prot_M-pyrifera_M_contig8518.19855.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8518.19855.1
Unique Nameprot_M-pyrifera_M_contig8518.19855.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length345
Homology
BLAST of mRNA_M-pyrifera_M_contig8518.19855.1 vs. uniprot
Match: D7FHY1_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FHY1_ECTSI)

HSP 1 Score: 449 bits (1155), Expect = 5.870e-156
Identity = 245/346 (70.81%), Postives = 269/346 (77.75%), Query Frame = 0
Query:    1 MAGRSSRKGRRGTGNERIQALVEQKLSEGLQYEALQLYRGVVSRKSARGDDSTALAMAEQGICVLLKAGYADSATELGNVLVGILSDHELTPTEERVDAIKRVSTMYDEAKRLAVLAEEDRKXXXXXXXXXXXXXXXXXXXXXXXANVVNGKINSNATRGMPSVGTLQGRFLKLAVAWTAARGQRFSGDPVICALLGRCLWNEGDTERGMKYLVLGERPQELCDLIVQDVPEEEARDLKAAKGVLQFASKASLRDANALLGSYRSKQQNKP--KGLLEFCVLLLKTCEYDAAPVFQKLLDTYRADLSKDEALFGYVETIASTYFNLRLRPPSMLDNIMGMFGGMPK 344
            MAGRSSR G  G  NERIQ LVEQKL EGLQYEALQLYRGVVSRKSARG+D+ AL +AEQGI VLL  GYADSATELGNVLVGIL+DHEL  TEER++  +RV+  Y++AKR AVLAEEDR+                         V  GK    A RGM SVG LQGRFLKLAVAWTAARGQR SGDP +C LLGRCLWNEGD ERG +YLVLGERPQELCDLI+QDV +  AR+L  AKGVLQFASKASLRDANALL +Y+++   K   KG+L FC +LLKTCEYDA PVFQKLLD Y+ADLSKDEALFG VE+IA TYFNLRLRPPSMLDNIMGM GGMPK
Sbjct:    1 MAGRSSRSG--GNSNERIQLLVEQKLGEGLQYEALQLYRGVVSRKSARGNDNAALTIAEQGIGVLLARGYADSATELGNVLVGILNDHELPVTEERLELFRRVNAKYEDAKRAAVLAEEDRRTAAQEGQGGV-------------GEVEEGK---EAGRGMYSVGVLQGRFLKLAVAWTAARGQRLSGDPGLCGLLGRCLWNEGDLERGTRYLVLGERPQELCDLILQDVSDANARELAVAKGVLQFASKASLRDANALLAAYKTQTGGKQPTKGVLGFCAMLLKTCEYDATPVFQKLLDAYQADLSKDEALFGSVESIAMTYFNLRLRPPSMLDNIMGMLGGMPK 328          
BLAST of mRNA_M-pyrifera_M_contig8518.19855.1 vs. uniprot
Match: A0A835ZB05_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZB05_9STRA)

HSP 1 Score: 186 bits (472), Expect = 4.520e-53
Identity = 134/343 (39.07%), Postives = 184/343 (53.64%), Query Frame = 0
Query:    1 MAGRSSRKGRRGTGN-ERIQALVEQKLSEGLQYEALQLYRGVVSRKSARGDDSTALAMAEQGICVLLKAGYADSATELGNVLVGILSDHELTPTEERVDAIKRVSTMYDEAKRLAVLAEEDRKXXXXXXXXXXXXXXXXXXXXXXXANVVNGKINSNATRGMPSVGTLQGRFLKLAVAWTAARGQRFSGDPVICALLGRCLWNEGDTERGMKYLVLGERPQELCDLIVQDVPEEEARDLKAAKGVLQFASKASLRDANALLGSYRSKQ--QNKPKGLLEFCVLLLKTCEYDAAPVFQKLLDTYRADLSKDEALFGYVETIASTYFNLRLRPPSMLDNIMGMFG 340
            +AGRS+R  R+G G  ER++A+VE+KL  GL+YEALQLYRG  +RK+ARGD  +A AMAE G  VL++ G+ADSA+EL   LV I  ++    T+ER+D I+R+  +Y E                                    A  V   + S           LQ +FLK AVAWTAA G R +GD  + AL GRCL+  G+ E G   +V GE+P EL  L++               GVL F +  +LRDANA   ++ +    +    G  +F  LL  TCE DAAP+FQ+L +  RA  S D A+  ++  I   +F++ L PPSMLD+I+ M G
Sbjct:    5 LAGRSTR--RQGNGAAERVKAMVEEKLDAGLEYEALQLYRGQAARKAARGDFDSAAAMAETGAQVLMQRGFADSASELSRQLVEIYKENGCDVTQERLDRIQRLDALYQEVANKG----------------PGELKGKGSEAGIAQARQVRHPVQSGFE--------LQAKFLKAAVAWTAAAGPRPAGDAALNALPGRCLFAMGNAEAGTSRMVAGEQPIELRLLMM---------------GVLHFLALGNLRDANAQRAAWEAAAAPERARGGAQQFVRLLCATCERDAAPLFQRLAEAMRA--SGDPAVEKHLAQIGRVFFSI-LPPPSMLDSILKMMG 303          
BLAST of mRNA_M-pyrifera_M_contig8518.19855.1 vs. uniprot
Match: D7G1P9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1P9_ECTSI)

