prot_M-pyrifera_M_contig85249.19874.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig85249.19874.1
Unique Nameprot_M-pyrifera_M_contig85249.19874.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length139
Homology
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Match: A0A7S0PGU6_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PGU6_CAFRO)

HSP 1 Score: 183 bits (464), Expect = 3.390e-55
Identity = 82/138 (59.42%), Postives = 102/138 (73.91%), Query Frame = 0
Query:    2 QFEERLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGLVVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARIVYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSYPY 139
            ++ ER YQ  +   ALF NTL+SLPTGLGKTFIAAVVMHN+ RWFP G VVFMAPTRPLV+QQV+ACH++   P E  A +QG+ +   R+ YW    ++YCTP +L NDLE +  DARRIV +V+DEAH+ TG Y Y
Sbjct:   39 EYPEREYQLAIAGRALFENTLVSLPTGLGKTFIAAVVMHNYRRWFPSGKVVFMAPTRPLVAQQVEACHKIVGIPAEDTAQMQGSVAASLREGYWRERAVIYCTPQMLQNDLEARRVDARRIVLLVLDEAHRATGKYAY 176          
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Match: A0A418AL25_9STRA (Helicase ATP-binding domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418AL25_9STRA)

HSP 1 Score: 179 bits (453), Expect = 3.220e-54
Identity = 76/134 (56.72%), Postives = 100/134 (74.63%), Query Frame = 0
Query:    6 RLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGLVVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARIVYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSYPY 139
            R YQ+++   AL++NTL+ LPTGLGKT IAAVVM+NF+RWFP G +VFMAPT+PLVSQQ+QACH V   P+  +A LQG  +P KRK  W + R+ +CTP  + ND+E+   D R  VC+V+DEAH+ TG+Y Y
Sbjct:   40 RAYQQSISRAALYQNTLVCLPTGLGKTLIAAVVMYNFHRWFPRGKIVFMAPTKPLVSQQIQACHDVMPIPQHDMAELQGNVAPSKRKALWATKRVFFCTPQSMQNDIERGNCDVRSFVCVVVDEAHRATGNYAY 173          
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Match: B8CFY5_THAPS (Atp-dependent RNA helicase (Fragment) n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CFY5_THAPS)

HSP 1 Score: 177 bits (448), Expect = 1.590e-53
Identity = 75/137 (54.74%), Postives = 102/137 (74.45%), Query Frame = 0
Query:    1 DQFEERLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGLVVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARIVYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSY 137
            +++ ER YQ  + + A+  NTL+SLPTGLGKT IAAVVM+N+YRWFP G VVF APTRPLV+QQ+QAC+++   PE H A + G + P+ R+  WNS R+ +CTPH L  D+E    DA+ IVC+V+DEAH+ TG++
Sbjct:    7 EKYPERSYQLQMSQTAIMANTLVSLPTGLGKTLIAAVVMYNYYRWFPTGKVVFCAPTRPLVTQQIQACYKIMGIPELHTAEISGRSKPESRENMWNSKRVFFCTPHTLVKDIEGGRCDAKSIVCVVMDEAHRATGNH 143          
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Match: A0A3Q2P0J9_FUNHE (Helicase ATP-binding domain-containing protein n=1 Tax=Fundulus heteroclitus TaxID=8078 RepID=A0A3Q2P0J9_FUNHE)

HSP 1 Score: 179 bits (455), Expect = 1.250e-52
Identity = 77/134 (57.46%), Postives = 106/134 (79.10%), Query Frame = 0
Query:    6 RLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGLVVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARIVYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSYPY 139
            R YQ  + E ALF+NTL+ LPTGLGKTFIAAVVM+NFYRW+P G +VFMAPT+PLV+QQ++AC++V   P+EH+A L G+T+ K+R+E W + R+ + TP ++ NDL + T  AR+I C+VIDEAHK +G++ Y
Sbjct:  159 REYQLKISEAALFQNTLVCLPTGLGKTFIAAVVMYNFYRWYPAGKIVFMAPTKPLVAQQIEACYKVMGIPQEHMAELTGSTAAKQRQEVWRAKRVFFLTPQVMVNDLSRDTCPARQIKCVVIDEAHKASGNHAY 292          
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Match: A0A834F547_ORYME (Fanconi anemia group M protein n=1 Tax=Oryzias melastigma TaxID=30732 RepID=A0A834F547_ORYME)

