mRNA_M-pyrifera_M_contig8521.19860.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8521.19860.1
Unique NamemRNA_M-pyrifera_M_contig8521.19860.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Match: D7FNP7_ECTSI (Caffeate O-Methyltransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FNP7_ECTSI)

HSP 1 Score: 411 bits (1057), Expect = 2.390e-142
Identity = 187/216 (86.57%), Postives = 205/216 (94.91%), Query Frame = 1
Query:    1 WYERAYNYWEDGQNCPLDDDGVLGGYGHISPTDIAGSKIFLDELKAMRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVGRDSDRTTCVCVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAALKKGGLVVIKDNVVGEGEGAFKVDSEDSSMTRSLGYFRSLFKHGGLKVLHQQQQEGFPGEIFPVYMFALE 648
            WYERAY+YWEDG NCP+DDDGVLGGYGHISPTDIAGS  FLDELK MRPLLGDE AADCGAGIGRVTKHLLLDRFDTVDIVEQSPRL+QAAP+YVGRD DRTTCVCVGLQDFFPPE+SYDL WIQWVVGHFTDVD LKL+ RCR+AL+KGGL+V+KDNV+G+GEGAFKVDSEDSSMTRSLGYFRSLF HGG++V+HQ +Q+GFPGE+FPVYMFALE
Sbjct:  102 WYERAYDYWEDGDNCPVDDDGVLGGYGHISPTDIAGSAAFLDELKRMRPLLGDETAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLIQAAPKYVGRDRDRTTCVCVGLQDFFPPEDSYDLVWIQWVVGHFTDVDLLKLLARCRSALRKGGLIVVKDNVIGQGEGAFKVDSEDSSMTRSLGYFRSLFNHGGVRVVHQTRQDGFPGELFPVYMFALE 317          
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Match: A0A1V9YYT0_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYT0_9STRA)

HSP 1 Score: 256 bits (654), Expect = 7.230e-82
Identity = 116/216 (53.70%), Postives = 156/216 (72.22%), Query Frame = 1
Query:    1 WYERAYNYWEDGQNCPLDDDGVLGGYGHISPTDIAGSKIFLDELKAMRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVGRDSDRTT-CVCVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAALKKGGLVVIKDNVVGEGEGAFKVDSEDSSMTRSLGYFRSLFKHGGLKVLHQQQQEGFPGEIFPVYMFAL 645
            WY +  +YWED  NCP D  GVLGGYG+ISP DI GS  FLD ++A+RP     +A DCG GIGRV KHLLL  F TVD++EQSPRLL+AAP+Y+G+D  R    +C+G+QDF P   SYDL W QWV  H  DVDF+  + RC+ AL+ GG++ IK+N++ +G   ++VD EDSS+TRS  Y++S+F+  GLK+L +++Q GFP E++PV  +AL
Sbjct:   54 WYTQGADYWEDEVNCPPDVGGVLGGYGYISPVDIEGSLSFLDRVQALRPEFTRSHAIDCGGGIGRVVKHLLLPHFQTVDLLEQSPRLLKAAPRYIGKDKSRVRQLLCMGMQDFDPAPMSYDLIWCQWVCPHLMDVDFITFLQRCQRALRPGGVICIKENIIVDGS-PYEVDEEDSSLTRSTAYYKSIFRQAGLKILTEERQTGFPEELYPVMSYAL 268          
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Match: A0A067BRJ5_SAPPC (Uncharacterized protein n=3 Tax=Saprolegnia TaxID=4769 RepID=A0A067BRJ5_SAPPC)

HSP 1 Score: 250 bits (638), Expect = 1.910e-79
Identity = 112/216 (51.85%), Postives = 156/216 (72.22%), Query Frame = 1
Query:    1 WYERAYNYWEDGQNCPLDDDGVLGGYGHISPTDIAGSKIFLDELKAMRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVGRDSDRT-TCVCVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAALKKGGLVVIKDNVVGEGEGAFKVDSEDSSMTRSLGYFRSLFKHGGLKVLHQQQQEGFPGEIFPVYMFAL 645
