mRNA_M-pyrifera_M_contig85310.19888.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Match: A0A7C1JU90_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C1JU90_9BACT) HSP 1 Score: 298 bits (764), Expect = 2.030e-96 Identity = 155/244 (63.52%), Postives = 188/244 (77.05%), Query Frame = 1 Query: 31 RIVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAIHRHSTRAAAPFVPVNLAEVSIPLAESELFGHTRGAFTGAETDRQGLLEQAHGGTVFLDEVADIPLPLQVKLLRALELGEFRPVGSTRSIHADFRIISASNTDLKQAVAKGRFREDLYFRLAAFEIVLPPLRERREDIPALAQHFLALMQSNSPSPHARFSSKAMAELQERQWRGNVRELRRAIEHALVHARNGEVLPEHLP 762 R+VG SP +Q VFK+IAL A + V + GE+GTGKELVARAIHR+S RA+ PFV VN+A +S LAESELFGH RGAFTGA+ R+GLLEQA GGT+FLDEVADIP+P+QVKLLRALE GE PVGS++ + D RIISA++ +L + VA+GRFR DLY+RL FEI +PPLR RREDIP L ++FL L+ S + + S +AMAEL R W GNVRELR AIEHAL+ AR G + PEHLP Sbjct: 115 RMVGRSPAMQEVFKRIALVAPVDACVHIRGESGTGKELVARAIHRYSRRASGPFVAVNVASLSPTLAESELFGHVRGAFTGADQARKGLLEQASGGTIFLDEVADIPIPVQVKLLRALEHGEVLPVGSSQPVSVDLRIISATHQNLAELVAEGRFRHDLYYRLVTFEIEIPPLRHRREDIPELTEYFLDLLASKNSAVRPSVSPQAMAELSRRPWYGNVRELRNAIEHALIMARGGSINPEHLP 358
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Match: A0A847GQ87_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Candidatus Anammoximicrobium sp. TaxID=2699742 RepID=A0A847GQ87_9BACT) HSP 1 Score: 293 bits (750), Expect = 5.920e-94 Identity = 154/246 (62.60%), Postives = 189/246 (76.83%), Query Frame = 1 Query: 34 IVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAIHRHSTRAAAPFVPVNLAEVSIPLAESELFGHTRGAFTGAETDRQGLLEQAHGGTVFLDEVADIPLPLQVKLLRALELGEFRPVGSTRSIHADFRIISASNTDLKQAVAKGRFREDLYFRLAAFEIVLPPLRERREDIPALAQHFLALMQSNSPSPHARFSSKAMAELQERQWRGNVRELRRAIEHALVHARNGEVLPEHLPAET 771 +VG SPV+Q VFK+IALAA SE SV + GE+G+GKEL ARAIHR+S RA PFV VNLA +S LAESELFGH RGAFTGAE + GLL QAHGGT+FLDEVADIPLP QVKLLRALE GEF PVG+ + + +DFR++SA++ +L + G+FR DLYFRLAAF I LPPLR+R +DI LA++FL+L + SP FS+ + ELQ R W GNVREL+ A+EHA++ AR+G + PEHLP T Sbjct: 135 LVGRSPVMQEVFKRIALAASSEASVLLCGESGSGKELTARAIHRYSRRAEGPFVAVNLASLSSSLAESELFGHARGAFTGAEREHTGLLLQAHGGTLFLDEVADIPLPAQVKLLRALEHGEFVPVGAHQPVKSDFRVVSATHQELLAKIRDGQFRHDLYFRLAAFRIDLPPLRQRPDDIRELAEYFLSLAEQRRESPPG-FSADTLEELQRRPWYGNVRELKNAVEHAVIVARSGSIEPEHLPPPT 379
