mRNA_M-pyrifera_M_contig85177.19854.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig85177.19854.1
Unique NamemRNA_M-pyrifera_M_contig85177.19854.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Match: A0A2E7XK83_9GAMM (Alginate_exp domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A2E7XK83_9GAMM)

HSP 1 Score: 321 bits (823), Expect = 1.390e-104
Identity = 150/289 (51.90%), Postives = 205/289 (70.93%), Query Frame = 1
Query:    1 RSTEGRELRAFFTLPVAREPNTFAELRDNDIEFDQEDSDVTFWGLVASEAWRARDYVEVFYFGLDEDDSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFETAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFASGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKPATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDVAPGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTYAYTQI 867
            R   G + R F+TLPV R P    +LRDN+ + D+ D++V FWG+  +      D  E FYFG+DEDDS  R TRNRD++T+G R+    +   FD++ E+AFQFGESR S+++T   DLDH A+F H E+GY+F +PWQ R++AQYD+ASGD +P D D ER+ +L+GARRFDFGPTGIYGPF+R NL T G R+Q+KP    SGFI+ RAYWLASD+D W T G+ D  G + +++G Q+E+  R+++ PGN+RLE G AHLFA  F +D P + ++GD TY Y+Q+
Sbjct:  172 RGEGGDQWRVFYTLPVYRLPTFAGDLRDNERKLDEVDTEVKFWGIHYATDLSWGDRGEFFYFGIDEDDSPGRVTRNRDLATIGFRMTHPTQVAQFDHQIESAFQFGESRLSSSSTVVGDLDHTAYFLHLELGYTFNSPWQARLIAQYDYASGDGDPLDSDNERFESLFGARRFDFGPTGIYGPFSRTNLKTFGFRLQLKPGKGFSGFISHRAYWLASDKDTWATTGLQDVDGDSGTYLGQQIEVRGRWNLRPGNIRLEAGIAHLFADEFRDDVPTSNRQGDSTYVYSQV 460          
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Match: A0A7Y3D985_9DELT (Alginate export family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3D985_9DELT)

HSP 1 Score: 318 bits (816), Expect = 3.980e-104
Identity = 153/286 (53.50%), Postives = 197/286 (68.88%), Query Frame = 1
Query:   10 EGRELRAFFTLPVAREPNTFAELRDNDIEFDQEDSDVTFWGLVASEAWRARDYVEVFYFGLDEDDSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFETAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFASGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKPATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDVAPGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTYAYTQI 867
            +G  LRAF+ LP+ R P     L D+D+  D+E  D+  WGL    A    D VE+   GL E+ +    TRNRD+ + GLRL R P  G FDY+ E+  Q G SR+   AT++ DLDH AHFHH EVGYSF APW PR+  QYD ASGD++P D   ER+ TL+G+RRFDFGPT IYG FAR NLSTPGLR+QVKP  + + F+A R +WLA  RDAWTT+G+ DP+G +  ++G Q++  +RYDV PGNVRLE GFAHLF GGF++ APN+ ++GD TY Y ++
Sbjct:  133 DGHSLRAFYLLPLRRRPADRPSLDDDDVRLDEESFDIQLWGLHGGFALPWGDRVELQLIGLHEE-AGAGGTRNRDLYSPGLRLLRKPARGRFDYQLESVVQLGRSRAG--ATSTVDLDHRAHFHHVEVGYSFDAPWSPRVALQYDHASGDEDPNDRKNERFDTLFGSRRFDFGPTSIYGAFARGNLSTPGLRIQVKPGDRTTSFVALRGFWLAERRDAWTTSGVRDPAGRSGRYVGSQIDFRLRYDVVPGNVRLETGFAHLFDGGFVKSAPNSNRQGDTTYGYLEL 415          
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Match: A0A521RAW3_9GAMM (Alginate_exp domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RAW3_9GAMM)