            WY +  +YWED +NCP D  GVLGGYG+ISP DI GS  FL  ++A+RP    + A DCG GIGRV KHLLL  F +VD++EQSPRLL+AAP+Y+G +  R  T +C+G+QDF P  NSYDL W QWV  H  D+DF+K + RC+ AL+ GG++ IK+N++ +G   +++D +DSS+TRS  Y++S+F+   L +L  ++QEGFP E++PV  +AL
Sbjct:   54 WYTQGADYWEDEENCPPDVGGVLGGYGYISPIDIEGSTAFLARVQALRPAFKRDRAIDCGGGIGRVVKHLLLPLFASVDLLEQSPRLLKAAPRYIGAEKHRVETLLCMGMQDFDPSPNSYDLIWCQWVCPHLMDLDFIKFLQRCQQALRPGGVICIKENIIVDGS-PYELDEDDSSVTRSAAYYKSIFRQANLTLLADERQEGFPEELYPVMTYAL 268          
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Match: K3X303_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X303_GLOUD)

HSP 1 Score: 249 bits (637), Expect = 7.720e-79
Identity = 118/219 (53.88%), Postives = 155/219 (70.78%), Query Frame = 1
Query:    1 WYERAYNYWEDGQNCPLDDDGVLGGYGHISPTDIAGSKIFLDELKAMRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVGRDSDRTTCV----CVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAALKKGGLVVIKDNVVGEGEGAFKVDSEDSSMTRSLGYFRSLFKHGGLKVLHQQQQEGFPGEIFPVYMFAL 645
            WY  A+++WED +NCP+ D+GVLGG+ H+SP DI GS+ FL  ++ +RP    + A DCGAGIGRV+K LLL  F  VD+VEQSPRLLQ+ PQYVGR S  T  +    C+GLQDF+P E  YDL WIQWV  H TDVDF+  + RC+ AL   G + +K+NVV  G   F++D EDSS+TRS  Y++SLFK  GL ++ ++ Q+ FP E++PV MFAL
Sbjct:   84 WYSSAHDFWEDEKNCPVTDNGVLGGFAHVSPVDIKGSERFLARVQKLRPGWERQLAVDCGAGIGRVSKFLLLPTFKQVDLVEQSPRLLQSVPQYVGRTSSDTKRIRNLYCMGLQDFYPEEQKYDLIWIQWVSSHLTDVDFVHFLKRCKQALAPNGWIGVKENVVLSGT-PFELDREDSSITRSAAYYKSLFKQAGLTIIVEELQQHFPRELYPVKMFAL 301          
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Match: A0A836CCK3_9STRA (AdoMet dependent proline di-methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CCK3_9STRA)

HSP 1 Score: 243 bits (621), Expect = 4.840e-77
Identity = 124/238 (52.10%), Postives = 161/238 (67.65%), Query Frame = 1
Query:    4 YERAYNYWEDGQNCPLDDDGVLGGYGHISPTDIAGSKIFLDELKAMRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVGRDSDRTTCVCVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAALKKGGLVVIKDNVVG---------------EGEG-------AFKVDSEDSSMTRSLGYFRSLFKHGGLKVLHQQQQEG-FPGEIFPVYMFALE 648
            + +AY+YWE     P   +GVLGGYG +SP DIAGS  FL ELK++RP LG E AADCGAGIGR+T+  LL  FD VD+VEQSP+LL+AAP+++G   D    +C+GLQDF PP ++YD+ W+QWVVGH TDVDF+K + RCR AL+  G++V+KDN                  E  G       AF +DS+DSS+ RS+ YFRSLFKH  + V+ Q+++   FP EIFPV+ FALE
Sbjct:   23 FPKAYDYWEA---SPSTIEGVLGGYGELSPIDIAGSTKFLAELKSLRPGLGCERAADCGAGIGRITRDFLLQHFDAVDMVEQSPKLLEAAPRFLGPLRDCVEYICMGLQDFCPPADTYDVIWVQWVVGHLTDVDFVKFLRRCRQALRPHGVLVLKDNCCSCDGSADAPDGTDNSCEDSGGNAGASSAFVLDSDDSSVARSVAYFRSLFKHADMDVVLQRREASIFPEEIFPVFYFALE 257          
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Match: A0A6G0WSU0_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WSU0_9STRA)

HSP 1 Score: 241 bits (614), Expect = 8.410e-76
Identity = 110/216 (50.93%), Postives = 146/216 (67.59%), Query Frame = 1