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Match: A0A7C7QYI1_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7QYI1_9PLAN) HSP 1 Score: 289 bits (739), Expect = 2.320e-92 Identity = 158/248 (63.71%), Postives = 189/248 (76.21%), Query Frame = 1 Query: 22 PRERIVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAIHRHSTRAAAPFVPVNLAEVSIPLAESELFGHTRGAFTGAETDRQGLLEQAHGGTVFLDEVADIPLPLQVKLLRALELGEFRPVGSTRSIHADFRIISASNTDLKQAVAKGRFREDLYFRLAAFEIVLPPLRERREDIPALAQHFL-ALMQSNSPSPHARFSSKAMAELQERQWRGNVRELRRAIEHALVHARNGEVLPEHLP 762 P +VG+SP +QR FK+IALAA S+ V V+GE+GTGKEL ARAIHR+S RA PFV VN+A +S + ESELFGH RGAFTGAE R GLL QAHGGT+FLDEVADIPLP+QVKLLRALE GE PVG+ R+ DFRI++A++ L++ V +G FR+DLYFRL+AF I LPPLRERREDI +LA HFL A + P A S +A+AEL+ R W GNVRELR AIEHA + AR G V+PEHLP Sbjct: 132 PMGGLVGASPAMQRAFKRIALAAASDACVLVTGESGTGKELTARAIHRYSRRAKGPFVAVNVAALSPTVVESELFGHLRGAFTGAEQTRPGLLVQAHGGTLFLDEVADIPLPVQVKLLRALEHGEVLPVGANRAAPTDFRIVAATHQPLEKRVREGSFRQDLYFRLSAFRIDLPPLRERREDIRSLAHHFLHASAPAEGPDCLA-ISEEAIAELERRPWYGNVRELRNAIEHARIVARGGIVMPEHLP 378
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Match: A0A517YJP3_9BACT (Nitrogen assimilation regulatory protein n=1 Tax=Anatilimnocola aggregata TaxID=2528021 RepID=A0A517YJP3_9BACT) HSP 1 Score: 289 bits (739), Expect = 2.460e-92 Identity = 153/244 (62.70%), Postives = 184/244 (75.41%), Query Frame = 1 Query: 34 IVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAIHRHSTRAAAPFVPVNLAEVSIPLAESELFGHTRGAFTGAETDRQGLLEQAHGGTVFLDEVADIPLPLQVKLLRALELGEFRPVGSTRSIHADFRIISASNTDLKQAVAKGRFREDLYFRLAAFEIVLPPLRERREDIPALAQHFLA-LMQSNSPSPHARFSSKAMAELQERQWRGNVRELRRAIEHALVHARNGEVLPEHLP 762 ++G +PV+Q +FK+IAL + SE V +SGE+GTGKELVARAIH++S RA+APFV VN+A +S LAESELFGH RGAFTGAE R GLL A GGT+FLDEVADIPLP+QVKLLRALE GE PVGS R+ +FR+ISA++ DL V +G FR DLYFRL F++ LPPLRER+ED+P L HFL L SP F+S A+AE Q R W GNVRELR A+EHAL+ AR G +LPEH P Sbjct: 138 LIGKTPVMQEIFKRIALVSASEACVFISGESGTGKELVARAIHQYSKRASAPFVAVNVAALSPSLAESELFGHVRGAFTGAEQSRAGLLADADGGTLFLDEVADIPLPVQVKLLRALEHGEVMPVGSGRTTRTNFRLISATHQDLLAKVREGTFRHDLYFRLCTFQVPLPPLRERKEDLPLLVNHFLQQLAPGKSPGS---FTSVALAEAQRRPWHGNVRELRNAVEHALIVAREGPILPEHWP 378
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Match: A0A7Y5SPP5_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Pirellulales bacterium TaxID=2715253 RepID=A0A7Y5SPP5_9BACT) HSP 1 Score: 288 bits (738), Expect = 3.010e-92 Identity = 153/245 (62.45%), Postives = 187/245 (76.33%), Query Frame = 1 Query: 34 IVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAIHRHSTRAAAPFVPVNLAEVSIPLAESELFGHTRGAFTGAETDRQGLLEQAHGGTVFLDEVADIPLPLQVKLLRALELGEFRPVGSTRSIHADFRIISASNTDLKQAVAKGRFREDLYFRLAAFEIVLPPLRERREDIPALAQHFLALMQSNSPS-PHARFSSKAMAELQERQWRGNVRELRRAIEHALVHARNGEVLPEHLPA 