mRNA_M-pyrifera_M_contig85387.19904.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85387.19904.1
Unique NamemRNA_M-pyrifera_M_contig85387.19904.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Match: A0A517PKY3_9PLAN (Inner membrane protein YbiR n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517PKY3_9PLAN)

HSP 1 Score: 545 bits (1404), Expect = 1.170e-193
Identity = 287/287 (100.00%), Postives = 287/287 (100.00%), Query Frame = 1
Query:    1 QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 861
            QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS
Sbjct:   73 QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 359          
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Match: A0A517Q7Y1_9PLAN (Inner membrane protein YbiR n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517Q7Y1_9PLAN)

HSP 1 Score: 495 bits (1275), Expect = 5.020e-174
Identity = 255/287 (88.85%), Postives = 270/287 (94.08%), Query Frame = 1
Query:    1 QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 861
            QLGGFYGYV+QRVV+YDM P TLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNK LNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLL+ATPPCL GLALVWW+IVKVYRDQW + PGE +  ++ PF+RWQTLKG VIL LL+VCFMFAPWPRELLAL AAGVLLLSRTFYSR+VMGLVDWPLLVLFISLFIVN+AFQLAGGMDWLMSH  +AGISL EP+PLF+GTAVLSNLVSNVPAIMLLLPVVEG SMGALLALSSTLAGNFIIVGS
Sbjct:   73 QLGGFYGYVMQRVVMYDMPPTTLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKHLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLVATPPCLAGLALVWWIIVKVYRDQWMIEPGEGTTEDDRPFDRWQTLKGAVILFLLIVCFMFAPWPRELLALSAAGVLLLSRTFYSRNVMGLVDWPLLVLFISLFIVNQAFQLAGGMDWLMSHARSAGISLDEPMPLFLGTAVLSNLVSNVPAIMLLLPVVEGDSMGALLALSSTLAGNFIIVGS 359          
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Match: UPI0018D7F4ED (SLC13 family permease n=1 Tax=Gimesia panareensis TaxID=2527978 RepID=UPI0018D7F4ED)

HSP 1 Score: 463 bits (1191), Expect = 1.280e-162
Identity = 239/270 (88.52%), Postives = 254/270 (94.07%), Query Frame = 1
Query:   52 MAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 861
            MAP TLLAAVIALTG LSAILTNDVVCLAVAPLLSRLCLNK LNPVPFLLALACAAN+GSAATLIGNPQNILIGESLQLSFNRYLL+ATPPCL GLALVWW+IVKVYRDQW + PGE + +EE PF+RWQT+KG VIL LL+VCFM APWPRELLAL AAGVLLLSRTFYSR+VMGLVDWPLLVLFISLFIVN+AFQLAGGMDWLMSH  +AGISL EP+PLF+GTAVLSNLVSNVPAIMLLLPVVEG+SMGALLALSSTLAGNFIIVGS
Sbjct:    1 MAPTTLLAAVIALTGTLSAILTNDVVCLAVAPLLSRLCLNKHLNPVPFLLALACAANVGSAATLIGNPQNILIGESLQLSFNRYLLVATPPCLAGLALVWWIIVKVYRDQWMIEPGEGNAAEERPFDRWQTMKGAVILFLLIVCFMVAPWPRELLALSAAGVLLLSRTFYSRNVMGLVDWPLLVLFISLFIVNQAFQLAGGMDWLMSHARSAGISLDEPMPLFLGTAVLSNLVSNVPAIMLLLPVVEGNSMGALLALSSTLAGNFIIVGS 270          
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Match: A0A2E2C604_9PLAN (Anion transporter n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C604_9PLAN)