Query:    1 WYERAYNYWEDGQNCPLDDDGVLGGYGHISPTDIAGSKIFLDELKAMRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVGRDSDRT-TCVCVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAALKKGGLVVIKDNVVGEGEGAFKVDSEDSSMTRSLGYFRSLFKHGGLKVLHQQQQEGFPGEIFPVYMFAL 645
            WY     YWE+ +NCP +D GVLGGYGHISP D+ GS  FLD ++ +RP +    A DCG G+GRV  +LLL R+  VD +EQS RLLQ  P YVG +  R     C+G+QDF P   SYDL W QWV+GH TDVDF+  + RC+AAL  GG++ IK+N + EG   + VD +DSS+ RS  Y++S+F+  GL +L + +QEGFP E++PV  +AL
Sbjct:   55 WYTSGAEYWENEENCPPNDQGVLGGYGHISPVDVEGSSAFLDHIQTLRPAMQRNLAIDCGCGVGRVVNNLLLPRYTAVDCLEQSQRLLQTIPSYVGPEKARIRNLYCMGMQDFDPKPGSYDLIWCQWVLGHLTDVDFVAFLKRCQAALAPGGVICIKENAINEGV-PYYVDKDDSSLGRSSVYYKSIFRQAGLTLLAETKQEGFPDELYPVITYAL 269          
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Match: A0A485KWK6_9STRA (Aste57867_12822 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KWK6_9STRA)

HSP 1 Score: 239 bits (609), Expect = 9.580e-75
Identity = 111/216 (51.39%), Postives = 146/216 (67.59%), Query Frame = 1
Query:    1 WYERAYNYWEDGQNCPLDDDGVLGGYGHISPTDIAGSKIFLDELKAMRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVGRDSDRT-TCVCVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAALKKGGLVVIKDNVVGEGEGAFKVDSEDSSMTRSLGYFRSLFKHGGLKVLHQQQQEGFPGEIFPVYMFAL 645
            WY    +YWE  +NCP  D GVLGGYGHISP D+ GS  FLD L+  RP +    A DCG G+GRV K+LLL R+  VD +EQS RLL AAP Y+G +  R     C+G+QDF P   SYDL W QWV+GH TDVDF+  + RC+AAL  GG++ IK+N + EG   + VD +DSS+ RS  Y++S+F+  GL +L +++Q GFP E++PV  +AL
Sbjct:   77 WYTSGADYWEAEENCPPTDMGVLGGYGHISPIDVEGSAAFLDRLQKSRPTMQQNLAIDCGCGVGRVVKNLLLPRYTAVDCLEQSQRLLAAAPSYIGAEKARVRNLYCMGMQDFEPVARSYDLIWCQWVLGHLTDVDFVAFLKRCQAALAPGGVICIKENAINEGV-PYYVDKDDSSLGRSSAYYKSIFRQAGLTLLAEERQCGFPEELYPVITYAL 291          
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Match: W4G1H4_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4G1H4_9STRA)

HSP 1 Score: 238 bits (606), Expect = 1.500e-74
Identity = 108/218 (49.54%), Postives = 144/218 (66.06%), Query Frame = 1
Query:    1 WYERAYNYWEDGQNCPLDDDGVLGGYGHISPTDIAGSKIFLDELKAMRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVGRDSDRT---TCVCVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAALKKGGLVVIKDNVVGEGEGAFKVDSEDSSMTRSLGYFRSLFKHGGLKVLHQQQQEGFPGEIFPVYMFAL 645
            WY     YWED  NCP  DDGVLGGYG ISP D+ GS  FLD ++ +RP +    A DCG G+GRV KHLLL R+D+VD +EQS RLL   P Y+GR SD +      C+G+QDF P  ++YDL W QWV+GH TD DF+  + RC+ AL   G++ IK+N + EG   + VD +DSS+ RS  Y++S+F+  GL +L + +Q  FP E++PV  +AL
Sbjct:   56 WYTSGAKYWEDESNCPPTDDGVLGGYGRISPADVEGSASFLDRIQTLRPTMKRNLAIDCGCGVGRVVKHLLLPRYDSVDCLEQSQRLLNTVPSYIGRSSDTSRIRNLYCMGMQDFQPEPHAYDLIWCQWVLGHLTDSDFVAFLKRCQKALAPDGVICIKENAINEGV-PYYVDKDDSSLGRSSVYYKSIFRQAGLTLLAETEQSDFPDELYPVITYAL 272          
