mRNA_M-pyrifera_M_contig85369.19899.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85369.19899.1
Unique NamemRNA_M-pyrifera_M_contig85369.19899.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Match: A0A8J4PWL7_9MYCE (Uncharacterized protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PWL7_9MYCE)

HSP 1 Score: 120 bits (302), Expect = 2.690e-29
Identity = 64/125 (51.20%), Postives = 84/125 (67.20%), Query Frame = 1
Query:    1 FCGWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIAAYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQRRYANDHSCTRLSSLSLSLSGSFSRSLSRQS--KFQLGPV 369
            +CG+PDH APPL LL  I K I ++L  +  NVV++HCLAGKGRTGTVIA  LLY GLF  A DAM +FA +RS+NN+G+  PSQ RY    S   L+   ++ S  F +S++  +  KF LGP+
Sbjct:   91 WCGFPDHNAPPLGLLFKIVKTIHKWLEADPLNVVIVHCLAGKGRTGTVIACLLLYGGLFNNASDAMKYFAVKRSNNNYGITGPSQIRYTQYFSDIYLNGREVNPSPVFLKSITMNTIPKFFLGPL 215          
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Match: F0Z675_DICPU (Uncharacterized protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z675_DICPU)

HSP 1 Score: 119 bits (298), Expect = 9.270e-29
Identity = 64/125 (51.20%), Postives = 84/125 (67.20%), Query Frame = 1
Query:    1 FCGWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIAAYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQRRYANDHSCTRLSSLSLSLSGSFSRSLSRQS--KFQLGPV 369
            +CG+PDH APPL LL  I K I ++L K+  NVV++HC+AGKGRTGTVI+  L Y GLF +A DAM +FA +RS+NN+G+  PSQ RY    S   L    L+ S  F +S+S  +  KF LGP+
Sbjct:   91 WCGFPDHHAPPLGLLFKIVKTIYDWLGKDPLNVVIVHCMAGKGRTGTVISCLLQYGGLFDSASDAMRYFAVKRSNNNYGITGPSQIRYTQYFSELYLGGKDLNPSPVFLKSISMVTIPKFFLGPL 215          
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Match: F4PVW8_CAVFA (Pleckstrin domain-containing protein n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PVW8_CAVFA)

HSP 1 Score: 115 bits (289), Expect = 1.500e-27
Identity = 62/125 (49.60%), Postives = 82/125 (65.60%), Query Frame = 1
Query:    1 FCGWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIAAYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQRRYANDHSCTRLSSLSLSLSGSFSRSLSRQS--KFQLGPV 369
            +CG+PDH APPLALL  I   +  +L+++  NV ++HCLAGKGRTGTVIA  LLY GLF  + DAM +FA +RSSNN+GV  PSQ RY    S     + + +    F RS++  +  KF LGP+
Sbjct:   91 WCGFPDHHAPPLALLFKIVTSMYNWLSEDSQNVAIVHCLAGKGRTGTVIACLLLYGGLFDNSEDAMRYFAVKRSSNNFGVTGPSQIRYTQYFSNIYFGNQAPNQKALFLRSITMHTIPKFFLGPL 215          
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Match: A0A2P6NTR4_9EUKA (Uncharacterized protein n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6NTR4_9EUKA)

HSP 1 Score: 115 bits (288), Expect = 1.640e-27
Identity = 53/88 (60.23%), Postives = 63/88 (71.59%), Query Frame = 1
Query:    1 FCGWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIAAYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQRRY 264
            +CG+PDH APPL  L S  K I  +L  +  NVVV+HCLAGKGRTGT+IA YLLY GLF     A+ +FAA+RS+ NWGV  PSQ RY
Sbjct:   91 WCGFPDHHAPPLERLFSTIKSIHSWLHADKENVVVVHCLAGKGRTGTIIACYLLYSGLFNEVDQALAYFAAKRSTTNWGVTGPSQLRY 178          
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Match: Q54GT8_DICDI (Uncharacterized protein n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=Q54GT8_DICDI)