HSP 1 Score: 396 bits (1018), Expect = 5.710e-135
Identity = 206/287 (71.78%), Postives = 239/287 (83.28%), Query Frame = 1
Query:    1 QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 861
            +LGGFYG++  R+V++D++P  LLA+V    GALSA LTNDVVCLAV P+LS+LCL K+LNP+PFL+ALACAANIGSAATLIGNPQNILIGESL LSFN YLL A PPCLLGL ++W VIV  Y+ QW +     S   E PFN WQT KG V+L+LLV+ FM APWPRELLAL AAG+LL SRTFYSR+VMGLVDWPLLVLFISLFIVN+AFQLAGGM+W+M+ + AAGISL  P  LF+ TA+LSNLVSNVPAIMLLLP+  G+ MG +LALSSTLAGNFIIVGS
Sbjct:   73 RLGGFYGHITNRIVMHDLSPPLLLASVTGFAGALSAFLTNDVVCLAVTPILSQLCLRKKLNPIPFLIALACAANIGSAATLIGNPQNILIGESLNLSFNGYLLTAFPPCLLGLIILWAVIVYQYQGQWYIESAAVSEEVENPFNSWQTGKGLVVLILLVLGFMLAPWPRELLALGAAGILLFSRTFYSRNVMGLVDWPLLVLFISLFIVNQAFQLAGGMEWMMARSHAAGISLENPATLFLSTAILSNLVSNVPAIMLLLPLSPGAEMGPVLALSSTLAGNFIIVGS 359          
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Match: A0A350KGA3_9PLAN (Anion transporter n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KGA3_9PLAN)

HSP 1 Score: 391 bits (1005), Expect = 5.360e-133
Identity = 206/287 (71.78%), Postives = 237/287 (82.58%), Query Frame = 1
Query:    1 QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 861
            +LGGFYG++   +V +D++P+ LLA+VI   GALSA LTNDVVCLAV P L +LCL K LNPVPFL+ALACAANIGSAATLIGNPQNILIGESL+LSFN YLLIA PPCLLGL +VW V+V  Y+ QW +    +    E P+N WQT+KG V+L LLV+ FM APWPRELLAL AAG+LL SRTFY+R+VMGLVDWPLLVLFISLFIVN+AFQ AGGMDW+MS + AAGISL  P  LF+ TA+LSNLVSNVPAIMLLLP+ +G  MG LLALSSTLAGNFIIVGS
Sbjct:   73 RLGGFYGHITNCIVNHDLSPSLLLASVIGFGGALSAFLTNDVVCLAVTPSLIQLCLRKSLNPVPFLIALACAANIGSAATLIGNPQNILIGESLKLSFNGYLLIALPPCLLGLIVVWGVLVFQYQGQWFIESAVALDDSENPYNFWQTVKGLVVLTLLVLGFMLAPWPRELLALGAAGILLFSRTFYARNVMGLVDWPLLVLFISLFIVNQAFQQAGGMDWMMSRSHAAGISLENPATLFLSTAILSNLVSNVPAIMLLLPMTQGGEMGPLLALSSTLAGNFIIVGS 359          
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Match: A0A517W0K7_9PLAN (Inner membrane protein YbiR n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W0K7_9PLAN)

HSP 1 Score: 389 bits (998), Expect = 6.840e-132
Identity = 200/287 (69.69%), Postives = 235/287 (81.88%), Query Frame = 1
Query:    1 QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 861
            QLGGFYG   +RVV  DM+P  LLA VI+LTGA SA+LTNDVVCLAVAPLLS LC+ K+LNPVP+LLALACAANIGSA TLIGNPQNILIGE+L++ FN YLLIA PPCLLGL +VW +IV +YR +W      S  + E  F+RWQT KG ++L LL+ CF+F  WPRELLAL AAG+L+LSR F+SR +MGLVDW LLVLFISLFIVN+AFQL GGMDWL++ T +AGI L +P PLF+ T +L NLVSNVPAIMLLLP+V+GS +G LLALSS+LAGN IIVGS
Sbjct:   73 QLGGFYGIATKRVVAQDMSPPALLAVVISLTGAFSALLTNDVVCLAVAPLLSHLCIEKKLNPVPYLLALACAANIGSATTLIGNPQNILIGEALKVPFNGYLLIAMPPCLLGLLIVWGIIVSLYRGKWHFETEASLENTEIEFDRWQTFKGILVLTLLIACFIFTAWPRELLALGAAGILMLSRKFHSRKIMGLVDWSLLVLFISLFIVNKAFQLTGGMDWLVAQTESAGIPLDQPAPLFISTVILGNLVSNVPAIMLLLPIVKGSDVGPLLALSSSLAGNLIIVGS 359          
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Match: A0A518IA88_9PLAN (Inner membrane protein YbiR n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IA88_9PLAN)