HSP 1 Score: 312 bits (800), Expect = 2.610e-100
Identity = 156/283 (55.12%), Postives = 204/283 (72.08%), Query Frame = 1
Query:   25 RAFFTLPVAREPNTFAELRDNDIEFDQEDSDVTFWGLVASEA---WRARDYVEVFYFGLDEDDSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFETAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFASGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKPATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDVAPGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTYAYTQ 864
            RAF+TLPV R  +      DND EFD++D+DV  WGL  + A   W   D  EV+  GL EDDS+  QT NRDI T+G+RLYR P AG FDY+ E+ +QFGESR +TAA +  DLDHFAHF HAEVGY+F +PW P+++ QYD+ASGDD  GDGD  R+ TL+GARRF++GPT ++G F R NLSTPG+R+ +KPA KLS F+A R +WLA   DAWTTAGI +P+G+++SF+G QVE S+R+D+ P +V++E G A+L AG  M  A     +GD +Y Y+Q
Sbjct:  249 RAFYTLPVQRLVD--GSPLDNDPEFDRQDTDVQLWGLYYAPARMPWG--DPGEVYLLGLHEDDSADLQTSNRDIETMGIRLYRQPAAGRFDYQLESIYQFGESRDTTAAMDVTDLDHFAHFQHAEVGYTFASPWSPQLLLQYDYASGDDRGGDGDNNRFDTLFGARRFEYGPTSLWGAFGRANLSTPGVRLNLKPAEKLSAFLALRGFWLADSDDAWTTAGIRNPAGSSESFVGAQVEASLRWDIIPKSVQVELGGAYLSAGDLMTGA----NKGDASYFYSQ 523          
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Match: A0A432RNU7_9GAMM (Alginate_exp domain-containing protein n=1 Tax=Methylococcus sp. TaxID=39769 RepID=A0A432RNU7_9GAMM)

HSP 1 Score: 310 bits (794), Expect = 3.690e-100
Identity = 150/285 (52.63%), Postives = 198/285 (69.47%), Query Frame = 1
Query:   13 GRELRAFFTLPVAREPNTFAELRDNDIEFDQEDSDVTFWGLVASEAWRARD-YVEVFYFGLDEDDSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFETAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFASGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKPATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDVAPGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTYAYTQ 864
            G + RAF+ LPV   P   + +  N+++ D+ED +  FWG+ A     A D   E++  GLDE+D+  R TRNR+I T G R YR  +AG  DY+ E+  Q+G+SR+ST +T   DL+H A+F H E+GY+F   W PR++ Q+D+ASGDD+P DG   R+ TL+GARRFDFGPT IYG FAR NL +PG+++QVKPA  +SGF  +RA WLASDRD+WTTA +VD SG + SF+GHQVE+ VR+D APGN+RLE G  HLF G F  +AP+A   GD TY Y Q
Sbjct:  181 GIQARAFYVLPVVSTPGDSSSMNQNEVDIDEEDINFRFWGIQAKMDNTACDGAAELYLLGLDENDTDERATRNREIYTGGFRFYRPRKAGQLDYQVESMIQWGQSRTSTISTT--DLNHLAYFQHTELGYTFEHAWNPRLLVQFDYASGDDDPNDGKNNRFDTLFGARRFDFGPTSIYGAFARSNLISPGIKLQVKPADTVSGFAGYRANWLASDRDSWTTANVVDASGLSGSFLGHQVEVRVRWDPAPGNLRLETGMVHLFLGEFGRNAPDAVAEGDSTYYYVQ 463          
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Match: A0A358JNK2_9PROT (Alginate export family protein n=1 Tax=Nitrosomonas sp. TaxID=42353 RepID=A0A358JNK2_9PROT)