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Match: A0A8K1CPE5_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CPE5_PYTOL)

HSP 1 Score: 233 bits (595), Expect = 1.690e-72
Identity = 111/220 (50.45%), Postives = 148/220 (67.27%), Query Frame = 1
Query:    1 WYERAYNYWEDGQNCPLDDDGVLGGYGHISPTDIAGSKIFLDELKAMRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVGRD-----SDRTTCVCVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAALKKGGLVVIKDNVVGEGEGAFKVDSEDSSMTRSLGYFRSLFKHGGLKVLHQQQQEGFPGEIFPVYMFAL 645
            WY  A +YW+D + C LDD+GVLGG+ HISP D+  SK F+ +L   RP    +   DCGAGIGRVTK+LLL  F  VD++EQS RLL+  PQY+GRD     S      C+GLQDF P   SYDL WIQWV  H TDVDF+  + RC+A L   G + +K+NV+  G   +++D +DSSMTRS  YF+S+F+  GL+V+ ++ Q+ FP E++PV M+AL
Sbjct:   83 WYSSANDYWQDEEKCSLDDNGVLGGFAHISPADVHDSKEFIYKLALKRPQWKRDVVVDCGAGIGRVTKNLLLPLFQRVDLIEQSERLLRGVPQYIGRDDAAALSRVRNLYCMGLQDFTPASRSYDLVWIQWVSSHLTDVDFVDFLKRCKAGLAPHGWIAVKENVLLAGS-PYEIDRQDSSMTRSDVYFKSIFRQAGLEVIAEETQKNFPEELYPVKMYAL 301          
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Match: A0A5D6Y378_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6Y378_9STRA)

HSP 1 Score: 233 bits (595), Expect = 2.160e-72
Identity = 114/219 (52.05%), Postives = 151/219 (68.95%), Query Frame = 1
Query:    1 WYERAYNYWEDGQNCPLDDDGVLGGYGHISPTDIAGSKIFLDELKAMRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVGR---DSDRTTCV-CVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAALKKGGLVVIKDNVVGEGEGAFKVDSEDSSMTRSLGYFRSLFKHGGLKVLHQQQQEGFPGEIFPVYMFAL 645
            WY  A+ YWED +NCP+ D+GVLGG+ H+SP DI GS+ F   +  +RP    E A DCGAGIGRV+K LLL  F+ VD+VEQSPRLLQ+ PQYVGR   D +R   + C+GLQDF P   SYDL WIQWV  H TD DF++ + RC+ AL+  G + +K+N   +GE  +++D EDSS+T       SLFK  GLKV+ +++Q+ FP E++PV M+AL
Sbjct:   99 WYASAHAYWEDERNCPVSDNGVLGGFAHVSPADIQGSEAFFARVSKLRPAWRREVAVDCGAGIGRVSKFLLLPHFEHVDLVEQSPRLLQSVPQYVGRFNSDVERVRSLYCMGLQDFEPAPESYDLIWIQWVSSHLTDADFVRFLQRCKHALRPHGWIGVKENTFLDGE-PYELDKEDSSIT-------SLFKQAGLKVIAKERQQHFPQELYPVTMYAL 309          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8521.19860.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNP7_ECTSI2.390e-14286.57Caffeate O-Methyltransferase n=2 Tax=Ectocarpus Ta... [more]
A0A1V9YYT0_9STRA7.230e-8253.70Uncharacterized protein n=1 Tax=Achlya hypogyna Ta... [more]
A0A067BRJ5_SAPPC1.910e-7951.85Uncharacterized protein n=3 Tax=Saprolegnia TaxID=... [more]
K3X303_GLOUD7.720e-7953.88Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A836CCK3_9STRA4.840e-7752.10AdoMet dependent proline di-methyltransferase-doma... [more]
A0A6G0WSU0_9STRA8.410e-7650.93Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
A0A485KWK6_9STRA9.580e-7551.39Aste57867_12822 protein n=1 Tax=Aphanomyces stella... [more]
W4G1H4_9STRA1.500e-7449.54Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]