HSP 1 Score: 383 bits (984), Expect = 8.230e-130
Identity = 200/286 (69.93%), Postives = 237/286 (82.87%), Query Frame = 1
Query:    4 LGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 861
            LGGFY  + +RVV+ +MAP TLL  VIA++  LSA+LTNDVVCLAVAPLLSR+CL+K+LNPVPFL+ALACA+NIGSA TLIGNPQNILIGESL+LSFN Y LIA PPCLLGL +VW VI  +Y+ QW +   E     E  F+RWQT KG +IL++L+ CF+FAPWPRELLAL AAG+LL+SR FY+R VMGLVDWPLLVLFISLF++NE+F+L GG+ WL+S T AAGISL +P  LFV TA+LSNLVSNVPAIMLLL +V G+ +G LLAL STLAGN IIVGS
Sbjct:   74 LGGFYTLITRRVVMCEMAPGTLLGVVIAVSAVLSAMLTNDVVCLAVAPLLSRMCLSKQLNPVPFLIALACASNIGSATTLIGNPQNILIGESLKLSFNHYFLIAVPPCLLGLLVVWAVIRHLYQGQWLIEAKEILDDTETRFDRWQTGKGVLILVVLIGCFVFAPWPRELLALGAAGILLMSRKFYTRKVMGLVDWPLLVLFISLFMINESFELTGGLKWLVSQTEAAGISLDQPSHLFVTTAILSNLVSNVPAIMLLLQIVPGAEVGPLLALGSTLAGNLIIVGS 359          
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Match: A0A7C4HSN8_9DELT (Anion transporter n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A7C4HSN8_9DELT)

HSP 1 Score: 303 bits (776), Expect = 2.490e-98
Identity = 166/287 (57.84%), Postives = 203/287 (70.73%), Query Frame = 1
Query:    1 QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 861
            +LGGFY +V +R+      P+ LLA +IA+   LSA+L NDVVCLAVAP+L   C  +RLNP+PFLL LACAAN+GSAATLIGNPQN+LIG+ L+LSF  YL  A  P LLGLA  W VIV +YR +W      S P   P FN WQT KG  ++++L+  F+ APWPRE++AL AAGVLLLSR   SR ++GLVDW LL LF+ LF+VN A   +G +   M+   AAG+ + +PVPLF+ T VLSNLVSNVPA MLLLP       G +LALSSTLAGN IIVGS
Sbjct:   73 RLGGFYSHVTRRLAAAKAGPSALLALLIAVVALLSALLANDVVCLAVAPVLVEGCARRRLNPIPFLLGLACAANVGSAATLIGNPQNMLIGQVLKLSFGGYLATAAVPSLLGLAATWAVIVGLYRKKWEKVTAVS-PVAAPAFNPWQTGKGMAVIVILIAAFLLAPWPREVMALAAAGVLLLSRRMASREMLGLVDWQLLALFVGLFVVNRALAESGMLARGMAAVGAAGVDVRQPVPLFIVTVVLSNLVSNVPATMLLLPAASHPLAGPILALSSTLAGNLIIVGS 358          
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Match: UPI0011854ECA (anion transporter n=1 Tax=Vogesella urethralis TaxID=2592656 RepID=UPI0011854ECA)