HSP 1 Score: 304 bits (779), Expect = 5.300e-98
Identity = 145/281 (51.60%), Postives = 192/281 (68.33%), Query Frame = 1
Query:   22 LRAFFTLPVAREPNTFAELRDNDIEFDQEDSDVTFWGLVASEAWRARDYVEVFYFGLDEDDSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFETAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFASGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKPATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDVAPGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTYAYTQ 864
            LR F+TLPV R P+T  +L  N+I FD+E  D+  WG+ A+  +      E+F FGL E D+S R T+NR + T G RL+R P +   DYEFE+AFQ G+S +S A   +R LDHFAHFHH  VGY+F+  W PR+   YDFASGD NP DG   R+ TLYGARRFDFGPTGIYG  AR N+  PG+R+ +KP  +L+  + +R  WLASDRDAW   G+ DP+G + SF+G Q++  +++ + PGN+ +E G+ HLF+G FM +APNA  RGD+ Y YTQ
Sbjct:  177 LRGFWTLPVVRLPDTPDQLLHNNIVFDEEGFDLQLWGIFAANNFAKSGRGELFIFGLHEQDTSNRLTQNRQLYTPGFRLFRTPASAGIDYEFESAFQIGKSHASPAT--ARPLDHFAHFHHLTVGYTFSTIWTPRMAVLYDFASGDKNPDDGKNGRFDTLYGARRFDFGPTGIYGALARANMHAPGIRLNLKPHNRLAASMDYRMLWLASDRDAWGITGVRDPAGRSGSFVGSQLDAQIQWQLLPGNMTVEAGYTHLFSGEFMRNAPNAGHRGDINYFYTQ 455          
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Match: A0A1I3Z3B9_9PROT (Alginate export n=2 Tax=Nitrosomonas aestuarii TaxID=52441 RepID=A0A1I3Z3B9_9PROT)

HSP 1 Score: 302 bits (774), Expect = 3.010e-97
Identity = 143/282 (50.71%), Postives = 190/282 (67.38%), Query Frame = 1
Query:   22 LRAFFTLPVAREPNTFAELRDNDIEFDQEDSDVTFWGLVASEAWRARDYVEVFYFGLDEDDSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFETAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFASGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKPATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDVAPGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTYAYTQI 867
            LR F+ LPV R P+T  +L  N+I FD+E  D+  WG+ A+  +      E+F FGL E D+S R T+NR + T G RL+R P +   DYEFE+AFQ G+S +S  A   R LDHFAHFHH   GY+F+  W PRI   YDFASGD+NP DG+  R+ TLY ARRFDFGPTGIYG  AR N+  PG+R+ +KP  +L+  + +RA WLAS RDAW   G+ DP G + SF+G Q++  +++ + PGN+ +E G+ HLF+G F+ +APNA  RGD+ Y YTQI
Sbjct:  177 LRGFWALPVVRLPDTADQLFHNNIVFDEESFDLQLWGIFAANNFAKFGRGELFIFGLHEQDTSNRLTQNRQLFTPGFRLFRTPASASIDYEFESAFQMGQSHTSPVAP--RTLDHFAHFHHLTAGYTFSTAWTPRIAVLYDFASGDNNPDDGNNGRFDTLYSARRFDFGPTGIYGALARTNMHAPGMRLNLKPHNRLTASMDYRALWLASSRDAWGFTGVRDPDGRSGSFVGSQLDAQIQWQLLPGNIAIEAGYTHLFSGKFIHNAPNAGHRGDINYFYTQI 456          
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Match: A0A7C8DGN9_9DELT (Alginate_exp domain-containing protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7C8DGN9_9DELT)

HSP 1 Score: 296 bits (758), Expect = 1.460e-94
Identity = 143/288 (49.65%), Postives = 194/288 (67.36%), Query Frame = 1
Query:   13 GRELRAFFTLPVAREPNTFA--ELRDNDIEFDQEDSDVTFWGLVASEAWRARDYVEVFYFGLDED-DSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFETAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFASGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKPATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDVAPGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTYAYTQI 867
            G ELR F+TLPV R+P      EL+DN ++FD ED D+ FWGL A          E F+FGL E+ +     T+ RDI T G R++  P    FDY FETA QFG +R S   T+ R  DHFAHFHH E GY+F   W PR+  QYD+A GD +P DGD  R+ TLYGARRFDFGPTGIYGPFAR NL+TPG+R+Q+KP+  ++ F+++R+++LA  +D W  +G+ D  G +  ++G Q EM +R+++ PGN++ E G+AH+F G F++DAPN+ + GD  Y YTQ+
Sbjct:  193 GTELRGFWTLPVIRKPGNDRPEELKDNKVKFDDEDIDLQFWGLFAGLDLPRVGRGEFFFFGLHENGELGGAPTKKRDIYTPGFRVFEKPAPSQFDYVFETALQFGRARESKG-TDPRS-DHFAHFHHLEFGYTFDVRWSPRVAFQYDYAMGDQSPSDGDSGRFDTLYGARRFDFGPTGIYGPFARNNLNTPGIRLQLKPSKTVTSFLSFRSFFLAESKDTWVKSGVRDADGNSGDYLGSQFEMRLRWNILPGNLKFEAGYAHVFDGEFIQDAPNSSRPGDFNYVYTQM 478          
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Match: A4BNK9_9GAMM (Alginate_exp domain-containing protein n=2 Tax=Nitrococcus mobilis TaxID=35797 RepID=A4BNK9_9GAMM)