A0A8K1CPE5_PYTOL1.690e-7250.45Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6Y378_9STRA2.160e-7252.05Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8521contigM-pyrifera_M_contig8521:6193..8299 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score322.0
Seed ortholog evalue1.7e-85
Seed eggNOG ortholog2880.D7FNP7
Preferred nameNTMT1
KEGG koko:K14317,ko:K16219,ko:K19579
KEGG TC1.I.1
KEGG Pathwayko03013,ko05169,map03013,map05169
KEGG ModuleM00427
Hectar predicted targeting categoryother localisation
GOsGO:0000226,GO:0002181,GO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005737,GO:0005829,GO:0006325,GO:0006412,GO:0006464,GO:0006479,GO:0006480,GO:0006518,GO:0006807,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007059,GO:0008150,GO:0008152,GO:0008168,GO:0008213,GO:0008276,GO:0008757,GO:0009058,GO:0009059,GO:0009987,GO:0010467,GO:0016043,GO:0016569,GO:0016570,GO:0016571,GO:0016740,GO:0016741,GO:0018011,GO:0018012,GO:0018013,GO:0018016,GO:0018193,GO:0018194,GO:0018201,GO:0018208,GO:0018209,GO:0019538,GO:0022402,GO:0031365,GO:0031974,GO:0031981,GO:0032259,GO:0034641,GO:0034645,GO:0035568,GO:0035570,GO:0035572,GO:0035573,GO:0036211,GO:0042054,GO:0043043,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043412,GO:0043414,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044464,GO:0051276,GO:0070013,GO:0071704,GO:0071840,GO:0071885,GO:0071891,GO:0140096,GO:1901564,GO:1901566,GO:1901576
EggNOG free text desc.O-methyltransferase activity
EggNOG OGsKOG3178@1,KOG3178@2759
EC2.1.1.244,2.1.1.299
COG Functional cat.D
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko01000,ko03019
Exons3
Model size834
Cds size513
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8521.19860.1prot_M-pyrifera_M_contig8521.19860.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8521 6376..8161 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816760.6100636-UTR-M-pyrifera_M_contig8521:6192..63751622816760.6100636-UTR-M-pyrifera_M_contig8521:6192..6375Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8521 6193..6375 -
1692278162.4182088-UTR-M-pyrifera_M_contig8521:6192..63751692278162.4182088-UTR-M-pyrifera_M_contig8521:6192..6375Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8521 6193..6375 -
1622816760.65805-UTR-M-pyrifera_M_contig8521:8161..82991622816760.65805-UTR-M-pyrifera_M_contig8521:8161..8299Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8521 8162..8299 -
1692278162.4676342-UTR-M-pyrifera_M_contig8521:8161..82991692278162.4676342-UTR-M-pyrifera_M_contig8521:8161..8299Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8521 8162..8299 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816760.6232667-CDS-M-pyrifera_M_contig8521:6375..66961622816760.6232667-CDS-M-pyrifera_M_contig8521:6375..6696Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8521 6376..6696 -