765 IVGSSP +Q VFK+IAL A SE V + GE+GTGKELVARAIHR+S RA PF+ VN+A +S LAESELFGH RGAFTGA+ R GLLE+A+GGT+FLDEVADIPL LQVKLLRALE E PVG T+ + DFRI+SA++ +L + VA GRFR DLYFRL AF+I +PPLR R EDI LA+HFLA S + PH + +AMA+L++R W GNVRELR A++HA++ A G + PEHLP+ Sbjct: 136 IVGSSPAMQEVFKRIALVAPSEACVHICGESGTGKELVARAIHRYSRRATGPFIAVNIASLSQSLAESELFGHVRGAFTGADQPRAGLLERANGGTIFLDEVADIPLSLQVKLLRALEHREVLPVGGTQPVQVDFRIVSATHRNLAECVADGRFRHDLYFRLLAFQIEIPPLRRRPEDIGPLAEHFLARSASTGGTRPH--LTPEAMADLRKRPWYGNVRELRNALDHAMILAPRGRIAPEHLPS 378
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Match: A0A356EN69_9PLAN (Sigma-54-dependent Fis family transcriptional regulator n=2 Tax=Planctomycetia TaxID=203683 RepID=A0A356EN69_9PLAN) HSP 1 Score: 287 bits (734), Expect = 1.470e-91 Identity = 147/245 (60.00%), Postives = 186/245 (75.92%), Query Frame = 1 Query: 28 ERIVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAIHRHSTRAAAPFVPVNLAEVSIPLAESELFGHTRGAFTGAETDRQGLLEQAHGGTVFLDEVADIPLPLQVKLLRALELGEFRPVGSTRSIHADFRIISASNTDLKQAVAKGRFREDLYFRLAAFEIVLPPLRERREDIPALAQHFLALMQSNSPSPHARFSSKAMAELQERQWRGNVRELRRAIEHALVHARNGEVLPEHLP 762 +++VG+S V++ VFK+IAL A S+ V + E+GTGKEL ARAIHR+S R+A PFV +N+A +S LAESELFGH +G+FTGA+ R+GLLEQA GGT+FLDEVADIP P+QVKLLRALE E PVG+ R + +DFRIISA++ +L VA+GRFR DLYFRL FEI +PPLRE +DI LA+HFL L+ + P S+ AMAEL+ R W GN+RELR A+EHA+V AR G + PEHLP Sbjct: 136 DQMVGTSAVMREVFKRIALVAASDACVHLRAESGTGKELAARAIHRYSRRSAGPFVAINVASLSPTLAESELFGHAKGSFTGADASRKGLLEQADGGTIFLDEVADIPAPIQVKLLRALEHREMLPVGANRPVRSDFRIISATHQNLANLVAEGRFRHDLYFRLITFEIEIPPLREHPDDIGPLAKHFLRLLAATRNEPSPALSAAAMAELRRRPWHGNIRELRNAVEHAVVLARGGAIGPEHLP 380
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Match: A0A518AGI7_9BACT (Transcriptional regulatory protein ZraR n=1 Tax=Aeoliella mucimassa TaxID=2527972 RepID=A0A518AGI7_9BACT) HSP 1 Score: 286 bits (733), Expect = 1.800e-91 Identity = 153/247 (61.94%), Postives = 182/247 (73.68%), Query Frame = 1 Query: 28 ERIVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAIHRHSTRAAAPFVPVNLAEVSIPLAESELFGHTRGAFTGAETDRQGLLEQAHGGTVFLDEVADIPLPLQVKLLRALELGEFRPVGSTRSIHADFRIISASNTDLKQAVAKGRFREDLYFRLAAFEIVLPPLRERREDIPALAQHFLALMQSNSPSPHA--RFSSKAMAELQERQWRGNVRELRRAIEHALVHARNGEVLPEHLP 762 ++++G +P++Q +FKQIAL A ++TSV + GE+G GKE+VARAIHRHS + PFV VN+A +S LAESELFGHT GAFTGA R GLL