAGGCCGACGGAGTCGCTAGATGTAGGCGTGCTTG TGCGCGGGAACGGGGTGCTGAAAAGTTTCATGTCGTAGCGCTGGCCCAGA GAGGTACTGGTAGCAAAGTGTGTCTGCTGTGGGATTGTCCCACGGAAACT GGACCTTGGCGCGCTATATTCCACGTCTGTACCAGTTGTTGGGCGCGACG TTTTTGCTTGCTCAGTGGGACTGCTGCGGTGGTGGCGTAGGGCGAAAGGC GACGGCGGTACTATTTGTTGCTTTTTGTTGGGCGGCGCTGGCTGATGGTA TGGTACTTCGTGTAGGATTATAGATTATTAATACGACGTACGCACTTGAA TTGGTCAGCGTTGACGGGGCCGTGTTAAAAATTTGTTTACCCGGCAGCAA AGAAAGACTTCAGTACCTTTCCTCGATTGTACAATACCAGAGAGCGGCTC GTAAGCGTGTGCATGCTTTCTTTTTGTGTGTGAC
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig854:21082..30365-

>mRNA_M-pyrifera_M_contig854.19907.1 ID=mRNA_M-pyrifera_M_contig854.19907.1|Name=mRNA_M-pyrifera_M_contig854.19907.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1632bp|location=Sequence derived from alignment at M-pyrifera_M_contig854:21082..30365- (Macrocystis pyrifera P11B4 male)
ATGGCATCTTCAGACGCCGCCGGTGCACCGGCCACGCCGCTCCCGGGAAA
CTGCCTGGTCATCGGTGGGAATCGTGGTCTGGGCCTCGAGATTGTGCGGC
ACCTCAAGGAGCGACAGAGCAACGTCATGGCCACGACGAGGAAGACCAAC
GAGGACCTTGAGATGGCATCTTCAGACGCCGCCGGTGCACCGGCCACGCC
GCTCCCGGGAAACTGCCTGGTCATCGGTGGGAATCGTGGTCTGGGCCTCG
AGATTGTGCGGCACCTCAAGGAGCGACAGAGCAACGTCATGGCCACGACG
AGGAAGACCAACGAGGACCTTGAGGCGATCGGGGTGAAGGTGATCGAAGG
AATCGACGTGTCGGACAGCGACTCCGGCACCACGCTGGTAGAGGCCGTGC
GCGAGCAGCTGGGCGATGGCGAAACTCTCGACTACGTCATCTGCAACGCC
GGGCGATCGGGGTGAAGGTGATCGAAGGAATCGACGTGTCGGACAGCGAC
TCCGGCACCACGCTGGTAGAGGCCGTGCGCGAGCAGCTGGGCGATGGCGA
AACTCTCGACTACGTCATCTGCAACGCCGGAATACTGACCCCCGACACAC
TGGACGATCCCAAGTACGACGCAGCCGTCAAGATGTACGAGAATACTGAC
CCCCGACACACTGGACGATCCCAAGTACGACGCAGCCGTCAAGATGTACG
AGGTGTGCGTACTCGGACCCCTTCGCGCGCTGCAGTCCCTCACCATGTCG
GGGCTGTTGCGGGAGGGGTCCAAGATCGGAATGGTAACGTCTGAAGGAGG
TTCCGTCGGTCTGAGGACGGAGATCGAAGGCGGGAGCAACTATGGGTGTG
CGTACTCGGACCCCTTCGCGCGCTGCAGTCCCTCACCATGTCGGGGCTGT
TGCGGGAGGGGTCCAAGATCGGAATGGTAACGTCTGAAGGAGGTTCCGTC
GGTCTGAGGACGGAGATCGAAGGCGGGAGCAACTATGGGCACCACATGAG
TAAATGCGCGCAGAACATGATGGGCAAGATCTTCGCCCTCGACGTGAAGC
CCCGCGGCATCGCCATCGTCTGCCTTCACCCGGGCTTCATGAAGACCAGC
ATGACGGAGATCTACGCCGACAAATACGACGAGCTCGGCGCCATCGGTCC
CGAACAAGCGGCTCCGGGCATCGTTAAGGCACCACATGAGTAAATGCGCG
CAGAACATGATGGGCAAGATCTTCGCCCTCGACGTGAAGCCCCGCGGCAT
CGCCATCGTCTGCCTTCACCCGGGCTTCATGAAGACCAGCATGACGGAGA
TCTACGCCGACAAATACGACGAGCTCGGCGCCATCGGTCCCGAACAAGCG
GCTCCGGGCATCGTTAAGGCTGTGGAAGATCTGACGCTGGAAACTACGGG
CAGGTTCGTCGCCCCCCAAGGGAGCGAGAGCCTAGGCCTGGGCGTGTACG
CGCTCGACAACCCCAGCGAGTACGGCCCCTTTTGCGAGCTCCCATGGTAG
GCTGTGGAAGATCTGACGCTGGAAACTACGGGCAGGTTCGTCGCCCCCCA
AGGGAGCGAGAGCCTAGGCCTGGGCGTGTACGCGCTCGACAACCCCAGCG
AGTACGGCCCCTTTTGCGAGCTCCCATGGTAG
back to top