HSP 1 Score: 299 bits (765), Expect = 1.290e-96
Identity = 167/290 (57.59%), Postives = 206/290 (71.03%), Query Frame = 1
Query:    1 QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAP---GESSPSEEPPFNRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 861
            +LGGFY +V +R+    + P  LLA +IA+T ALSA+ +ND+VCLA+AP+L   C  +RL PVPFLLALACAANIGSAATLIGNPQN+LIG+SL+L F  Y L A PP LLGL L W VI  +YR +W  A    G+ SP E+ PF+ WQT KG  + L L+V F+ APWP E LAL  AG+LL+SR  +SR ++GLVDW LLVLF+SLF+VN A Q  G     ++  A+AG+ LS    LF  T +LSN+VSNVPA+MLLLPV      G LLAL STLAGN +IVGS
Sbjct:   73 RLGGFYDWVTRRLAALAIQPPQLLAVLIAVTAALSAVFSNDIVCLAMAPVLVDACKQRRLAPVPFLLALACAANIGSAATLIGNPQNMLIGQSLRLPFAGYFLDALPPVLLGLVLSWAVIAWLYRGRWQAADNAAGDDSPREDVPFDAWQTGKGLAVALALLVGFLVAPWPAEHLALIGAGLLLMSRKLHSRHMLGLVDWELLVLFVSLFVVNSALQHTGVTAQAIASLASAGVDLSHTGTLFAATFLLSNVVSNVPAVMLLLPVTPAEGGGLLLALVSTLAGNLLIVGS 362          
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Match: UPI00083118A8 (anion transporter n=1 Tax=Comamonas terrae TaxID=673548 RepID=UPI00083118A8)

HSP 1 Score: 298 bits (762), Expect = 4.010e-96
Identity = 164/292 (56.16%), Postives = 204/292 (69.86%), Query Frame = 1
Query:    1 QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPLLSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNRYLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPF-----NRWQTLKGTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLLVLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLVSNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS 861
            +LGGFY ++  R+    + PA LLA +IA+   LSA+ +ND+VCLA+AP+L   C+ + L+P+PFLL LACAANIGSAATLIGNPQN+LIG++L LSF  Y + A  P L GL L W VIVK  R QW + PGE +    P       NRWQT KG VI L++++ F+FAPWPRE++AL AAGVLL+SR   S  ++GLVDW LLVLF+ LF+VN+A Q  G    L+S  AA G+ L  P PLF    VLSNLVSNVPA+MLLLPV      G LLAL+ST AGN +IVGS
Sbjct:   73 RLGGFYDWITVRLSALPVTPAALLAVLIAVVALLSAVFSNDIVCLAIAPVLVDACMRRNLDPIPFLLGLACAANIGSAATLIGNPQNMLIGQTLHLSFGAYAVEAAAPVLAGLVLTWMVIVKSVRRQWQL-PGEKASGARPEMEMRALNRWQTGKGLVIALVILLSFLFAPWPREVVALTAAGVLLMSRRLSSSRMLGLVDWELLVLFMGLFVVNDALQRTGMPAQLVSDAAALGLHLDHPAPLFGAAFVLSNLVSNVPAVMLLLPVAHHPMAGTLLALASTFAGNLLIVGS 363          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85387.19904.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PKY3_9PLAN1.170e-193100.00Inner membrane protein YbiR n=6 Tax=Gimesia TaxID=... [more]
A0A517Q7Y1_9PLAN5.020e-17488.85Inner membrane protein YbiR n=1 Tax=Gimesia panare... [more]
UPI0018D7F4ED1.280e-16288.52SLC13 family permease n=1 Tax=Gimesia panareensis ... [more]
A0A2E2C604_9PLAN5.710e-13571.78Anion transporter n=4 Tax=Planctomycetaceae TaxID=... [more]
A0A350KGA3_9PLAN5.360e-13371.78Anion transporter n=1 Tax=Planctomycetaceae bacter... [more]
A0A517W0K7_9PLAN6.840e-13269.69Inner membrane protein YbiR n=2 Tax=Gimesia aquari... [more]
A0A518IA88_9PLAN8.230e-13069.93Inner membrane protein YbiR n=2 Tax=Gimesia TaxID=... [more]
A0A7C4HSN8_9DELT2.490e-9857.84Anion transporter n=1 Tax=Deltaproteobacteria bact... [more]
UPI0011854ECA1.290e-9657.59anion transporter n=1 Tax=Vogesella urethralis Tax... [more]
UPI00083118A84.010e-9656.16anion transporter n=1 Tax=Comamonas terrae TaxID=6... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85387contigM-pyrifera_M_contig85387:3..863 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score288.1
Seed ortholog evalue4.5e-75
Seed eggNOG ortholog765911.Thivi_3898
Preferred nameybiR
Hectar predicted targeting categorysignal peptide
EggNOG free text desc.Citrate transporter
EggNOG OGs1NEVR@1224,1RQVD@1236,1WXGB@135613,COG1055@1,COG1055@2
COG Functional cat.P
Best tax levelChromatiales
Best eggNOG OGNA|NA|NA
Exons1
Model size861
Cds size861
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816762.780669-CDS-M-pyrifera_M_contig85387:2..8631622816762.780669-CDS-M-pyrifera_M_contig85387:2..863Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85387 3..863 +
1692278163.6826143-CDS-M-pyrifera_M_contig85387:2..8631692278163.6826143-CDS-M-pyrifera_M_contig85387:2..863Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85387 3..863 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85387.19904.1prot_M-pyrifera_M_contig85387.19904.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85387 3..863 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85387.19904.1