HSP 1 Score: 177 bits (448), Expect = 1.850e-52
Identity = 75/134 (55.97%), Postives = 104/134 (77.61%), Query Frame = 0
Query:    6 RLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGLVVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARIVYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSYPY 139
            R YQ  + E ALF+NTL+ LPTGLGKTFIAAVVM+NFYRW+P G +VFMAPT+PLV+QQ++AC++V   P+ H+A L G+T+ K+R+E W S R+ + TP ++ NDL + T  A+++ C+VIDEAHK  G++ Y
Sbjct:   58 RNYQLKISEAALFQNTLVCLPTGLGKTFIAAVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACYKVMGIPQTHMAELTGSTAAKQRQEVWKSKRVFFLTPQVMVNDLSRDTCPAKQVKCVVIDEAHKALGNHAY 191          
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Match: A0A6G0IFN3_LARCR (Fanconi anemia group M protein n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0IFN3_LARCR)

HSP 1 Score: 175 bits (443), Expect = 6.430e-52
Identity = 74/134 (55.22%), Postives = 105/134 (78.36%), Query Frame = 0
Query:    6 RLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGLVVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARIVYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSYPY 139
            R YQ  + E ALF+NTL+ LPTGLGKTFIA+VVM+NFYRW+P G +VFMAPT+PLV+QQ++AC++V   P+ H+A L G+T+ K+R+E W + R+ + TP ++ NDL ++T  A++I C+VIDEAHK  G++ Y
Sbjct:   66 RGYQMKISEAALFQNTLVCLPTGLGKTFIASVVMYNFYRWYPAGKIVFMAPTKPLVAQQIEACYKVMGIPQAHMAELTGSTAAKQRQEVWKTKRVFFLTPQVMVNDLSRETCPAKQIKCVVIDEAHKALGNHAY 199          
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Match: A0A3B5ANG5_9TELE (Fanconi anemia group M protein-like n=1 Tax=Stegastes partitus TaxID=144197 RepID=A0A3B5ANG5_9TELE)

HSP 1 Score: 176 bits (445), Expect = 7.010e-52
Identity = 75/134 (55.97%), Postives = 104/134 (77.61%), Query Frame = 0
Query:    6 RLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGLVVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARIVYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSYPY 139
            R YQ  + E ALF+NTL+ LPTGLGKTFIA+VVM+NFYRW+P G +VFMAPT+PLV+QQ++AC +V   P+ H+A L G+T+ K+R+E W S R+ + TP ++ANDL + T  A+++ C+VIDEAHK  G++ Y
Sbjct:   75 REYQLKISEAALFQNTLVCLPTGLGKTFIASVVMYNFYRWYPSGKIVFMAPTKPLVAQQIEACFKVMGIPQAHMAELTGSTAAKQRQELWRSKRVFFLTPQVMANDLSRDTCPAQQVKCVVIDEAHKALGNHAY 208          
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Match: A0A3B5L1V2_9TELE (Helicase ATP-binding domain-containing protein n=1 Tax=Xiphophorus couchianus TaxID=32473 RepID=A0A3B5L1V2_9TELE)

HSP 1 Score: 175 bits (444), Expect = 9.660e-52
Identity = 74/134 (55.22%), Postives = 105/134 (78.36%), Query Frame = 0
Query:    6 RLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGLVVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARIVYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSYPY 139
            R YQ  + E +LF+NTL+ LPTGLGKTFIA+VVM+NFYRW+P G +VFMAPT+PLV+QQ++AC++V   P++H+A L G+T+ K+R+E W S R+ + TP ++ NDL ++T  A+ I C+VIDEAHK  G++ Y
Sbjct:   67 RDYQLKMSEASLFQNTLVCLPTGLGKTFIASVVMYNFYRWYPAGKIVFMAPTKPLVAQQIEACYKVMGIPQDHMAELTGSTAAKQRQEVWKSKRVFFLTPQVMVNDLSRETCPAKEIKCVVIDEAHKALGNHAY 200          
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Match: UPI001E1BE7C0 (Fanconi anemia group M protein-like n=1 Tax=Desmodus rotundus TaxID=9430 RepID=UPI001E1BE7C0)

HSP 1 Score: 173 bits (439), Expect = 1.320e-51
Identity = 76/134 (56.72%), Postives = 99/134 (73.88%), Query Frame = 0
Query:    6 RLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGLVVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARIVYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSYPY 139
            R YQ ++   ALF NTL+ LPTGLGKTFIAAVVM+NFYRWFP G VVFMAPT+PLV+QQ++AC++V   P+ H+A + G+T    RKE W+S R+++ TP ++ NDL +    A  I C+VIDEAHK  G+Y Y
Sbjct:   95 RDYQLHIARAALFCNTLVCLPTGLGKTFIAAVVMYNFYRWFPSGKVVFMAPTKPLVTQQIEACYRVMGIPQSHMAEMTGSTQASTRKEIWHSKRVIFLTPQVMVNDLSRGACPAAEIKCLVIDEAHKALGNYAY 228          
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Match: A0A5A8D9V6_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D9V6_CAFRO)

