mRNA_M-pyrifera_M_contig85224.19863.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85224.19863.1
Unique NamemRNA_M-pyrifera_M_contig85224.19863.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Match: UPI00145A4612 (FliM/FliN family flagellar motor switch protein n=1 Tax=Nitratireductor sp. XY-223 TaxID=2561926 RepID=UPI00145A4612)

HSP 1 Score: 267 bits (682), Expect = 2.550e-85
Identity = 150/290 (51.72%), Postives = 182/290 (62.76%), Query Frame = 1
Query:    1 GQSGDRQTLNALGLALAERAAPLFEAAASRATGFTITAAIDDFDEGTLSELLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGDLPAAADITPRDLSAIERDVSSVVFKQFVESVKTVITAPPTGDVIIHPVLAEPPVQTDGSGTVPSVLLKLTLTAGDLEAPFQVILSQRTLLKTKVAEPAGEPPV--EKPEWLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRALLKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELIRDL 864
            GQSGDR+TL    L LAE         A +A G  +    D F+ G  S+LLA  DVN+V C A I+ WCDD+ L  NTVF IA++E MLGG +P    + PR LS IE DVSS++F QF ES+K+ I  P            E P   +G+   P V+L   L  G +EAPF V+L QR LLK+++AE     P   E+P W  QL+ QV++SHV LEA I+L   TLGEVARLQ GD+LPF DEG VR LL A GKELFWCEFGKAGNRYTVRV E H  E ELI+D+
Sbjct:   22 GQSGDRETLETQCLMLAEMTGLSLALNAGKAIGEPVDVEFDSFNAGPRSQLLAEFDVNSVVCPAYIDGWCDDITLAANTVFVIAVMECMLGGAIPEGKKLKPRALSDIELDVSSILFAQFAESLKSAIADPQPKAATAGQATQEQPEPEEGTEDTPCVMLTFQLRLGSVEAPFLVVLPQRPLLKSRIAEREDGKPAKPERPSWARQLTTQVSHSHVLLEARISLNELTLGEVARLQTGDVLPFDDEGGVRTLLSAGGKELFWCEFGKAGNRYTVRVQEPHRREHELIKDI 311          
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Match: UPI0013001057 (FliM/FliN family flagellar motor switch protein n=1 Tax=Pararhizobium haloflavum TaxID=2037914 RepID=UPI0013001057)

HSP 1 Score: 173 bits (439), Expect = 6.920e-49
Identity = 112/292 (38.36%), Postives = 162/292 (55.48%), Query Frame = 1
Query:    1 GQSGDRQTLNALGLALAERAAPLFEAAASRATGFTITAAIDDFDEGTLSELLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGDLPAAADITPRDLSAIERDVSSVVFKQFVESVKTVI--TAPPTGDVIIHPVLAEPPVQTDGSGTVPSVLLKLTLTAGDLEAPFQVILSQRTLLKTKVAEPAGEPPVEK--PEWLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRALLKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELIRDL 864
            GQ GDR+T+  +  A+ E           +AT   +  ++    EGT +E+ A  D  +  C   + EW DD++L  +    IA  E +LGG    AA    R LS IERDV+ V+F+ F  ++ T +  T    G     P+  E   + D       +L++L    G   A  Q +L Q  LLKT + +P       +  P+W+EQL+++V  SHVT++AN+ALA  TL   +RLQ GD+LPFADE  VR LLKA+GK+L+WCEFGKAGNRY +R+ + +  E++ IR L
Sbjct:   19 GQLGDRKTIAGIVTAIGEAICAPLTQKIFQATAIKLDCSLAGATEGTRAEMAAPFDGKSALCETTLTEWSDDVVLACDGGLVIAATERLLGGT--GAAKSAARPLSDIERDVAFVLFEAFASALGTTVGATGHECGFAFDGPLKRESDAREDAYAATLRLLVELD---GRTYA-LQAVLPQDMLLKTVIQKPGAPEGTSQRAPKWVEQLTHKVHMSHVTMQANVALAPVTLSAASRLQPGDVLPFADEKDVRVLLKANGKDLYWCEFGKAGNRYMLRLQDRYGSEEDFIRQL 304          