HSP 1 Score: 292 bits (747), Expect = 4.410e-93
Identity = 146/285 (51.23%), Postives = 192/285 (67.37%), Query Frame = 1
Query:   13 GRELRAFFTLPVAREPNTFAELRDNDIEFDQEDSDVTFWGL-VASEAWRARDYVEVFYFGLDEDDSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFETAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFASGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKPATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDVAPGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTYAYTQ 864
            G +L+ F+TLPV R P     L DNDI  D E   V FW + +  E        E + FGL EDD S   T NR + T G+RL+  P  G +D+E E A Q G+SRS+T++ ++ DLDH A F HA + ++F APW PR+V QYDFASGD +P DG+  R+ TL+GARR++FGPTGIYG  AR N+++PG R+++KP+  L+GF+ +RA WLASDRDA TTA + DP GA+ SF+GHQ+E  VR DV PGN+ +E G A+LF G F++ APNA   GD  Y YTQ
Sbjct:  179 GTQLQTFYTLPVHRRPTDRDRLDDNDIVTDTESFKVRFWAVDLRQENLFGGATGEAYVFGLHEDDGSDVPTANRRLLTPGVRLFSAPAKGAWDFEVEAAGQVGKSRSTTSSADTTDLDHRAGFVHAHLAHTFDAPWSPRLVLQYDFASGDGDPNDGENNRFDTLFGARRWEFGPTGIYGALARSNINSPGTRIEIKPSPNLNGFVGYRAVWLASDRDALTTAEVRDPGGASGSFVGHQIEARVRADVLPGNLGMEFGGAYLFDGEFLKKAPNAAGNGDTAYFYTQ 463          
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Match: A0A382EPU6_9ZZZZ (Alginate_exp domain-containing protein (Fragment) n=1 Tax=marine metagenome TaxID=408172 RepID=A0A382EPU6_9ZZZZ)

HSP 1 Score: 290 bits (743), Expect = 1.110e-92
Identity = 139/285 (48.77%), Postives = 192/285 (67.37%), Query Frame = 1
Query:    1 RSTEGRELRAFFTLPVAREPNTFAELRDNDIEFDQEDSDVTFWGLVASEAWRARDYV-EVFYFGLDEDDSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFETAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFASGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKPATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDVAPGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTY 852
            +S+ G ++RAF+ LPV R P+    +  N+IE D+ED D  FWG+    +    +   + + F L E D++TR TRNR++ T GLRL+R P  GH ++EFE+ FQ G SR+S AAT+  DLDHFA  HH  +GY+   P   R+V Q+D+ASGD +P DG   RY TL+GARRF+FGPTGIYG FAR NL +PG R+   P  +++   A R YWLAS +DAWTT G+ D +G + S++G+Q E+ +R+D  PGN+RLE G A+L AGGF+++APN    G+ TY
Sbjct:  168 KSSSGHQIRAFYVLPVTRLPSARVRVVKNEIETDKEDFDRQFWGMFGERSCLFSNVTGQGYIFSLFEKDNATRNTRNRNLITAGLRLFRRPEKGHVEFEFESVFQTGRSRASAAATDVTDLDHFAFLHHLLLGYTLDIPSALRLVVQFDYASGDSDPADGKNNRYDTLFGARRFEFGPTGIYGAFARSNLVSPGFRIMFNPKQRVNVMAAHRIYWLASSKDAWTTGGVRDVTGNSGSYLGNQQEIRIRWDALPGNLRLESGVAYLIAGGFLKNAPNTSGEGNATY 452          
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Match: A0A7Y3H098_9DELT (Alginate export family protein n=1 Tax=Myxococcales bacterium TaxID=2026763 RepID=A0A7Y3H098_9DELT)