HSP 1 Score: 183 bits (465), Expect = 1.480e-51
Identity = 82/138 (59.42%), Postives = 102/138 (73.91%), Query Frame = 0
Query:    2 QFEERLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGLVVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARIVYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSYPY 139
            ++ ER YQ  +   ALF NTL+SLPTGLGKTFIAAVVMHN+ RWFP G VVFMAPTRPLV+QQV+ACH++   P E  A +QG+ +   R+ YW    ++YCTP +L NDLE +  DARRIV +V+DEAH+ TG Y Y
Sbjct:   84 EYPEREYQLAIAGRALFENTLVSLPTGLGKTFIAAVVMHNYRRWFPSGKVVFMAPTRPLVAQQVEACHKIVGIPAEDTAQMQGSVAASLREGYWRERAVIYCTPQMLQNDLEARRVDARRIVLLVVDEAHRATGKYAY 221          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85249.19874.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S0PGU6_CAFRO3.390e-5559.42Hypothetical protein (Fragment) n=1 Tax=Cafeteria ... [more]
A0A418AL25_9STRA3.220e-5456.72Helicase ATP-binding domain-containing protein n=1... [more]
B8CFY5_THAPS1.590e-5354.74Atp-dependent RNA helicase (Fragment) n=1 Tax=Thal... [more]
A0A3Q2P0J9_FUNHE1.250e-5257.46Helicase ATP-binding domain-containing protein n=1... [more]
A0A834F547_ORYME1.850e-5255.97Fanconi anemia group M protein n=1 Tax=Oryzias mel... [more]
A0A6G0IFN3_LARCR6.430e-5255.22Fanconi anemia group M protein n=1 Tax=Larimichthy... [more]
A0A3B5ANG5_9TELE7.010e-5255.97Fanconi anemia group M protein-like n=1 Tax=Stegas... [more]
A0A3B5L1V2_9TELE9.660e-5255.22Helicase ATP-binding domain-containing protein n=1... [more]
UPI001E1BE7C01.320e-5156.72Fanconi anemia group M protein-like n=1 Tax=Desmod... [more]
A0A5A8D9V6_CAFRO1.480e-5159.42Uncharacterized protein n=3 Tax=Cafeteria roenberg... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR014001Helicase superfamily 1/2, ATP-binding domainSMARTSM00487ultradead3coord: 1..139
e-value: 0.0012
score: 27.9
IPR014001Helicase superfamily 1/2, ATP-binding domainPROSITEPS51192HELICASE_ATP_BIND_1coord: 12..139
score: 16.828
IPR011545DEAD/DEAH box helicase domainPFAMPF00270DEADcoord: 8..134
e-value: 1.2E-17
score: 64.3
NoneNo IPR availableGENE3D3.40.50.300coord: 6..139
e-value: 1.1E-46
score: 162.1
NoneNo IPR availablePANTHERPTHR14025FAMILY NOT NAMEDcoord: 4..139
NoneNo IPR availableTMHMMTMhelixcoord: 21..43
IPR039686FANCM/Mph1-likePANTHERPTHR14025:SF20FANCONI ANEMIA GROUP M PROTEINcoord: 4..139
IPR027417P-loop containing nucleoside triphosphate hydrolaseSUPERFAMILY52540P-loop containing nucleoside triphosphate hydrolasescoord: 3..136

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85249contigM-pyrifera_M_contig85249:291..707 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85249.19874.1mRNA_M-pyrifera_M_contig85249.19874.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig85249 291..707 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig85249.19874.1 ID=prot_M-pyrifera_M_contig85249.19874.1|Name=mRNA_M-pyrifera_M_contig85249.19874.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
DQFEERLYQRNLIEVALFRNTLISLPTGLGKTFIAAVVMHNFYRWFPDGL
VVFMAPTRPLVSQQVQACHQVCSFPEEHVANLQGTTSPKKRKEYWNSARI
VYCTPHILANDLEKKTFDARRIVCIVIDEAHKTTGSYPY
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR014001Helicase_ATP-bd
IPR011545DEAD/DEAH_box_helicase_dom
IPR039686FANCM/Mph1-like
IPR027417P-loop_NTPase