QA+GGT+FLDEVADIPLPLQVKLLRA+E GE PVG+ + + FRII AS+ LKQ V G FR DLYFRLAAFEI +PPLRER DIP LAQHF A PHA FS A+ EL+ R W GNVRELR A+EHA V R+G + PEHLP Sbjct: 136 DKLIGQTPIMQELFKQIALVAATDTSVVLQGESGVGKEVVARAIHRHSIASDQPFVAVNIAALSPSLAESELFGHTAGAFTGASRARDGLLVQANGGTLFLDEVADIPLPLQVKLLRAVEEGEVLPVGADQPVQTRFRIIGASHQSLKQCVQSGTFRHDLYFRLAAFEITIPPLRERANDIPLLAQHFAARR------PHAPQTFSDPAIVELRRRPWHGNVRELRNAVEHAQVVCRSGVITPEHLP 376
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Match: A0A5C9CMP3_9BACT (Two-component system NtrC family nitrogen regulation response regulator GlnG n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A5C9CMP3_9BACT) HSP 1 Score: 286 bits (731), Expect = 3.610e-91 Identity = 151/246 (61.38%), Postives = 183/246 (74.39%), Query Frame = 1 Query: 25 RERIVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAIHRHSTRAAAPFVPVNLAEVSIPLAESELFGHTRGAFTGAETDRQGLLEQAHGGTVFLDEVADIPLPLQVKLLRALELGEFRPVGSTRSIHADFRIISASNTDLKQAVAKGRFREDLYFRLAAFEIVLPPLRERREDIPALAQHFLALMQSNSPSPHARFSSKAMAELQERQWRGNVRELRRAIEHALVHARNGEVLPEHLP 762 + +IVG SPV+Q VFKQIAL A S+ V VSGE+GTGKELVARAIHR+S R+ PFVPV++A +S LAESELFGH RGAFTGA+ R GLLEQA GGTVFLDEVADIPL LQ+KLLRALE GE PVGS + DFR++SA++ DL++ VA G FR DL+FRL F+I LPPLRER DI L +HF+ + + + P S +A AEL R W GNVRELR AIEHA++ AR G++ P+ P Sbjct: 135 QNQIVGHSPVLQDVFKQIALVAASDACVLVSGESGTGKELVARAIHRYSRRSDGPFVPVHVAALSPMLAESELFGHVRGAFTGADAPRTGLLEQAQGGTVFLDEVADIPLALQIKLLRALEHGEIVPVGSDKPRTIDFRLLSATHQDLREKVAAGSFRHDLFFRLVTFQIELPPLRERGPDILELTEHFIGNLTAKNQLPRPTLSKRAEAELNRRPWHGNVRELRNAIEHAVIMARGGQIEPDQFP 380
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Match: A0A3M1RIV7_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3M1RIV7_9BACT) HSP 1 Score: 285 bits (728), Expect = 1.790e-90 Identity = 150/254 (59.06%), Postives = 184/254 (72.44%), Query Frame = 1 Query: 1 DDMGDGNPRERIVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAIHRHSTRAAAPFVPVNLAEVSIPLAESELFGHTRGAFTGAETDRQGLLEQAHGGTVFLDEVADIPLPLQVKLLRALELGEFRPVGSTRSIHADFRIISASNTDLKQAVAKGRFREDLYFRLAAFEIVLPPLRERREDIPALAQHFLALMQSNSPSPHARFSSKAMAELQERQWRGNVRELRRAIEHALVHARNGEVLPEHLP 762 D G + IVG+SP +Q VFK+IALAA V + GETGTGKELVARAIHR S RA PFVPVN+A +S LAESELFGH RGAFTGAE+ R+GLL+QA GGT+F+DEVA+IP +QVKLLR+L+ GE VG+ R + DFRIISA++ DL + V +G FR DLYFRL FEI LPPLRERR+DIP LA+HFLA + + P + + + E++ R W GNVRELR +E A + AR G +LPEHLP Sbjct: 138 DTRGKADDEYVIVGNSPAMQEVFKKIALAAAGTACVHLKGETGTGKELVARAIHRFSRRADGPFVPVNIASLSPTLAESELFGHERGAFTGAESRRRGLLQQADGGTLFIDEVAEIPEAIQVKLLRSLDYGEVLAVGAERPVRCDFRIISATHQDLAELVRQGTFRRDLYFRLVTFEIELPPLRERRDDIPLLAEHFLARFAARNGRPVPTLAPETLEEMERRPWWGNVRELRNCLESAAMVARGGRILPEHLP 391