HSP 1 Score: 289 bits (740), Expect = 5.120e-92
Identity = 143/288 (49.65%), Postives = 189/288 (65.62%), Query Frame = 1
Query:    1 RSTEGRELRAFFTLPVAREPNTFAELRDNDIEFDQEDSDVTFWGLVASEAWRARDYVEVFYFGLDEDDSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFETAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFASGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKPATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDVAPGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTYAYTQ 864
            ++  G +LR F+T+P+ R P     L  N ++ D+E  D  FWGL  S         EVF  GL E D S R+TR R + T G RL+R P  G +D+ +E+A Q G SR+ST  T  R L H AHFHH EVG S  APW PR+  +YDFASGD++PGD    R+ TL+GARRFD+GPTGIYGPFAR NL +PGLR++++P+  L+ F+A R++WLA  RDAWTTAG+ D  G++   +G Q E+  R+DV PGN+R+E G+A LF G F+  AP +   GD+ Y YTQ
Sbjct:  181 KAPSGSQLRGFWTMPLRRRPTDRRRLEGNRVQNDEESLDQQFWGLFGSTDTPIG-RAEVFLLGLHERDESDRRTRKRQLYTPGFRLFRAPAEGRWDFAWESAVQLGRSRAST--TGER-LTHIAHFHHFEVGRSLAAPWSPRLAVEYDFASGDEDPGDSQNNRFDTLFGARRFDWGPTGIYGPFARSNLHSPGLRLKLRPSRTLTSFLALRSFWLAERRDAWTTAGLRDTQGSSGRHLGTQFEVRARWDVLPGNLRMEAGYARLFDGEFVRSAPGSNDPGDIDYFYTQ 464          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85177.19854.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7XK83_9GAMM1.390e-10451.90Alginate_exp domain-containing protein n=1 Tax=Gam... [more]
A0A7Y3D985_9DELT3.980e-10453.50Alginate export family protein n=1 Tax=Myxococcale... [more]
A0A521RAW3_9GAMM2.610e-10055.12Alginate_exp domain-containing protein n=1 Tax=Gam... [more]
A0A432RNU7_9GAMM3.690e-10052.63Alginate_exp domain-containing protein n=1 Tax=Met... [more]
A0A358JNK2_9PROT5.300e-9851.60Alginate export family protein n=1 Tax=Nitrosomona... [more]
A0A1I3Z3B9_9PROT3.010e-9750.71Alginate export n=2 Tax=Nitrosomonas aestuarii Tax... [more]
A0A7C8DGN9_9DELT1.460e-9449.65Alginate_exp domain-containing protein n=1 Tax=Myx... [more]
A4BNK9_9GAMM4.410e-9351.23Alginate_exp domain-containing protein n=2 Tax=Nit... [more]
A0A382EPU6_9ZZZZ1.110e-9248.77Alginate_exp domain-containing protein (Fragment) ... [more]
A0A7Y3H098_9DELT5.120e-9249.65Alginate export family protein n=1 Tax=Myxococcale... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig85177contigM-pyrifera_M_contig85177:1..867 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score296.6
Seed ortholog evalue1.3e-77
Seed eggNOG ortholog314278.NB231_10158
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Alginate export
EggNOG OGs1R64D@1224,1S325@1236,COG3637@1,COG3637@2
COG Functional cat.M
Best tax levelGammaproteobacteria
Best eggNOG OGNA|NA|NA
Exons1
Model size867
Cds size867
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816760.0513606-CDS-M-pyrifera_M_contig85177:0..8671622816760.0513606-CDS-M-pyrifera_M_contig85177:0..867Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85177 1..867 -
1692278161.9845376-CDS-M-pyrifera_M_contig85177:0..8671692278161.9845376-CDS-M-pyrifera_M_contig85177:0..867Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig85177 1..867 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig85177.19854.1prot_M-pyrifera_M_contig85177.19854.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig85177 1..867 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig85177.19854.1

