mRNA_M-pyrifera_M_contig109491.1986.1 (mRNA) Macrocystis pyrifera P11B4 male
|
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Match: A9SXS9_PHYPA (Non-lysosomal glucosylceramidase n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A9SXS9_PHYPA) HSP 1 Score: 129 bits (324), Expect = 3.820e-31 Identity = 70/172 (40.70%), Postives = 101/172 (58.72%), Query Frame = 1
Query: 79 PLTFGIAAKEAAIVGENGSRTTADSAQVHCAPSFETTGLGKALWTGFSLAGKAMMVGSHH--TSHSVEGVGIGSAVSSRVTVPPGTTVEIVFSLSWDQPVVRFGQGRGYHPRYTRFYGISGSAAPQMCVDALRHWRDWDSAVEAWQETILADESLPDSYKCSLFNQLYYLVS 588
P+TF IAAKE V T + E K +WT G + ++ + +G IG+A+++RV VPPG ++VFSL+WD P V+F +G+ YH RYT FYG +G AA ++ DALR +R W+ A+E WQ+ +L DE LP+ Y+ +LFN+LYYLV+
Sbjct: 306 PVTFAIAAKEMRDV-------TLTTCPCFSLGGKEVEVTAKDMWTEVKENGSFDKENWNFKPSAPTRQGSAIGAAIAARVEVPPGEKRDVVFSLAWDSPEVKFLKGKSYHRRYTSFYGTAGDAASKLTRDALRDYRKWEIAIEDWQQPVLKDEKLPEWYRVTLFNELYYLVA 470
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Match: A0A1Y1I8U2_KLENI (Uncharacterized protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1I8U2_KLENI) HSP 1 Score: 128 bits (321), Expect = 1.000e-30 Identity = 69/177 (38.98%), Postives = 109/177 (61.58%), Query Frame = 1
Query: 76 DPLTFGIAAKEAAIVGENGSRTTADSAQVHCAPSFETTGLGKALWTGFSLAGKAMMVGSHHTS------HSVEGVGIGSAVSSRVTVPPGTTVEIVFSLSWDQPVVRFGQGRGYHPRYTRFYGISGSAAPQMCVDALRHWRDWDSAVEAWQETILADESLPDSYKCSLFNQLYYLVS 588
D T+ IAA+++ V TT ++ V + ++ KA+W + GK + + + T+ S G IG+AV + V VPPG E+VFSL+WD PVVRF +G Y RYT+F+G +G+AAP++ A+ + R W++A+E WQ+ I+ D+++P+ Y+ +LFN+LYYLVS
Sbjct: 327 DKFTWAIAAQQSQEVAV----TTCETFDVEGSTPYDA----KAVWDEIAHHGKFISMEARGTAVSKTSTKSKPGKSIGAAVCATVVVPPGEEREVVFSLAWDAPVVRFSEGSAYWKRYTQFFGRAGNAAPKLVHHAILNHRSWEAAIEEWQKPIIDDDTVPEWYRITLFNELYYLVS 495
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Match: A0A2R6X0R6_MARPO (Uncharacterized protein n=2 Tax=Marchantia polymorpha TaxID=3197 RepID=A0A2R6X0R6_MARPO) HSP 1 Score: 127 bits (319), Expect = 1.800e-30 Identity = 56/107 (52.34%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 268 SVEGVGIGSAVSSRVTVPPGTTVEIVFSLSWDQPVVRFGQGRGYHPRYTRFYGISGSAAPQMCVDALRHWRDWDSAVEAWQETILADESLPDSYKCSLFNQLYYLVS 588
S++G IG+AV++ V +PPG +VFSL+WD PVV+F +GR YH RYT+FYG SG+AA ++ DAL +R W+ ++ WQ IL DE LP+ Y+ +LFN+LYYLV+
Sbjct: 356 SLKGEEIGAAVAAHVVIPPGEKRNVVFSLAWDAPVVKFMKGRSYHRRYTQFYGTSGNAASKIAHDALLGYRKWEMDIDGWQRPILRDEKLPEWYRITLFNELYYLVA 462
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Match: A0A0D3AT97_BRAOL (Non-lysosomal glucosylceramidase n=12 Tax=Brassiceae TaxID=981071 RepID=A0A0D3AT97_BRAOL) HSP 1 Score: 122 bits (307), Expect = 7.170e-29 Identity = 72/176 (40.91%), Postives = 94/176 (53.41%), Query Frame = 1
Query: 79 PLTFGIAAKEAAIVGENGSRTTADSAQVHCAPSFETTGLG------KALWTGFSLAGKAMMVGSHHTSHSVEGVGIGSAVSSRVTVPPGTTVEIVFSLSWDQPVVRFGQGRGYHPRYTRFYGISGSAAPQMCVDALRHWRDWDSAVEAWQETILADESLPDSYKCSLFNQLYYLVS 588
P+T+ IAA+E D V P F +G +A+W + S S G IG+A++++V VPPG + FSLSWD P VRF + R YH RYTRFYG G AA M DAL ++ +W+S +E WQ TIL D SLPD Y+ +LFN+LYY S