HSP 1 Score: 140 bits (354), Expect = 3.450e-37
Identity = 69/103 (66.99%), Postives = 79/103 (76.70%), Query Frame = 0
Query:  168 QGRFLKLAVAWTAARGQRFSGDPVICALLGRCLWNEGDTERGMKYLVLGERPQELCDLIVQDVPEEEARDLKAAKGVLQFASKASLRDANALLGSYRSKQQNK 270
            QGRFLKLAVAWT ARGQR   D  +C L+GRCLWNEG+ ERG +Y VLGERPQELCDLI+QDV +  AR L   KGVLQFA K SLRDANALL + + + + K
Sbjct:   10 QGRFLKLAVAWTTARGQRLRDDSGLCGLVGRCLWNEGELERGTRYHVLGERPQELCDLILQDVSDANARKLAVGKGVLQFARKRSLRDANALLAANKMRAEIK 112          
BLAST of mRNA_M-pyrifera_M_contig8518.19855.1 vs. uniprot
Match: A0A060TD77_BLAAD (ARAD1D48708p n=1 Tax=Blastobotrys adeninivorans TaxID=409370 RepID=A0A060TD77_BLAAD)

HSP 1 Score: 58.5 bits (140), Expect = 4.550e-6
Identity = 53/184 (28.80%), Postives = 81/184 (44.02%), Query Frame = 0
Query:  178 WTAARGQRFSGDPVICALLGRCLWNEGDTERGMKYLVLGER--PQELCDLIV---QDVPEEEARDLKAAKGVLQFASKASLRDANALLGSYRSK----------QQN------KPKGLLEFCVLLLKTCEYDAAPVFQKLLDTYRADLSKDEALFGYVETIASTYFNLRLRPP---SMLDNIMG 337
            W +  GQ   GDP +  +LG       +     KYL+LG R  P+ L  L+    Q+        L A++GVL +    ++RD+ ALL  + S+          QQ       K   L+ F  LL+ +C+Y  A +F +L   Y   L   +A    +  I   YF +   PP   +ML ++MG
Sbjct:  113 WASQYGQYKYGDPELNHILGSIFARADEAYEAEKYLLLGTRDSPKVLAKLLFEWSQEDSNSHTLPLYASRGVLGYLCIGNIRDSKALLDEFISQCPSEWYTTVEQQGEKASLFKDYPLMTFLQLLVLSCQYKNADMFNRLKTRYSDKLQDVQAFNVPLARIGRDYFGIE--PPRQHNMLQDLMG 294          
BLAST of mRNA_M-pyrifera_M_contig8518.19855.1 vs. uniprot
Match: A0A7S1BUX6_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BUX6_9STRA)

HSP 1 Score: 55.8 bits (133), Expect = 2.610e-5
Identity = 47/190 (24.74%), Postives = 78/190 (41.05%), Query Frame = 0
Query:  169 GRFLKLAVAWTAARGQRFSGDPVICALLGRCLWNEGDTERGMKYLVLGERPQELCDLIVQDVPEEEA---------RDLKAAKGVLQFASKASLRDANALLGSYRSKQQNKPKGL-------------LEFCVLLLKTCEYDAAPVFQKLLDTYRAD---LSKDEALFGYVETIASTYFNLRLRPPSMLD 333
            G FL+ AV +T   G    GDP + A L R  ++ G  + G+ + V  E PQE+   + +DV   E           D+     V  F +  ++RDA   + +Y  +       L             + FC  L+  CE +    F  L    +     + +++ L  Y+  I   YFN++  PP+M+ 
Sbjct:   49 GAFLRDAVRYTDLLGSVRHGDPRVHAALSRAAFDGGRWQEGVTHGVYAEEPQEVARRLQKDVGLREEGEGPAGDRPADVALTVAVTMFLALENMRDATQCVRTYLEEDDRPTNKLTSSFLTSKSNTNYVTFCTSLISICETENKQWFHWLTGGSQCGKKLMDQNKGLVPYITKIGKVYFNVQ-PPPTMMS 237          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8518.19855.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D7FHY1_ECTSI5.870e-15670.81Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZB05_9STRA4.520e-5339.07Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
D7G1P9_ECTSI3.450e-3766.99Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A060TD77_BLAAD4.550e-628.80ARAD1D48708p n=1 Tax=Blastobotrys adeninivorans Ta... [more]
A0A7S1BUX6_9STRA2.610e-524.74Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 107..135
NoneNo IPR availablePANTHERPTHR12875:SF0GOLGI TO ER TRAFFIC PROTEIN 4 HOMOLOGcoord: 5..339
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 9..121
e-value: 1.3E-11
score: 46.3
coord: 141..341
e-value: 5.7E-29
score: 103.4
IPR007317Golgi to ER traffic protein 4PFAMPF04190DUF410coord: 52..341
e-value: 1.6E-38
score: 133.0
IPR007317Golgi to ER traffic protein 4PANTHERPTHR12875UNCHARACTERIZEDcoord: 5..339

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8518contigM-pyrifera_M_contig8518:715..8056 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8518.19855.1mRNA_M-pyrifera_M_contig8518.19855.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8518 715..8503 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8518.19855.1 ID=prot_M-pyrifera_M_contig8518.19855.1|Name=mRNA_M-pyrifera_M_contig8518.19855.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=345bp
MAGRSSRKGRRGTGNERIQALVEQKLSEGLQYEALQLYRGVVSRKSARGD
DSTALAMAEQGICVLLKAGYADSATELGNVLVGILSDHELTPTEERVDAI
KRVSTMYDEAKRLAVLAEEDRKAQLEEEGRGQEEQERGGGDAEKQANVVN
GKINSNATRGMPSVGTLQGRFLKLAVAWTAARGQRFSGDPVICALLGRCL
WNEGDTERGMKYLVLGERPQELCDLIVQDVPEEEARDLKAAKGVLQFASK
ASLRDANALLGSYRSKQQNKPKGLLEFCVLLLKTCEYDAAPVFQKLLDTY
RADLSKDEALFGYVETIASTYFNLRLRPPSMLDNIMGMFGGMPK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011990TPR-like_helical_dom_sf
IPR007317GET4