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Match: A0A4P5XU50_9BACT (Sigma-54-dependent Fis family transcriptional regulator n=1 Tax=Planctomycetia bacterium TaxID=2052181 RepID=A0A4P5XU50_9BACT) HSP 1 Score: 284 bits (726), Expect = 2.040e-90 Identity = 150/246 (60.98%), Postives = 181/246 (73.58%), Query Frame = 1 Query: 25 RERIVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAIHRHSTRAAAPFVPVNLAEVSIPLAESELFGHTRGAFTGAETDRQGLLEQAHGGTVFLDEVADIPLPLQVKLLRALELGEFRPVGSTRSIHADFRIISASNTDLKQAVAKGRFREDLYFRLAAFEIVLPPLRERREDIPALAQHFLALMQSNSPSPHARFSSKAMAELQERQWRGNVRELRRAIEHALVHARNGEVLPEHLP 762 +++IVG SP +Q VFKQIAL A SE V VSGE+GTGKELVARAIHR S R+A PFVPV++A +S LAESELFGH RGAFTGA+ R GLLEQA GGTVFLDEVADIPLPLQ+KLLRALE GE PVGS + DFR++SA++ L + VA G FR DL+FRL F+I LPPLRER D+ L +HF+ + + + P S +A AEL R W GNVRELR IEHA++ AR G++ P+ P Sbjct: 135 QDQIVGHSPALQDVFKQIALVAGSEACVLVSGESGTGKELVARAIHRFSRRSAGPFVPVHVAALSPMLAESELFGHVRGAFTGADAPRTGLLEQAQGGTVFLDEVADIPLPLQIKLLRALEHGEIVPVGSDKPRTIDFRLVSATHQKLSEKVATGTFRHDLFFRLVTFQIELPPLRERGADLLELTEHFIGNLTAKNQLPRPTLSKRAEAELARRPWHGNVRELRNTIEHAVIIARGGQIEPDQFP 380 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85310.19888.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85310.19888.1 >prot_M-pyrifera_M_contig85310.19888.1 ID=prot_M-pyrifera_M_contig85310.19888.1|Name=mRNA_M-pyrifera_M_contig85310.19888.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp MGDGNPRERIVGSSPVIQRVFKQIALAAQSETSVQVSGETGTGKELVARAback to top mRNA from alignment at M-pyrifera_M_contig85310:20..796+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85310.19888.1 ID=mRNA_M-pyrifera_M_contig85310.19888.1|Name=mRNA_M-pyrifera_M_contig85310.19888.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=777bp|location=Sequence derived from alignment at M-pyrifera_M_contig85310:20..796+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85310:20..796+ >mRNA_M-pyrifera_M_contig85310.19888.1 ID=mRNA_M-pyrifera_M_contig85310.19888.1|Name=mRNA_M-pyrifera_M_contig85310.19888.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1542bp|location=Sequence derived from alignment at M-pyrifera_M_contig85310:20..796+ (Macrocystis pyrifera P11B4 male)back to top |