HSP 1 Score: 115 bits (287), Expect = 2.830e-27
Identity = 63/125 (50.40%), Postives = 80/125 (64.00%), Query Frame = 1
Query:    1 FCGWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIAAYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQRRYANDHSCTRLSSLSLSLSGSFSRSLSRQS--KFQLGPV 369
            +CG+PDH APPL LL  I   I  +L K+  NVVV+HC+AGKGRTGTVI+A L Y GLF  A DAM +FA +RS+NN+G+  PSQ RY    S        L+    F +S+S  +  KF LGP+
Sbjct:   91 WCGFPDHHAPPLGLLFKIVMTIYSWLEKDPMNVVVVHCMAGKGRTGTVISALLQYGGLFEGASDAMRYFAVKRSNNNYGITGPSQIRYTQYFSDIYFGGKELNPGPVFLKSISMVTLPKFFLGPL 215          
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Match: A0A6A5BYX2_NAEFO (Uncharacterized protein n=2 Tax=Naegleria TaxID=5761 RepID=A0A6A5BYX2_NAEFO)

HSP 1 Score: 112 bits (279), Expect = 5.170e-27
Identity = 47/86 (54.65%), Postives = 66/86 (76.74%), Query Frame = 1
Query:    7 GWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIAAYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQRRY 264
            G+PDH  PP+  L+ IC+E+D FL ++ +NVV +HCLAG+GRTGTVIA Y+ Y G+F +  +A+D+FA++RS+   GV  PSQRRY
Sbjct:  100 GFPDHHNPPVEYLIEICEEMDRFLKEDPNNVVSVHCLAGRGRTGTVIACYMTYSGMFESGTEALDYFASKRSTRERGVAQPSQRRY 185          
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Match: A0A8J6B0B8_9EUKA (C2 domain of PTEN tumor-suppressor protein n=1 Tax=Carpediemonas membranifera TaxID=201153 RepID=A0A8J6B0B8_9EUKA)

HSP 1 Score: 114 bits (284), Expect = 6.180e-27
Identity = 51/86 (59.30%), Postives = 65/86 (75.58%), Query Frame = 1
Query:    7 GWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIAAYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQRRY 264
            G+PDH +PPL+LL  ICK I  +L+ +  NVV++HCLAG+GRTGTVIA +L Y GLFT  +DA+ FFA +RS+   GV VPSQ RY
Sbjct:   54 GFPDHHSPPLSLLFKICKNIYSWLSADPDNVVIVHCLAGRGRTGTVIACFLAYAGLFTDPMDALTFFACKRSAKEQGVSVPSQVRY 139          
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Match: A0A151ZE75_9MYCE (Pleckstrin (PH) domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZE75_9MYCE)

HSP 1 Score: 114 bits (284), Expect = 7.110e-27
Identity = 59/125 (47.20%), Postives = 83/125 (66.40%), Query Frame = 1
Query:    1 FCGWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIAAYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQRRYANDHSCTRLSSLSLSLSGSFSRSLSRQS--KFQLGPV 369
            +CG+PDH APPL LL  I K I  +L ++  NVV++HC+AGKGRTGT+I+  LLY GLF    DAM +FA +RS+NN+G+  PSQ RYA   S   L    L+++  + +S++  +  KF  GP+
Sbjct:   91 WCGFPDHHAPPLGLLFKIVKTIYRWLEQDSMNVVIVHCMAGKGRTGTIISCLLLYGGLFDNDSDAMRYFAVKRSNNNYGITGPSQIRYARYFSDIYLGGKELNVAPIYLKSITMNTIPKFFNGPL 215          
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Match: D2VES5_NAEGR (Predicted protein (Fragment) n=1 Tax=Naegleria gruberi TaxID=5762 RepID=D2VES5_NAEGR)

HSP 1 Score: 107 bits (266), Expect = 9.200e-27
Identity = 46/83 (55.42%), Postives = 63/83 (75.90%), Query Frame = 1
Query:    7 GWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIAAYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQ 255
            G+PDH  PP+  L+ IC+ +D+FL +N +NVV IHCLAG+GRTGTVIA Y+ Y G+F +  +A+D+FA++RSS   GV  PSQ
Sbjct:  100 GFPDHHNPPVEFLIEICEAMDKFLKENPNNVVSIHCLAGRGRTGTVIACYMTYSGMFESGTEALDYFASQRSSRERGVAQPSQ 182          
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Match: UPI00064491FB (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI00064491FB)