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Match: A0A3Q8XM64_9HYPH (Flagellar motor switch protein FliM n=2 Tax=Georhizobium profundi TaxID=2341112 RepID=A0A3Q8XM64_9HYPH)

HSP 1 Score: 162 bits (411), Expect = 1.040e-44
Identity = 102/292 (34.93%), Postives = 162/292 (55.48%), Query Frame = 1
Query:    1 GQSGDRQTLNALGLALAERAAPLFEAAASRATGFTITAAIDDFDEGTLSELLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGD---LPAAADITPRDLSAIERDVSSVVFKQFVESVKTVITAPPTGDVIIHPVLAEPPVQTDGSGTVPSVLLKLTLTAGDLEAPFQVILSQRTLLKTKVAEPAGEPPVEKPE-WLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRALLKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELIRDL 864
            G+ G+   + A   A+ +  A     A  +AT   ++   +   +G  +++ A+     V C   IE W  D++L  ++ F IA+ E +LGG+   +PA+     R LS IE+DV+ ++F+ F E+++  +       +  +P       ++D S    S +L L +T G      + ++ Q  +LKTK+AEPA      +P+ W EQLS +V  S+V LEA I L   +LG VARLQ G ++PFAD    R LL+A+GK+LFWCE GK+G RY VR+ E H  E++L+++L
Sbjct:   19 GRLGEASVIEAQMAAIGKATADRLAEALLQATSVAVSVVPETAPQGVRADMAATFGAQDVLCETTIEGWSLDLLLAVDSAFVIAMTERLLGGESDGVPAS-----RPLSEIEQDVAKLLFETFAETLRKAVYPNCDRAICSNPFQGPLKRESDASSADFSAVLVLGVTIGKASFKLRAMVPQAVVLKTKIAEPATAKIDTRPKHWTEQLSEKVQKSNVGLEARIRLVPLSLGTVARLQPGSVIPFADTKDTRVLLRANGKDLFWCELGKSGERYMVRLQERHGSEEDLMKEL 305          
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Match: UPI00094B296A (FliM/FliN family flagellar motor switch protein n=1 Tax=Rhizobium arenae TaxID=1856850 RepID=UPI00094B296A)

HSP 1 Score: 157 bits (397), Expect = 1.520e-42
Identity = 102/296 (34.46%), Postives = 152/296 (51.35%), Query Frame = 1
Query:    1 GQSGDRQTLNALGLALAERAAPLFEAAASRATGFTITAAIDDFDEGTLSELLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGDLPAAADITPRDLSAIERDVSSVVFKQFVESVKTVITAPPTGDVIIHPVLAEP------PVQTDGSGTVPSVLLKLTLTAGDLEAPFQVILSQRTLLKTKVAEP--AGEPPVEKPEWLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRALLKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELIRDL 864
            G  GD QT+  L   L +  +       +  T   IT     F+ G +S+L+ +L      C  G+  WC D IL  ++   I L+E +LG       +  PR LS IE DV+++VF++  E +KT + AP        PVL  P      P        V +  + +++  G + + F +I+ Q+ LLKT +  P   G+    K EW EQL  QV  S+V LEA I L   TL  V+RLQ GDI+PF D   VR  + A+G++L+ CEFG++G RYTVR+ + H  + +++  L
Sbjct:   22 GNLGDDQTVGKLAEELGQVFSEFLPDILNSETQQDITITYAGFESGLMSKLVTNLGDGVGLCNVGLRNWCQDFILGIDSPAIIGLVEMLLGASASEVEESKPRQLSDIELDVAAMVFEKIAEVLKTAVNAPGG----FEPVLGRPFNAGGKPSAVAEEEDVFAACINISIGLGPILSTFSIIVPQQPLLKTTIVFPKGTGQNRKAKTEWGEQLEQQVRRSNVNLEARIKLQSLTLNAVSRLQPGDIIPFHDAKDVRVEVNANGRDLYICEFGRSGTRYTVRIKDTHGSDNDILNHL 313          
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Match: UPI001FD1EEE9 (FliM/FliN family flagellar motor switch protein n=2 Tax=Rhizobium sp. CFBP 8762 TaxID=2775279 RepID=UPI001FD1EEE9)

HSP 1 Score: 156 bits (395), Expect = 2.940e-42
