prot_M-pyrifera_M_contig8534.19891.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8534.19891.1
Unique Nameprot_M-pyrifera_M_contig8534.19891.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length245
Homology
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BLAST of mRNA_M-pyrifera_M_contig8534.19891.1 vs. uniprot
Match: D7G015_ECTSI (Rhodanese domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G015_ECTSI)

HSP 1 Score: 191 bits (484), Expect = 1.960e-57
Identity = 99/154 (64.29%), Postives = 114/154 (74.03%), Query Frame = 0 
Query:   90 GEVSPGYSDVTVREAVEWTMSRDSEFTYIDIRSAEEHGKLATVRGALCIPAFERATPRAPPXXXXXXXXXXXXXXXXXXXXYEADYDYEELEWKILPDFVERLKEQFDLSAKLLIGCKTKRSAEACRLLVDAGFTEIYNVESQIFMRTRAPQVW 243
            GE   GY+DVTVREAVEWTMSRDSEF+YIDIRSAEEH KLATVRGALCIPAF+   P A                      Y   Y++EE ++ + PDFV+ +K +FDL AKLLIGCKT RSA+AC+LLV+AGFTEIYNVESQIFMRTRAP+VW
Sbjct:   65 GEEEKGYTDVTVREAVEWTMSRDSEFSYIDIRSAEEHEKLATVRGALCIPAFDLVMPEA------EEQGEGLDDQDGDDTGYAPAYNFEESDYTVKPDFVDTMKARFDLDAKLLIGCKTYRSAKACQLLVEAGFTEIYNVESQIFMRTRAPEVW 212
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8534.19891.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G015_ECTSI1.960e-5764.29Rhodanese domain-containing protein n=2 Tax=Ectoca... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036873Rhodanese-like domain superfamilyGENE3D3.40.250.10coord: 96..239
e-value: 1.0E-13
score: 53.2
IPR036873Rhodanese-like domain superfamilySUPERFAMILY52821Rhodanese/Cell cycle control phosphatasecoord: 95..230
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..14
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 15..244
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..16
score: 0.554
IPR001763Rhodanese-like domainPROSITEPS50206RHODANESE_3coord: 111..232
score: 8.993

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8534contigM-pyrifera_M_contig8534:1952..8166 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8534.19891.1mRNA_M-pyrifera_M_contig8534.19891.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8534 1935..8191 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8534.19891.1 ID=prot_M-pyrifera_M_contig8534.19891.1|Name=mRNA_M-pyrifera_M_contig8534.19891.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=245bp
MRVGGFVLLLGAMAEAFVPRPSRILQRSWLLEATGKHNNLKPFSRPISSL
RPAVSGRRGWVGSFRAPRMWEGDGEAQGLEEEEGEYEKEGEVSPGYSDVT
VREAVEWTMSRDSEFTYIDIRSAEEHGKLATVRGALCIPAFERATPRAPP
PPGPEGTGDGSDVDSEPMPVYEADYDYEELEWKILPDFVERLKEQFDLSA
KLLIGCKTKRSAEACRLLVDAGFTEIYNVESQIFMRTRAPQVWE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036873Rhodanese-like_dom_sf
IPR001763Rhodanese-like_dom