Sbjct: 271 PVTYAIAAQET------------DDVSVSECPCFLVSGYSPNEITPRAMWDEIKKNKSFDQLPCEPGSPSRPGTAIGAAIAAKVKVPPGCDRTVTFSLSWDCPEVRFNE-RTYHRRYTRFYGSLGDAAVNMARDALLNYGNWESQIEEWQNTILLDTSLPDWYRVTLFNELYYFNS 433
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Match: A0A0D6QZ21_ARACU (Uncharacterized protein n=2 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6QZ21_ARACU) HSP 1 Score: 122 bits (306), Expect = 9.960e-29 Identity = 67/176 (38.07%), Postives = 95/176 (53.98%), Query Frame = 1
Query: 79 PLTFGIAAKEAAIVGENGSRTTADSAQVHCAPSFETTG-----LGKALWTGFSLAGKA-MMVGSHHTSHSVEGVGIGSAVSSRVTVPPGTTVEIVFSLSWDQPVVRFGQGRGYHPRYTRFYGISGSAAPQMCVDALRHWRDWDSAVEAWQETILADESLPDSYKCSLFNQLYYLVS 588
P+TF IAA++ + V V P F TG + +W G + S + S G IG AVS+ V VPP + F+L+WD P V+F G+ YH RYT+FYG G+AA + DA+ ++W++A+E+WQ IL DE LP+ Y+ +LFN+LYY VS
Sbjct: 333 PITFAIAAQQTSDVN------------VSLCPCFSMTGNDVNFSARDMWLQMKELGTFDQNISSKSSPASEPGSSIGGAVSASVVVPPHEKKIVTFALAWDSPQVKFASGKSYHRRYTKFYGTHGNAAVDLVHDAILEHQNWEAAIESWQRPILEDEKLPEWYRITLFNELYYFVS 496
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Match: A0A178V0J0_ARATH (Uncharacterized protein n=1 Tax=Arabidopsis thaliana TaxID=3702 RepID=A0A178V0J0_ARATH) HSP 1 Score: 120 bits (302), Expect = 2.810e-28 Identity = 72/176 (40.91%), Postives = 97/176 (55.11%), Query Frame = 1
Query: 79 PLTFGIAAKEAAIVGENGSRTTADSAQVHCAPSFETTG------LGKALWTGFSLAGKAMMVGSHHTSHSVEGVGIGSAVSSRVTVPPGTTVEIVFSLSWDQPVVRFGQGRGYHPRYTRFYGISGSAAPQMCVDALRHWRDWDSAVEAWQETILADESLPDSYKCSLFNQLYYLVS 588
P+T+ IAA+E T D C P F +G K +W + S S S G IG+A++++V VPPG + FSLSWD P VRF + + YH RYT+FYG G AA +M DAL ++ DW+S +EAWQ IL+D +LPD Y+ +LFN+LYY S
Sbjct: 12 PVTYAIAAQE-----------TEDVHVSEC-PCFLVSGHSPKEITAKEMWDEIKKNKSFDELNSEPGSPSRPGTSIGAAIAAKVKVPPGCDRTVTFSLSWDCPEVRFNE-KTYHRRYTKFYGNLGDAAVKMARDALLNYVDWESQIEAWQSPILSDTTLPDWYRVTLFNELYYFNS 174
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Match: A0A3N6RQM1_BRACR (Uncharacterized protein (Fragment) n=1 Tax=Brassica cretica TaxID=69181 RepID=A0A3N6RQM1_BRACR) HSP 1 Score: 120 bits (301), Expect = 3.070e-28 Identity = 59/109 (54.13%), Postives = 74/109 (67.89%), Query Frame = 1
Query: 262 SHSVEGVGIGSAVSSRVTVPPGTTVEIVFSLSWDQPVVRFGQGRGYHPRYTRFYGISGSAAPQMCVDALRHWRDWDSAVEAWQETILADESLPDSYKCSLFNQLYYLVS 588
S S G IG+A++++V VPPG + FSLSWD P VRF + R YH RYTRFYG G AA M DAL ++ +W+S +E WQ TIL D SLPD Y+ +LFN+LYY S
Sbjct: 1 SPSRPGTAIGAAIAAKVKVPPGCDRTVTFSLSWDCPEVRFNE-RTYHRRYTRFYGSLGDAAVNMARDALLNYGNWESQIEEWQNTILLDTSLPDWYRVTLFNELYYFNS 108
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Match: F4JLJ2_ARATH (Non-lysosomal glucosylceramidase n=16 Tax=Camelineae TaxID=980083 RepID=F4JLJ2_ARATH) HSP 1 Score: 120 bits (302), Expect = 3.360e-28 Identity = 72/176 (40.91%), Postives = 97/176 (55.11%), Query Frame = 1
Query: 79 PLTFGIAAKEAAIVGENGSRTTADSAQVHCAPSFETTG------LGKALWTGFSLAGKAMMVGSHHTSHSVEGVGIGSAVSSRVTVPPGTTVEIVFSLSWDQPVVRFGQGRGYHPRYTRFYGISGSAAPQMCVDALRHWRDWDSAVEAWQETILADESLPDSYKCSLFNQLYYLVS 588
P+T+ IAA+E T D C P F +G K +W + S S S G IG+A++++V VPPG + FSLSWD P VRF + + YH RYT+FYG G AA +M DAL ++ DW+S +EAWQ IL+D +LPD Y+ +LFN+LYY S