Identity = 109/294 (37.07%), Postives = 160/294 (54.42%), Query Frame = 1
Query:    1 GQSGDRQTLNAL----GLALAERAAPLFEAAASRATGFTITAAIDDFDEGTLSELLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGDLPAAADITPRDLSAIERDVSSVVFKQFVESVKTVITAPPTGDVIIHPVL-AEPPVQTDGSGTVPSVLLKLTLTAGDLEAPFQVILSQRTLLKTKVAE-PAGEPPVEKPE---WLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRALLKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELI 855
            G  GD +T+  L    G  LA+   PL +      +G  +T A    D GT+ EL+  L  +     A +  WC   +L  ++   IA++E +LG    A  +  PR LSAIE D+++++F+   E V+  +    T  VI+ P    E P     +  V +  + +T+  G + + F VI+ Q  LLKTK    PAG+PP  KPE   W +QL  QV  S VTL A+I L R TL  ++RLQ GD+L F D   VR  + A+G+EL+ CEFG+AG+RYTVRV + +  E++L+
Sbjct:   23 GTLGDAKTVAKLCGEFGAILAQALPPLLKTE----SGHDVTIAFAGSDTGTMDELVHRLGTSVAISDASLRNWCPHFVLGCDSPIIIAMMESLLGALPDAVTEPEPRALSAIEIDIAAMLFENIGEVVRMAVGLK-TEPVIVRPCNDTERPKPDATAAPVFAAAITMTMGLGPVLSTFSVIVPQAVLLKTKFLHAPAGQPP--KPEAAHWTDQLREQVQRSSVTLNAHIRLERMTLDAISRLQVGDVLMFQDTQDVRVDVSANGRELYICEFGRAGSRYTVRVKDTYGSEEDLL 309          
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Match: FLIM_RHIME (Flagellar motor switch protein FliM n=28 Tax=Sinorhizobium TaxID=28105 RepID=FLIM_RHIME)

HSP 1 Score: 155 bits (391), Expect = 1.180e-41
Identity = 104/296 (35.14%), Postives = 154/296 (52.03%), Query Frame = 1
Query:    1 GQSGDRQTLNALGLALAERAAPLFEAAASRATGFTITAAIDDFDEGTLSELLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGDLPAAADITPRDLSAIERDVSSVVFKQFVESVKTVITAPPTGDVIIHPVLAEPPVQTDGSGTVP------SVLLKLTLTAGDLEAPFQVILSQRTLLKTKVA--EPAGEPPVEKPEWLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRALLKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELIRDL 864
            G  GD + +    L LA+    L        TG  +T A   F  G  +EL+A+L    +     +  WC D  +  ++   IAL+E +LG +  +  +  PR LS IE DV+  VF    E ++T + AP        PV+  P    + +   P      +  + +T+  G + + F VI+ Q TLLKT+V   + AGE    K EW EQL  QV  S V LEA I L   TL  ++RLQ GD++PF D   VR  + A+G++L+ CEFG++G+RYTVRV + H  EQ+++R +
Sbjct:   22 GALGDDKVIGRTALELAQVFDELLPGVLQSETGCDVTIAYAGFRTGLRNELIAALGDGVLLGDLSLRNWCADFQVGCDSPVLIALVEALLGAEPTSIEEPAPRSLSKIEIDVALPVFHGIAEVLRTAVNAPGG----FEPVVGRPYNSAERAKPDPVLQDVFAASIDMTIGLGPVLSTFSVIVPQSTLLKTRVVSRKGAGEDRNAKTEWTEQLEEQVRRSAVALEARIRLESLTLDTLSRLQAGDVIPFHDGQDVRVEVSANGRDLYVCEFGRSGSRYTVRVKDTHGSEQDILRHI 313          
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Match: A0A1Q9AST5_9HYPH (Flagellar motor switch protein FliM n=2 Tax=Rhizobium oryzae TaxID=464029 RepID=A0A1Q9AST5_9HYPH)

HSP 1 Score: 154 bits (388), Expect = 2.970e-41
Identity = 93/264 (35.23%), Postives = 145/264 (54.92%), Query Frame = 1