1692278162.432667-CDS-M-pyrifera_M_contig8521:6375..66961692278162.432667-CDS-M-pyrifera_M_contig8521:6375..6696Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8521 6376..6696 -
1622816760.6366925-CDS-M-pyrifera_M_contig8521:7164..73221622816760.6366925-CDS-M-pyrifera_M_contig8521:7164..7322Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8521 7165..7322 -
1692278162.4455028-CDS-M-pyrifera_M_contig8521:7164..73221692278162.4455028-CDS-M-pyrifera_M_contig8521:7164..7322Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8521 7165..7322 -
1622816760.6473129-CDS-M-pyrifera_M_contig8521:8127..81611622816760.6473129-CDS-M-pyrifera_M_contig8521:8127..8161Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8521 8128..8161 -
1692278162.456801-CDS-M-pyrifera_M_contig8521:8127..81611692278162.456801-CDS-M-pyrifera_M_contig8521:8127..8161Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8521 8128..8161 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8521.19860.1

>prot_M-pyrifera_M_contig8521.19860.1 ID=prot_M-pyrifera_M_contig8521.19860.1|Name=mRNA_M-pyrifera_M_contig8521.19860.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp
MRPLLGDENAADCGAGIGRVTKHLLLDRFDTVDIVEQSPRLLQAAPQYVG
RDSDRTTCVCVGLQDFFPPENSYDLFWIQWVVGHFTDVDFLKLVNRCRAA
LKKGGLVVIKDNVVGEGEGAFKVDSEDSSMTRSLGYFRSLFKHGGLKVLH
QQQQEGFPGEIFPVYMFALE*
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mRNA from alignment at M-pyrifera_M_contig8521:6193..8299-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8521.19860.1 ID=mRNA_M-pyrifera_M_contig8521.19860.1|Name=mRNA_M-pyrifera_M_contig8521.19860.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=2107bp|location=Sequence derived from alignment at M-pyrifera_M_contig8521:6193..8299- (Macrocystis pyrifera P11B4 male)
TGGTATGAGCGCGCGTACAACTACTGGGAAGACGGCCAAAACTGCCCGCT CGACGACGATGGGGTGCTGGGCGGCTACGGGCACATTTCTCCAACCGACA TAGCCGGCTCGAAGATTTTTTTGGACGAGCTCAAGGCCATGAGACCACTT CTCGGCGACGAAAATGCGGCTGGTAAGAGATGCTGTACCCGCCTCCTGGG GCACTCGAACTCCCCCGCGCTCCCGGCGGCTGCTCCTTTTATGTATATAC ACCACTTTCCAGGCATTATGAAGACTCCCTTATGAGCGCTTTTCCTATGT TCTGGTTCTGTGTATGCAGTACAAAATCGAACCTAACCTCTGACGTCATG AAACCTTTCCACCTTTCGCCTTGACGCCATCCCTCCTCTGTGCGACCCAG TGCCGCTCCCGCAACTCACACGTCTTTTACTGCTTGCAACGATCTGCTCG ATTTTTTGGTCCAGCGGGGCACACGAAAAATATCTAGATAGACGGTTTTG TTGTCTATTGACCCTCACGAGAGTGCATGGATTTGATTTTTTTCTGTCGG AGCAGCGGGCCGGGCCCGGACGGCGCCCAGGCGCCTAATCTTTGTGCTGA TTCTGGTCGGTCGGTTGTGTAGCGTACGGCCGCTACCGAATGAACGATTG CGATTTGCTTGTCGACACCTGTGCTGTGTCTGCATTATGAGCTCGTTTGT GACCAGTTCCCCACTAGGTGTATGCTTTTACTGCTGCTGCTGCTGTCCAT ATTCGGTAATGGACCGTGTTGTTGATTATTTTTTGTTCTCTCAATTTCTT GCAATAACGCCAGCTGTAGGAAAGTGCGACTTACCACGTGATATACATCG