Sbjct: 275 PVTYAIAAQE-----------TEDVHVSEC-PCFLVSGHSPKEITAKEMWDEIKKNKSFDELNSEPGSPSRPGTSIGAAIAAKVKVPPGCDRTVTFSLSWDCPEVRFNE-KTYHRRYTKFYGNLGDAAVKMARDALLNYVDWESQIEAWQSPILSDTTLPDWYRVTLFNELYYFNS 437
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Match: A0A1Q3BPG5_CEPFO (Non-lysosomal glucosylceramidase n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3BPG5_CEPFO) HSP 1 Score: 117 bits (293), Expect = 5.420e-27 Identity = 66/180 (36.67%), Postives = 97/180 (53.89%), Query Frame = 1
Query: 64 ATYDDPLTFGIAAKEAAIVGENGSRTTADSAQVHCAPSFETTGLGKAL-----WTGFSLAGKAMMVGSHHTSHSVEGVGIGSAVSSRVTVPPGTTVEIVFSLSWDQPVVRFGQGRGYHPRYTRFYGISGSAAPQMCVDALRHWRDWDSAVEAWQETILADESLPDSYKCSLFNQLYYLVS 588
A P+TF IAA+E D V P F +G K + W G + + TS + G +G+A+++ +T+P + + FSL+WD P V+F + YH RYTRFYG G AA + DA+ +W+S +EAWQ+ ILAD+S+P+ Y +LFN+LYYLV+
Sbjct: 276 ANGQPPITFAIAAQET------------DDVHVSECPCFLISGNSKGITAKDMWNEIKEHGSFDHLDYNETSPTEPGSSVGAAIAASLTIPSDSVRTVTFSLAWDCPEVKFSS-KTYHRRYTRFYGCLGDAAAAIAHDAILEHANWESQIEAWQQPILADKSVPEWYPVTLFNELYYLVA 442
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Match: A0A6D2K6U6_9BRAS (Non-lysosomal glucosylceramidase n=5 Tax=Coluteocarpeae TaxID=1394505 RepID=A0A6D2K6U6_9BRAS) HSP 1 Score: 116 bits (291), Expect = 1.010e-26 Identity = 70/170 (41.18%), Postives = 97/170 (57.06%), Query Frame = 1
Query: 79 PLTFGIAAKEAAIVGENGSRTTADSAQVHCAPSFETTGLGKALWTGFSLAGKAMMVGSHHTSHSVEGVGIGSAVSSRVTVPPGTTVEIVFSLSWDQPVVRFGQGRGYHPRYTRFYGISGSAAPQMCVDALRHWRDWDSAVEAWQETILADESLPDSYKCSLFNQLYYLVS 588
P+T+ IAAKE V + S AP+ T G +W + S+ + S G IG+AV+++V VPPG + FSLSWD P VRF + + YH RYTRFYG G+AA M DAL ++ +W++ +E WQ ILAD +LP+ Y+ +LFN+LYY S
Sbjct: 283 PVTYAIAAKETEDVRVSSCPCFLVSGN---APNQITAG---DMWDEIKKNASFDKLTSNACTPSKPGTSIGAAVAAKVKVPPGCERTVTFSLSWDCPEVRFDK-KTYHRRYTRFYGGLGNAAVAMARDALLNFSEWETQIEDWQAPILADTTLPEWYRITLFNELYYFNS 445 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109491.1986.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109491.1986.1 >prot_M-pyrifera_M_contig109491.1986.1 ID=prot_M-pyrifera_M_contig109491.1986.1|Name=mRNA_M-pyrifera_M_contig109491.1986.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=191bp MVNKRTKTVSLGPKERATYDDPLTFGIAAKEAAIVGENGSRTTADSAQVHback to top mRNA from alignment at M-pyrifera_M_contig109491:2..589- Legend: UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109491.1986.1 ID=mRNA_M-pyrifera_M_contig109491.1986.1|Name=mRNA_M-pyrifera_M_contig109491.1986.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=588bp|location=Sequence derived from alignment at M-pyrifera_M_contig109491:2..589- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109491:2..589- >mRNA_M-pyrifera_M_contig109491.1986.1 ID=mRNA_M-pyrifera_M_contig109491.1986.1|Name=mRNA_M-pyrifera_M_contig109491.1986.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1146bp|location=Sequence derived from alignment at M-pyrifera_M_contig109491:2..589- (Macrocystis pyrifera P11B4 male)back to top |