Query:   94 TGFTITAAIDDFDEGTLSELLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGDLPAAADITPRDLSAIERDVSSVVFKQFVESVKTVITAPPTGDVIIHPVLAEPPVQTDGS-----GTVPSVLLKLTLTAGDLEAPFQVILSQRTLLKTKVAEPAGEPPVEKPE--WLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRALLKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELIRDL 864
            TGF +      FD G   EL+A+L      C   +  WCD +I C + +  + ++E +LG      +   PR LSAIE DV++++F++    +K+ + A  +G     P L  P   T+ S       + +  +K++L AG + A F +++  + LLKTK+  P G     K +  W +QL  QV  S V+LEA I L   TL +V RLQ GDI+ F D   VR  + A+G++L+ CEFG++G RYTVR+++ H  E+E++  L
Sbjct:   51 TGFPVEIGYAGFDSGVKQELVAALGSTVAVCDGTLRNWCDFVIACDSPIV-MGMVEMLLGAAPETISPPVPRALSAIELDVAAMLFEKVANVLKSAVNA--SGG--FEPTLERPLNATERSIPEEAADIHAAAVKISLVAGPISAIFTIVIPHKALLKTKIVFPKGIGQARKTKNAWSDQLEQQVHRSAVSLEARIRLEDLTLNDVCRLQAGDIIAFKDVHDVRVDVNANGRDLYVCEFGRSGERYTVRIMDTHGSEKEILDHL 309          
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Match: UPI00111BDDF8 (FliM/FliN family flagellar motor switch protein n=5 Tax=Rhizobiaceae TaxID=82115 RepID=UPI00111BDDF8)

HSP 1 Score: 154 bits (388), Expect = 3.270e-41
Identity = 104/296 (35.14%), Postives = 155/296 (52.36%), Query Frame = 1
Query:    1 GQSGDRQTLNALGLALAERAAPLFEAAASRATGFTITAAIDDFDEGTLSELLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGDLPAAADITPRDLSAIERDVSSVVFKQFVESVKTVITAPPTGDVIIHPVLAEP---PVQTDGSGTVPSVL---LKLTLTAGDLEAPFQVILSQRTLLKTKVAEP--AGEPPVEKPEWLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRALLKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELIRDL 864
            G  G+ + +  + L L +  + L        TG  IT     F  G  +E++A L   AV     +  WC D  +  ++   IAL+E +LG +  +  +  PR LS IE DV   VF +  E ++T + AP        PV+  P   P +     T+  V    + +T+  G + + F VI+ Q  LLKT++A    AGE    K EW EQL  QV  S VTLEA I L   TL  ++RLQ GD++PF D   VR  + A+G++L+ CEFG++G++YTVRV + H  EQ+++R +
Sbjct:   22 GALGEDKIIGRIALELGQVFSELLPDMLEAETGCDITIGYAGFRTGLRNEVIADLGDGAVLGDVSLRNWCTDFQIGCDSPVLIALVEAVLGAEPTSIEEPLPRPLSKIEIDVGVPVFHKVAEVLRTAVDAPGG----FEPVVGRPYNSPERPKPDPTIEDVYAAAIDMTIGLGPVLSTFSVIVPQSVLLKTEIASVRGAGENQNAKSEWAEQLEEQVRRSAVTLEARIRLESLTLNTISRLQPGDVIPFHDGSEVRVDVNANGRDLYVCEFGRSGSKYTVRVRDTHGSEQDILRHI 313          
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Match: A0A249P701_9HYPH (Flagellar motor switch protein FliM n=1 Tax=Ensifer sojae CCBAU 05684 TaxID=716928 RepID=A0A249P701_9HYPH)

HSP 1 Score: 153 bits (387), Expect = 4.600e-41
Identity = 100/292 (34.25%), Postives = 155/292 (53.08%), Query Frame = 1
Query:    1 GQSGDRQTLNALGLALAERAAPLFEAAASRATGFTITAAIDDFDEGTLSELLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGDLPAAADITPRDLSAIERDVSSVVFKQFVESVKTVITAPPTGDVII-HPVLAEPPVQTD-GSGTVPSVLLKLTLTAGDLEAPFQVILSQRTLLKTKVAEP--AGEPPVEKPEWLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRALLKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELIRDL 864