AAGTATTGTTCCTGCTGGAAATGGTCTTGCTGACACCGACATCGGCCCGA TACGTACGTGGGCAATGTGTCCACTCATGACCACCCACTTTGTTGTTCGC GACGTGGTTTGTATGTTGGGCGTCCAGATTGCGGTGCGGGCATCGGCCGC GTAACGAAGCATCTGCTACTCGATCGATTCGACACTGTGGATATCGTGGA GCAGAGCCCGCGGCTGCTTCAAGCCGCGCCGCAGTACGTCGGGCGAGATA GCGATCGCACCACGTGCGTGTGCGTGGGTCTTCAGGTGAGGGTCTCCACA TTGTGCGCACGTTGCGGCTTGCTATTTACAGGCTGGGCGCAAGCAGTTCC GCCATTTGGCCGTAGTACCCATGCGGGCATCGCGCTTGTGCCGAAGACTG CTTCTACGTACTGACTGTAGGAGCAGCACTATGCGTCTGTGCTGGTGGCG TACCGCGCGATTGTTCGCGGAAACTGTAGGCAGGCAATGCGTTCGTCTGG CTGTTTTAAGGCGGTCATGGAGGTACCGAGGCCAAAACTGTGCTGGTATG CTTGACCCCGAAGGTGCTACTACTAGGCACTACAGTATTTTTTTTGTGTG AACACCTGGTTGAGGTTGTCTTGTATTTTCTCTCTTTGCGATCAGTCCAT AGCGCCGGAGTAGCCCTACCACAAGACCGGCGCCGCTTCCACTGCCCAGC ACTTGATGTTAATTTTGTGTGCACTGCCCCGACTCGCTCGATCATGATTG TAGGACTTTTTCCCGCCAGAAAACAGCTACGACCTCTTCTGGATCCAGTG GGTGGTGGGGCACTTCACCGACGTTGACTTCCTGAAGCTGGTCAACCGTT GCCGGGCGGCGCTGAAGAAGGGCGGCCTCGTTGTCATCAAGGACAACGTT GTAGGGGAGGGCGAGGGCGCATTCAAAGTGGATAGCGAGGACAGCAGTAT GACTCGATCGCTCGGGTACTTCAGGAGCTTGTTCAAACACGGGGGGTTGA AAGTGCTGCATCAGCAGCAACAAGAAGGGTTTCCAGGAGAGATATTTCCC GTGTACATGTTTGCACTGGAGTGAGAGGGTATTAGTAGTCGGATCGATTG TGGATGGATGGAAAAGCTTGTGGAGAAGCTGGGGGACTGGCAACGGGTCT AACTCAAGTAACCGTATAAAAATGTTCCAGCTCATGCGAGTGTTTCGACT TGCGTGCGACGGACCGTCGTGCGATGTGGAAGCACCGCCACAAAAAGTTC ACCTGGC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8521:6193..8299-

>mRNA_M-pyrifera_M_contig8521.19860.1 ID=mRNA_M-pyrifera_M_contig8521.19860.1|Name=mRNA_M-pyrifera_M_contig8521.19860.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1026bp|location=Sequence derived from alignment at M-pyrifera_M_contig8521:6193..8299- (Macrocystis pyrifera P11B4 male)
ATGAGACCACTTCTCGGCGACGAAAATGCGGCTGATGAGACCACTTCTCG
GCGACGAAAATGCGGCTGATTGCGGTGCGGGCATCGGCCGCGTAACGAAG
CATCTGCTACTCGATCGATTCGACACTGTGGATATCGTGGAGCAGAGCCC
GCGGCTGCTTCAAGCCGCGCCGCAGTACGTCGGGCGAGATAGCGATCGCA
CCACGTGCGTGTGCGTGGGTCTTCAGATTGCGGTGCGGGCATCGGCCGCG
TAACGAAGCATCTGCTACTCGATCGATTCGACACTGTGGATATCGTGGAG
CAGAGCCCGCGGCTGCTTCAAGCCGCGCCGCAGTACGTCGGGCGAGATAG
CGATCGCACCACGTGCGTGTGCGTGGGTCTTCAGGACTTTTTCCCGCCAG
AAAACAGCTACGACCTCTTCTGGATCCAGTGGGTGGTGGGGCACTTCACC
GACGTTGACTTCCTGAAGCTGGTCAACCGTTGCCGGGCGGCGCTGAAGAA
GGGCGGCCTCGTTGTCATCAAGGACAACGTTGTAGGGGAGGGCGAGGGCG
CATTCAAAGTGGATAGCGAGGACAGCAGTATGACTCGATCGCTCGGGTAC
TTCAGGAGCTTGTTCAAACACGGGGGGTTGAAAGTGCTGCATCAGCAGCA
ACAAGAAGGGTTTCCAGGAGAGATATTTCCCGTGTACATGTTTGCACTGG
AGTGAGACTTTTTCCCGCCAGAAAACAGCTACGACCTCTTCTGGATCCAG
TGGGTGGTGGGGCACTTCACCGACGTTGACTTCCTGAAGCTGGTCAACCG
TTGCCGGGCGGCGCTGAAGAAGGGCGGCCTCGTTGTCATCAAGGACAACG
TTGTAGGGGAGGGCGAGGGCGCATTCAAAGTGGATAGCGAGGACAGCAGT
ATGACTCGATCGCTCGGGTACTTCAGGAGCTTGTTCAAACACGGGGGGTT
GAAAGTGCTGCATCAGCAGCAACAAGAAGGGTTTCCAGGAGAGATATTTC
CCGTGTACATGTTTGCACTGGAGTGA
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