HSP 1 Score: 110 bits (275), Expect = 1.160e-25
Identity = 50/88 (56.82%), Postives = 64/88 (72.73%), Query Frame = 1
Query:    1 FCGWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIAAYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQRRY 264
            +CG+PDH APPLAL+      I  +L ++  NV ++HCLAGKGRTGT+I+  LLY GLF  A DAM +FA +RSSNN+G+  PSQ RY
Sbjct:   91 WCGFPDHHAPPLALMFKTVISIYNYLQQDPLNVAIVHCLAGKGRTGTIISCLLLYAGLFDNAEDAMRYFAVKRSSNNYGITGPSQIRY 178          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85369.19899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8J4PWL7_9MYCE2.690e-2951.20Uncharacterized protein n=1 Tax=Polysphondylium vi... [more]
F0Z675_DICPU9.270e-2951.20Uncharacterized protein n=1 Tax=Dictyostelium purp... [more]
F4PVW8_CAVFA1.500e-2749.60Pleckstrin domain-containing protein n=1 Tax=Caven... [more]
A0A2P6NTR4_9EUKA1.640e-2760.23Uncharacterized protein n=1 Tax=Planoprotostelium ... [more]
Q54GT8_DICDI2.830e-2750.40Uncharacterized protein n=1 Tax=Dictyostelium disc... [more]
A0A6A5BYX2_NAEFO5.170e-2754.65Uncharacterized protein n=2 Tax=Naegleria TaxID=57... [more]
A0A8J6B0B8_9EUKA6.180e-2759.30C2 domain of PTEN tumor-suppressor protein n=1 Tax... [more]
A0A151ZE75_9MYCE7.110e-2747.20Pleckstrin (PH) domain-containing protein n=1 Tax=... [more]
D2VES5_NAEGR9.200e-2755.42Predicted protein (Fragment) n=1 Tax=Naegleria gru... [more]
UPI00064491FB1.160e-2556.82hypothetical protein n=1 Tax=Acytostelium subglobo... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85369contigM-pyrifera_M_contig85369:486..860 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score121.3
Seed ortholog evalue3.2e-25
Seed eggNOG ortholog5786.XP_003282885.1
Preferred nameTNS3
KEGG koko:K03258,ko:K18080
KEGG Pathwayko03013,ko04150,ko04151,ko05205,map03013,map04150,map04151,map05205
Hectar predicted targeting categoryother localisation
GOsGO:0001655,GO:0001822,GO:0003674,GO:0005102,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005912,GO:0005924,GO:0005925,GO:0006928,GO:0007275,GO:0008150,GO:0008152,GO:0008284,GO:0008285,GO:0009987,GO:0014823,GO:0014850,GO:0016477,GO:0019725,GO:0019899,GO:0019900,GO:0019901,GO:0030054,GO:0030055,GO:0030323,GO:0030324,GO:0032501,GO:0032502,GO:0032963,GO:0035264,GO:0035295,GO:0040007,GO:0040011,GO:0042127,GO:0042592,GO:0044424,GO:0044444,GO:0044464,GO:0048286,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048589,GO:0048731,GO:0048856,GO:0048870,GO:0048871,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051674,GO:0060541,GO:0065007,GO:0065008,GO:0070161,GO:0072001
EggNOG free text desc.C2 domain of PTEN tumour-suppressor protein
EggNOG OGs3X8RT@554915,COG2453@1,KOG0248@1,KOG0248@2759,KOG2283@2759
COG Functional cat.T
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03012,ko03019
Exons1
Model size375
Cds size375
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816762.5243607-CDS-M-pyrifera_M_contig85369:485..8601622816762.5243607-CDS-M-pyrifera_M_contig85369:485..860Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85369 486..860 -
1692278163.5430932-CDS-M-pyrifera_M_contig85369:485..8601692278163.5430932-CDS-M-pyrifera_M_contig85369:485..860Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85369 486..860 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85369.19899.1prot_M-pyrifera_M_contig85369.19899.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85369 486..860 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85369.19899.1