            G  GD + +    L L +    +        TG  IT        G   EL+A L    +   A +  WC++  +  ++   I L+E +LG +     +  PR LS IE DV++ VF +  E ++  + A    + ++  P  +E   Q D  +  V +  +++T+  G + + F VI+ QRTLLKT++  P  AG+    KPEW EQL  QV  S VTLEA I L   TL  ++RLQ GD++PF D   V+  + A+G+EL+ CEFG++G +YTVRV + H  EQ+++R +
Sbjct:   22 GALGDDKVIGRTALELGQAFGEVLPGLLKTETGHDITIGYAGCKTGLRDELIAELGDGFLISDASLRNWCEEFQIGCDSPVLITLVEALLGAEPTGIEEPEPRALSKIEIDVAAPVFDRIAEVLRLAVNAQGGHEPVLGRPYNSEERPQADPATADVYAASIEMTIGLGPVLSTFCVIIPQRTLLKTQIIMPGVAGQTTGVKPEWTEQLEEQVRRSAVTLEARIRLDSLTLDTISRLQPGDVIPFHDGQDVQVEVNANGRELYICEFGRSGAKYTVRVKDTHGSEQDILRHI 313          
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Match: A0A0T1XNZ2_9HYPH (Flagellar motor switch protein FliM n=1 Tax=Rhizobium sp. Root482 TaxID=1736543 RepID=A0A0T1XNZ2_9HYPH)

HSP 1 Score: 153 bits (386), Expect = 6.470e-41
Identity = 96/261 (36.78%), Postives = 140/261 (53.64%), Query Frame = 1
Query:   94 TGFTITAAIDDFDEGTLSELLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGDLPAAADITPRDLSAIERDVSSVVFKQFVESVKTVITAPPTGDVII-HPVLA-EPPVQTDGSGTVPSVLLKLTLTAGDLEAPFQVILSQRTLLKTKVAEP--AGEPPVEKPEWLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRALLKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELIRDL 864
            TGF I  A   FD G  ++L+A L      C A +  WC D  +  ++   I L+E +LG    A  +  PR LS IE DV+++VF +  E +K+ I A    ++ +  P  A E P        V +  + +T+  G + + F VI+ Q+ LLKT V  P   G     K EW EQL  Q+  S +TLEA I L   TL  ++RLQ GD++PF D   V   + A+G+EL+ CEFG+AG +YTVR+ + H  E +++  L
Sbjct:   53 TGFDIDIAYSGFDTGLKTDLIARLGNGVALCDASLRNWCSDFTISCDSPVIITLMEALLGAPPTAIEEPKPRTLSKIELDVATMVFDKIAEVLKSAIGAAGGFELQLGRPYNATERPAADPDVEDVHAACINVTMGIGPVLSTFSVIVPQQPLLKTNVVLPKGVGHGRKAKGEWGEQLEQQIRRSAITLEARINLQSLTLDTISRLQPGDVIPFQDAKDVHVEVNANGRELYVCEFGRAGAKYTVRIKDTHGSENDILHHL 313          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85224.19863.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00145A46122.550e-8551.72FliM/FliN family flagellar motor switch protein n=... [more]
UPI00130010576.920e-4938.36FliM/FliN family flagellar motor switch protein n=... [more]
A0A3Q8XM64_9HYPH1.040e-4434.93Flagellar motor switch protein FliM n=2 Tax=Georhi... [more]
UPI00094B296A1.520e-4234.46FliM/FliN family flagellar motor switch protein n=... [more]
UPI001FD1EEE92.940e-4237.07FliM/FliN family flagellar motor switch protein n=... [more]
FLIM_RHIME1.180e-4135.14Flagellar motor switch protein FliM n=28 Tax=Sinor... [more]
A0A1Q9AST5_9HYPH2.970e-4135.23Flagellar motor switch protein FliM n=2 Tax=Rhizob... [more]
UPI00111BDDF83.270e-4135.14FliM/FliN family flagellar motor switch protein n=... [more]
A0A249P701_9HYPH4.600e-4134.25Flagellar motor switch protein FliM n=1 Tax=Ensife... [more]
A0A0T1XNZ2_9HYPH6.470e-4136.78Flagellar motor switch protein FliM n=1 Tax=Rhizob... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85224contigM-pyrifera_M_contig85224:3..866 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score163.7