>prot_M-pyrifera_M_contig85387.19904.1 ID=prot_M-pyrifera_M_contig85387.19904.1|Name=mRNA_M-pyrifera_M_contig85387.19904.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=287bp
QLGGFYGYVLQRVVLYDMAPATLLAAVIALTGALSAILTNDVVCLAVAPL
LSRLCLNKRLNPVPFLLALACAANIGSAATLIGNPQNILIGESLQLSFNR
YLLIATPPCLLGLALVWWVIVKVYRDQWTVAPGESSPSEEPPFNRWQTLK
GTVILLLLVVCFMFAPWPRELLALCAAGVLLLSRTFYSRSVMGLVDWPLL
VLFISLFIVNEAFQLAGGMDWLMSHTAAAGISLSEPVPLFVGTAVLSNLV
SNVPAIMLLLPVVEGSSMGALLALSSTLAGNFIIVGS
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mRNA from alignment at M-pyrifera_M_contig85387:3..863+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85387.19904.1 ID=mRNA_M-pyrifera_M_contig85387.19904.1|Name=mRNA_M-pyrifera_M_contig85387.19904.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=861bp|location=Sequence derived from alignment at M-pyrifera_M_contig85387:3..863+ (Macrocystis pyrifera P11B4 male)
CAGCTGGGAGGCTTTTACGGATATGTGTTGCAGCGCGTGGTGCTGTATGA CATGGCGCCCGCGACACTGCTGGCTGCAGTGATTGCTCTAACCGGGGCAC TCAGTGCGATTCTGACGAATGATGTTGTCTGTCTGGCAGTTGCACCACTG CTGTCTCGTCTGTGTCTCAACAAACGGCTCAACCCCGTCCCGTTTCTGCT GGCCCTGGCTTGTGCAGCGAATATCGGCAGTGCAGCCACGTTGATTGGCA ATCCACAGAACATCCTGATTGGTGAATCACTTCAGCTGTCCTTTAATCGA TATCTGCTGATTGCAACGCCTCCTTGTCTACTCGGCCTGGCACTGGTCTG GTGGGTTATTGTCAAAGTATATCGGGATCAATGGACGGTCGCACCTGGGG AGAGCAGTCCGTCTGAGGAGCCCCCTTTCAATCGCTGGCAGACTCTGAAG GGAACCGTGATTCTGTTGCTATTGGTTGTGTGCTTTATGTTTGCTCCCTG GCCGCGGGAACTGTTGGCACTTTGTGCGGCCGGCGTCCTCCTGCTCAGCC GTACTTTTTATTCCCGGAGCGTGATGGGACTGGTCGACTGGCCTTTGCTG GTTCTGTTTATCAGCCTGTTCATTGTCAATGAGGCATTCCAGCTGGCGGG AGGCATGGACTGGTTGATGTCTCATACCGCAGCTGCCGGGATTTCGCTTT CCGAACCGGTGCCGCTGTTTGTGGGAACGGCCGTGTTGAGTAATCTGGTT TCCAATGTCCCGGCAATCATGTTGCTGTTACCGGTCGTGGAAGGCAGCAG TATGGGGGCGTTACTGGCCCTGAGCAGTACTCTGGCGGGTAACTTCATCA TCGTAGGAAGT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85387:3..863+

