prot_M-pyrifera_M_contig109494.1989.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig109494.1989.1
Unique Name	prot_M-pyrifera_M_contig109494.1989.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	88

Homology

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BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Match: A0A426XGH9_ENSVE (RING-type E3 ubiquitin transferase (Fragment) n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A426XGH9_ENSVE)

HSP 1 Score: 50.8 bits (120), Expect = 2.290e-5
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0

Query:    1 VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR 50
            + ++PV    G  +   SI  W+ATGN TCP+ RA +T+  L P H LRR
Sbjct:   27 LMRDPVTVCTGQTYDRASIESWVATGNTTCPVTRAPLTDFTLIPNHNLRR 76

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BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Match: A0A444EPS3_ENSVE (U-box domain-containing protein n=1 Tax=Ensete ventricosum TaxID=4639 RepID=A0A444EPS3_ENSVE)

HSP 1 Score: 50.8 bits (120), Expect = 2.350e-5
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0

Query:    1 VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR 50
            + ++PV    G  +   SI  W+ATGN TCP+ RA +T+  L P H LRR
Sbjct:   27 LMRDPVTVCTGQTYDRASIESWVATGNTTCPVTRAPLTDFTLIPNHNLRR 76

[Close]

BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Match: A0A445B6K5_ARAHY (RING-type E3 ubiquitin transferase n=4 Tax=Arachis TaxID=3817 RepID=A0A445B6K5_ARAHY)

HSP 1 Score: 50.8 bits (120), Expect = 2.460e-5
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0

Query:    1 VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR 50
            + ++PV    G  +   SI  W+ATGN TCP+ RA +T+  L P H LRR
Sbjct:   26 LMRDPVTVCTGQTYDRPSIESWVATGNTTCPVTRATLTDFTLIPNHTLRR 75

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BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Match: UPI00125E0A96 (U-box domain-containing protein 26-like n=1 Tax=Ipomoea triloba TaxID=35885 RepID=UPI00125E0A96)

HSP 1 Score: 50.8 bits (120), Expect = 2.460e-5
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0

Query:    1 VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR 50
            + ++PV    G  +   SI  W+ATGN TCP+ RA +T+  L P H LRR
Sbjct:   27 LMRDPVTVCTGQTYDRASIESWVATGNTTCPVTRATLTDFTLIPNHTLRR 76

[Close]

BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Match: A0A804JL31_MUSAM (RING-type E3 ubiquitin transferase n=3 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804JL31_MUSAM)

HSP 1 Score: 50.8 bits (120), Expect = 2.460e-5
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0

Query:    1 VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR 50
            + ++PV    G  +   SI  W+ATGN TCP+ RA +T+  L P H LRR
Sbjct:   27 LMRDPVTMCTGQTYDRASIESWMATGNTTCPVTRAPLTDFTLIPNHNLRR 76

[Close]

BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Match: UPI00053FB4C9 (U-box domain-containing protein 26 n=1 Tax=Beta vulgaris subsp. vulgaris TaxID=3555 RepID=UPI00053FB4C9)

HSP 1 Score: 50.8 bits (120), Expect = 2.470e-5
Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 0

Query:    1 VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR 50
            + ++PV    G  +  +SI  W+ATGN TCP+ RA +++  L P H LRR
Sbjct:   34 LMRDPVTVCTGQTYDRQSIESWVATGNTTCPVTRATLSDFSLIPNHTLRR 83

[Close]

BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Match: A0A443NU94_9MAGN (RING-type E3 ubiquitin transferase n=1 Tax=Cinnamomum micranthum f. kanehirae TaxID=337451 RepID=A0A443NU94_9MAGN)

HSP 1 Score: 50.4 bits (119), Expect = 3.360e-5
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0

Query:    1 VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR 50
            + ++PV    G  +   SI  W+ATGN TCP+ RA +T+  L P H LRR
Sbjct:   28 LMRDPVTVSTGQTYDRTSIESWIATGNTTCPVTRAILTDFTLIPNHTLRR 77

[Close]

BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Match: A0A833WGA6_JUGRE (RING-type E3 ubiquitin transferase n=5 Tax=Juglandaceae TaxID=16714 RepID=A0A833WGA6_JUGRE)

HSP 1 Score: 50.4 bits (119), Expect = 3.400e-5
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0

Query:    1 VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR 50
            + ++PV    G  +   SI  W+ATGN TCP+ RA +T+  L P H LRR
Sbjct:   79 LMRDPVTVRTGQTYDRSSIESWVATGNTTCPVTRAPLTDFTLIPNHTLRR 128

[Close]

BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Match: UPI000900CD49 (U-box domain-containing protein 26-like n=1 Tax=Ipomoea nil TaxID=35883 RepID=UPI000900CD49)

HSP 1 Score: 50.4 bits (119), Expect = 3.440e-5
Identity = 22/50 (44.00%), Postives = 30/50 (60.00%), Query Frame = 0

Query:    1 VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR 50
            + ++PV    G  +   SI  W+ATGN TCP+ RA +T+  L P H LRR
Sbjct:  153 LMRDPVTVCTGQTYDRASIESWVATGNTTCPVTRAPLTDFTLIPNHTLRR 202

[Close]

BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Match: UPI000B76E8F9 (U-box domain-containing protein 26-like n=1 Tax=Hevea brasiliensis TaxID=3981 RepID=UPI000B76E8F9)

HSP 1 Score: 50.1 bits (118), Expect = 4.590e-5
Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 0

Query:    1 VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR 50
            + ++PV    G  +   SI  W++TGN+TCP+ RA +T+  L P H LRR
Sbjct:   26 LMRDPVTVSTGQTYDRSSIESWVSTGNSTCPVTRAPLTDFSLIPNHTLRR 75

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig109494.1989.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 22


Match Name	E-value	Identity	Description
A0A426XGH9_ENSVE	2.290e-5	44.00	RING-type E3 ubiquitin transferase (Fragment) n=1 ...	[more]
A0A444EPS3_ENSVE	2.350e-5	44.00	U-box domain-containing protein n=1 Tax=Ensete ven...	[more]
A0A445B6K5_ARAHY	2.460e-5	44.00	RING-type E3 ubiquitin transferase n=4 Tax=Arachis...	[more]
UPI00125E0A96	2.460e-5	44.00	U-box domain-containing protein 26-like n=1 Tax=Ip...	[more]
A0A804JL31_MUSAM	2.460e-5	44.00	RING-type E3 ubiquitin transferase n=3 Tax=Musa ac...	[more]
UPI00053FB4C9	2.470e-5	42.00	U-box domain-containing protein 26 n=1 Tax=Beta vu...	[more]
A0A443NU94_9MAGN	3.360e-5	44.00	RING-type E3 ubiquitin transferase n=1 Tax=Cinnamo...	[more]
A0A833WGA6_JUGRE	3.400e-5	44.00	RING-type E3 ubiquitin transferase n=5 Tax=Jugland...	[more]
UPI000900CD49	3.440e-5	44.00	U-box domain-containing protein 26-like n=1 Tax=Ip...	[more]
UPI000B76E8F9	4.590e-5	42.00	U-box domain-containing protein 26-like n=1 Tax=He...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001841	Zinc finger, RING-type	PFAM	PF13639	zf-RING_2	coord: 4..34 e-value: 7.8E-7 score: 29.3
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10		coord: 1..53 e-value: 1.4E-13 score: 52.4
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 3..51

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig109494	contig	M-pyrifera_M_contig109494:132..395 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig109494.1989.1	mRNA_M-pyrifera_M_contig109494.1989.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig109494 132..395 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig109494.1989.1 ID=prot_M-pyrifera_M_contig109494.1989.1|Name=mRNA_M-pyrifera_M_contig109494.1989.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=88bp
VQKEPVETLCGHVFSAESIMDWLATGNNTCPLCRAAVTNSDLKPAHELRR
KLGLDDVDTSDEEFRQLINVVNAASSLDGDEEAYDMGL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001841	Znf_RING
IPR013083	Znf_RING/FYVE/PHD