Seed ortholog evalue1.3e-37
Seed eggNOG ortholog935557.ATYB01000014_gene1638
Preferred namefliM
KEGG koko:K02416,ko:K03225
KEGG TC3.A.6.1
KEGG Pathwayko02030,ko02040,ko03070,map02030,map02040,map03070
KEGG ModuleM00332,M00542,M00660
Hectar predicted targeting categoryother localisation
GOsGO:0005575,GO:0005623,GO:0005886,GO:0006935,GO:0008150,GO:0009288,GO:0009425,GO:0009605,GO:0016020,GO:0040011,GO:0042221,GO:0042330,GO:0042995,GO:0043226,GO:0043228,GO:0044403,GO:0044419,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0050896,GO:0051701,GO:0051704,GO:0052116,GO:0052126,GO:0052127,GO:0052143,GO:0052192,GO:0052195,GO:0052216,GO:0052243,GO:0071944
EggNOG free text desc.flagellar motor switch protein
EggNOG OGs1Q778@1224,2VDBS@28211,4BB4Q@82115,COG1868@1,COG1868@2
COG Functional cat.N
Best tax levelRhizobiaceae
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko02035,ko02044
Exons1
Model size864
Cds size864
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816760.7536185-CDS-M-pyrifera_M_contig85224:2..8661622816760.7536185-CDS-M-pyrifera_M_contig85224:2..866Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85224 3..866 -
1692278162.5143998-CDS-M-pyrifera_M_contig85224:2..8661692278162.5143998-CDS-M-pyrifera_M_contig85224:2..866Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85224 3..866 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85224.19863.1prot_M-pyrifera_M_contig85224.19863.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85224 3..866 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85224.19863.1

>prot_M-pyrifera_M_contig85224.19863.1 ID=prot_M-pyrifera_M_contig85224.19863.1|Name=mRNA_M-pyrifera_M_contig85224.19863.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=288bp
GQSGDRQTLNALGLALAERAAPLFEAAASRATGFTITAAIDDFDEGTLSE
LLASLDVNAVTCRAGIEEWCDDMILCGNTVFFIALLEGMLGGDLPAAADI
TPRDLSAIERDVSSVVFKQFVESVKTVITAPPTGDVIIHPVLAEPPVQTD
GSGTVPSVLLKLTLTAGDLEAPFQVILSQRTLLKTKVAEPAGEPPVEKPE
WLEQLSNQVTNSHVTLEANIALARSTLGEVARLQCGDILPFADEGTVRAL
LKASGKELFWCEFGKAGNRYTVRVLEAHVPEQELIRDL
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mRNA from alignment at M-pyrifera_M_contig85224:3..866-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85224.19863.1 ID=mRNA_M-pyrifera_M_contig85224.19863.1|Name=mRNA_M-pyrifera_M_contig85224.19863.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig85224:3..866- (Macrocystis pyrifera P11B4 male)