>prot_M-pyrifera_M_contig85369.19899.1 ID=prot_M-pyrifera_M_contig85369.19899.1|Name=mRNA_M-pyrifera_M_contig85369.19899.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=125bp
FCGWPDHTAPPLALLLSICKEIDEFLAKNHHNVVVIHCLAGKGRTGTVIA
AYLLYCGLFTAALDAMDFFAARRSSNNWGVCVPSQRRYANDHSCTRLSSL
SLSLSGSFSRSLSRQSKFQLGPVY*
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mRNA from alignment at M-pyrifera_M_contig85369:486..860-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85369.19899.1 ID=mRNA_M-pyrifera_M_contig85369.19899.1|Name=mRNA_M-pyrifera_M_contig85369.19899.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=375bp|location=Sequence derived from alignment at M-pyrifera_M_contig85369:486..860- (Macrocystis pyrifera P11B4 male)
TTCTGTGGCTGGCCTGACCACACTGCCCCTCCCCTTGCATTGCTGTTGTC CATCTGCAAGGAAATCGACGAATTCCTGGCCAAGAACCATCACAACGTTG TGGTTATCCACTGCTTGGCAGGAAAGGGCCGCACAGGCACTGTCATTGCG GCATATCTTCTCTATTGCGGCCTCTTCACTGCCGCTCTCGACGCCATGGA CTTCTTCGCAGCCAGGCGCTCTTCCAACAACTGGGGGGTCTGCGTACCCT CACAACGCCGGTATGCAAACGACCACTCTTGCACACGGCTGTCTTCTCTC TCTCTCTCTCTCTCTGGCTCTTTCTCTCGCTCTCTCTCTCGCCAGAGCAA ATTTCAGCTTGGGCCAGTGTACTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85369:486..860-

>mRNA_M-pyrifera_M_contig85369.19899.1 ID=mRNA_M-pyrifera_M_contig85369.19899.1|Name=mRNA_M-pyrifera_M_contig85369.19899.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=750bp|location=Sequence derived from alignment at M-pyrifera_M_contig85369:486..860- (Macrocystis pyrifera P11B4 male)
TTCTGTGGCTGGCCTGACCACACTGCCCCTCCCCTTGCATTGCTGTTGTC
CATCTGCAAGGAAATCGACGAATTCCTGGCCAAGAACCATCACAACGTTG
TGGTTATCCACTGCTTGGCAGGAAAGGGCCGCACAGGCACTGTCATTGCG
GCATATCTTCTCTATTGCGGCCTCTTCACTGCCGCTCTCGACGCCATGGA
CTTCTTCGCAGCCAGGCGCTCTTCCAACAACTGGGGGGTCTGCGTACCCT
CACAACGCCGGTATGCAAACGACCACTCTTGCACACGGCTGTCTTCTCTC
TCTCTCTCTCTCTCTGGCTCTTTCTCTCGCTCTCTCTCTCGCCAGAGCAA
ATTTCAGCTTGGGCCAGTGTACTGATTCTGTGGCTGGCCTGACCACACTG
CCCCTCCCCTTGCATTGCTGTTGTCCATCTGCAAGGAAATCGACGAATTC
CTGGCCAAGAACCATCACAACGTTGTGGTTATCCACTGCTTGGCAGGAAA
GGGCCGCACAGGCACTGTCATTGCGGCATATCTTCTCTATTGCGGCCTCT
TCACTGCCGCTCTCGACGCCATGGACTTCTTCGCAGCCAGGCGCTCTTCC
AACAACTGGGGGGTCTGCGTACCCTCACAACGCCGGTATGCAAACGACCA
CTCTTGCACACGGCTGTCTTCTCTCTCTCTCTCTCTCTCTGGCTCTTTCT
CTCGCTCTCTCTCTCGCCAGAGCAAATTTCAGCTTGGGCCAGTGTACTGA
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