>mRNA_M-pyrifera_M_contig85387.19904.1 ID=mRNA_M-pyrifera_M_contig85387.19904.1|Name=mRNA_M-pyrifera_M_contig85387.19904.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1722bp|location=Sequence derived from alignment at M-pyrifera_M_contig85387:3..863+ (Macrocystis pyrifera P11B4 male)
CAGCTGGGAGGCTTTTACGGATATGTGTTGCAGCGCGTGGTGCTGTATGA
CATGGCGCCCGCGACACTGCTGGCTGCAGTGATTGCTCTAACCGGGGCAC
TCAGTGCGATTCTGACGAATGATGTTGTCTGTCTGGCAGTTGCACCACTG
CTGTCTCGTCTGTGTCTCAACAAACGGCTCAACCCCGTCCCGTTTCTGCT
GGCCCTGGCTTGTGCAGCGAATATCGGCAGTGCAGCCACGTTGATTGGCA
ATCCACAGAACATCCTGATTGGTGAATCACTTCAGCTGTCCTTTAATCGA
TATCTGCTGATTGCAACGCCTCCTTGTCTACTCGGCCTGGCACTGGTCTG
GTGGGTTATTGTCAAAGTATATCGGGATCAATGGACGGTCGCACCTGGGG
AGAGCAGTCCGTCTGAGGAGCCCCCTTTCAATCGCTGGCAGACTCTGAAG
GGAACCGTGATTCTGTTGCTATTGGTTGTGTGCTTTATGTTTGCTCCCTG
GCCGCGGGAACTGTTGGCACTTTGTGCGGCCGGCGTCCTCCTGCTCAGCC
GTACTTTTTATTCCCGGAGCGTGATGGGACTGGTCGACTGGCCTTTGCTG
GTTCTGTTTATCAGCCTGTTCATTGTCAATGAGGCATTCCAGCTGGCGGG
AGGCATGGACTGGTTGATGTCTCATACCGCAGCTGCCGGGATTTCGCTTT
CCGAACCGGTGCCGCTGTTTGTGGGAACGGCCGTGTTGAGTAATCTGGTT
TCCAATGTCCCGGCAATCATGTTGCTGTTACCGGTCGTGGAAGGCAGCAG
TATGGGGGCGTTACTGGCCCTGAGCAGTACTCTGGCGGGTAACTTCATCA
TCGTAGGAAGTCAGCTGGGAGGCTTTTACGGATATGTGTTGCAGCGCGTG
GTGCTGTATGACATGGCGCCCGCGACACTGCTGGCTGCAGTGATTGCTCT
AACCGGGGCACTCAGTGCGATTCTGACGAATGATGTTGTCTGTCTGGCAG
TTGCACCACTGCTGTCTCGTCTGTGTCTCAACAAACGGCTCAACCCCGTC
CCGTTTCTGCTGGCCCTGGCTTGTGCAGCGAATATCGGCAGTGCAGCCAC
GTTGATTGGCAATCCACAGAACATCCTGATTGGTGAATCACTTCAGCTGT
CCTTTAATCGATATCTGCTGATTGCAACGCCTCCTTGTCTACTCGGCCTG
GCACTGGTCTGGTGGGTTATTGTCAAAGTATATCGGGATCAATGGACGGT
CGCACCTGGGGAGAGCAGTCCGTCTGAGGAGCCCCCTTTCAATCGCTGGC
AGACTCTGAAGGGAACCGTGATTCTGTTGCTATTGGTTGTGTGCTTTATG
TTTGCTCCCTGGCCGCGGGAACTGTTGGCACTTTGTGCGGCCGGCGTCCT
CCTGCTCAGCCGTACTTTTTATTCCCGGAGCGTGATGGGACTGGTCGACT
GGCCTTTGCTGGTTCTGTTTATCAGCCTGTTCATTGTCAATGAGGCATTC
CAGCTGGCGGGAGGCATGGACTGGTTGATGTCTCATACCGCAGCTGCCGG
GATTTCGCTTTCCGAACCGGTGCCGCTGTTTGTGGGAACGGCCGTGTTGA
GTAATCTGGTTTCCAATGTCCCGGCAATCATGTTGCTGTTACCGGTCGTG
GAAGGCAGCAGTATGGGGGCGTTACTGGCCCTGAGCAGTACTCTGGCGGG
TAACTTCATCATCGTAGGAAGT
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