GGGCAATCGGGCGACCGTCAGACATTGAACGCGCTTGGCCTCGCCCTGGC CGAACGCGCCGCACCCCTTTTCGAAGCGGCGGCGAGCCGTGCCACCGGAT TCACCATAACTGCCGCCATCGACGATTTTGACGAGGGCACTCTTTCGGAA TTGCTGGCGTCACTCGATGTCAATGCGGTGACGTGCAGGGCCGGGATCGA AGAGTGGTGCGATGATATGATCCTGTGCGGAAACACCGTGTTCTTCATTG CATTGCTGGAGGGTATGCTGGGTGGGGACCTGCCGGCGGCTGCCGATATC ACGCCACGCGACCTCTCAGCCATCGAGCGCGACGTTTCCTCCGTCGTCTT CAAGCAGTTTGTCGAGAGCGTGAAAACCGTTATCACCGCCCCGCCAACAG GTGATGTCATTATACATCCGGTCCTGGCGGAACCGCCGGTGCAGACGGAC GGATCGGGTACGGTTCCGTCGGTTTTGCTGAAATTAACCCTGACGGCCGG TGATCTCGAGGCGCCTTTCCAGGTCATCCTGTCCCAACGCACCTTACTGA AGACCAAGGTTGCAGAACCGGCCGGCGAACCGCCGGTCGAAAAACCCGAA TGGCTGGAACAGCTCAGCAACCAGGTCACCAATTCCCATGTGACGCTGGA GGCCAACATCGCCCTGGCCCGCTCGACTCTCGGCGAGGTTGCCCGTCTGC AATGTGGCGACATCCTGCCCTTCGCGGACGAGGGGACAGTGCGGGCGCTG CTGAAAGCAAGCGGCAAGGAACTCTTCTGGTGCGAGTTCGGCAAGGCCGG AAATCGGTACACGGTGAGAGTTCTGGAAGCCCATGTGCCAGAGCAGGAGT TGATACGGGATCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85224:3..866-

>mRNA_M-pyrifera_M_contig85224.19863.1 ID=mRNA_M-pyrifera_M_contig85224.19863.1|Name=mRNA_M-pyrifera_M_contig85224.19863.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1728bp|location=Sequence derived from alignment at M-pyrifera_M_contig85224:3..866- (Macrocystis pyrifera P11B4 male)
GGGCAATCGGGCGACCGTCAGACATTGAACGCGCTTGGCCTCGCCCTGGC
CGAACGCGCCGCACCCCTTTTCGAAGCGGCGGCGAGCCGTGCCACCGGAT
TCACCATAACTGCCGCCATCGACGATTTTGACGAGGGCACTCTTTCGGAA
TTGCTGGCGTCACTCGATGTCAATGCGGTGACGTGCAGGGCCGGGATCGA
AGAGTGGTGCGATGATATGATCCTGTGCGGAAACACCGTGTTCTTCATTG
CATTGCTGGAGGGTATGCTGGGTGGGGACCTGCCGGCGGCTGCCGATATC
ACGCCACGCGACCTCTCAGCCATCGAGCGCGACGTTTCCTCCGTCGTCTT
CAAGCAGTTTGTCGAGAGCGTGAAAACCGTTATCACCGCCCCGCCAACAG
GTGATGTCATTATACATCCGGTCCTGGCGGAACCGCCGGTGCAGACGGAC
GGATCGGGTACGGTTCCGTCGGTTTTGCTGAAATTAACCCTGACGGCCGG
TGATCTCGAGGCGCCTTTCCAGGTCATCCTGTCCCAACGCACCTTACTGA
AGACCAAGGTTGCAGAACCGGCCGGCGAACCGCCGGTCGAAAAACCCGAA
TGGCTGGAACAGCTCAGCAACCAGGTCACCAATTCCCATGTGACGCTGGA
GGCCAACATCGCCCTGGCCCGCTCGACTCTCGGCGAGGTTGCCCGTCTGC
AATGTGGCGACATCCTGCCCTTCGCGGACGAGGGGACAGTGCGGGCGCTG
CTGAAAGCAAGCGGCAAGGAACTCTTCTGGTGCGAGTTCGGCAAGGCCGG
AAATCGGTACACGGTGAGAGTTCTGGAAGCCCATGTGCCAGAGCAGGAGT
TGATACGGGATCTGGGGCAATCGGGCGACCGTCAGACATTGAACGCGCTT
GGCCTCGCCCTGGCCGAACGCGCCGCACCCCTTTTCGAAGCGGCGGCGAG
CCGTGCCACCGGATTCACCATAACTGCCGCCATCGACGATTTTGACGAGG
GCACTCTTTCGGAATTGCTGGCGTCACTCGATGTCAATGCGGTGACGTGC
AGGGCCGGGATCGAAGAGTGGTGCGATGATATGATCCTGTGCGGAAACAC
CGTGTTCTTCATTGCATTGCTGGAGGGTATGCTGGGTGGGGACCTGCCGG
CGGCTGCCGATATCACGCCACGCGACCTCTCAGCCATCGAGCGCGACGTT
TCCTCCGTCGTCTTCAAGCAGTTTGTCGAGAGCGTGAAAACCGTTATCAC
CGCCCCGCCAACAGGTGATGTCATTATACATCCGGTCCTGGCGGAACCGC
CGGTGCAGACGGACGGATCGGGTACGGTTCCGTCGGTTTTGCTGAAATTA
ACCCTGACGGCCGGTGATCTCGAGGCGCCTTTCCAGGTCATCCTGTCCCA
ACGCACCTTACTGAAGACCAAGGTTGCAGAACCGGCCGGCGAACCGCCGG
TCGAAAAACCCGAATGGCTGGAACAGCTCAGCAACCAGGTCACCAATTCC
CATGTGACGCTGGAGGCCAACATCGCCCTGGCCCGCTCGACTCTCGGCGA
GGTTGCCCGTCTGCAATGTGGCGACATCCTGCCCTTCGCGGACGAGGGGA
CAGTGCGGGCGCTGCTGAAAGCAAGCGGCAAGGAACTCTTCTGGTGCGAG
TTCGGCAAGGCCGGAAATCGGTACACGGTGAGAGTTCTGGAAGCCCATGT
GCCAGAGCAGGAGTTGATACGGGATCTG
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