>prot_M-pyrifera_M_contig85177.19854.1 ID=prot_M-pyrifera_M_contig85177.19854.1|Name=mRNA_M-pyrifera_M_contig85177.19854.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=289bp
RSTEGRELRAFFTLPVAREPNTFAELRDNDIEFDQEDSDVTFWGLVASEA
WRARDYVEVFYFGLDEDDSSTRQTRNRDISTLGLRLYRDPRAGHFDYEFE
TAFQFGESRSSTAATNSRDLDHFAHFHHAEVGYSFTAPWQPRIVAQYDFA
SGDDNPGDGDYERYSTLYGARRFDFGPTGIYGPFARENLSTPGLRVQVKP
ATKLSGFIAWRAYWLASDRDAWTTAGIVDPSGATDSFIGHQVEMSVRYDV
APGNVRLEGGFAHLFAGGFMEDAPNARQRGDVTYAYTQI
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mRNA from alignment at M-pyrifera_M_contig85177:1..867-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig85177.19854.1 ID=mRNA_M-pyrifera_M_contig85177.19854.1|Name=mRNA_M-pyrifera_M_contig85177.19854.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=867bp|location=Sequence derived from alignment at M-pyrifera_M_contig85177:1..867- (Macrocystis pyrifera P11B4 male)
CGTAGCACGGAGGGGCGCGAGTTGCGGGCGTTTTTCACTCTGCCGGTGGC GCGCGAGCCAAACACGTTCGCCGAATTGCGTGACAATGATATCGAGTTCG ACCAGGAAGATTCCGACGTCACGTTCTGGGGCCTGGTTGCGTCCGAGGCC TGGCGCGCACGCGATTACGTGGAAGTGTTCTATTTCGGTCTCGATGAAGA TGATTCCTCGACCCGGCAGACGCGTAACCGGGATATCTCGACACTCGGTT TGCGACTCTATCGCGACCCGCGCGCGGGACACTTCGACTACGAGTTCGAA ACCGCCTTCCAGTTCGGTGAGTCACGCTCATCAACCGCCGCGACGAATAG CCGCGACCTCGATCATTTCGCCCACTTCCATCACGCGGAGGTGGGATATT CATTCACCGCCCCCTGGCAGCCGCGCATCGTCGCGCAATACGATTTCGCC AGCGGCGACGACAATCCCGGCGACGGTGACTACGAACGTTACTCCACCCT GTATGGCGCGCGCCGCTTCGACTTCGGGCCGACCGGCATCTATGGCCCGT TCGCGCGTGAGAACCTGAGCACCCCGGGACTGCGCGTGCAGGTGAAGCCG GCGACGAAGCTGTCGGGCTTCATCGCCTGGCGCGCCTACTGGCTCGCGAG TGATCGCGATGCGTGGACGACGGCCGGAATCGTCGACCCGAGTGGCGCTA CGGACAGTTTCATCGGTCACCAGGTGGAAATGTCCGTGCGCTACGATGTG GCGCCCGGCAACGTACGTCTCGAAGGCGGGTTTGCGCATCTGTTTGCCGG AGGTTTCATGGAAGACGCACCGAATGCGCGACAGCGGGGCGATGTCACGT ATGCCTACACGCAAATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig85177:1..867-

>mRNA_M-pyrifera_M_contig85177.19854.1 ID=mRNA_M-pyrifera_M_contig85177.19854.1|Name=mRNA_M-pyrifera_M_contig85177.19854.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1734bp|location=Sequence derived from alignment at M-pyrifera_M_contig85177:1..867- (Macrocystis pyrifera P11B4 male)
CGTAGCACGGAGGGGCGCGAGTTGCGGGCGTTTTTCACTCTGCCGGTGGC
GCGCGAGCCAAACACGTTCGCCGAATTGCGTGACAATGATATCGAGTTCG
ACCAGGAAGATTCCGACGTCACGTTCTGGGGCCTGGTTGCGTCCGAGGCC
TGGCGCGCACGCGATTACGTGGAAGTGTTCTATTTCGGTCTCGATGAAGA
TGATTCCTCGACCCGGCAGACGCGTAACCGGGATATCTCGACACTCGGTT
TGCGACTCTATCGCGACCCGCGCGCGGGACACTTCGACTACGAGTTCGAA
ACCGCCTTCCAGTTCGGTGAGTCACGCTCATCAACCGCCGCGACGAATAG
CCGCGACCTCGATCATTTCGCCCACTTCCATCACGCGGAGGTGGGATATT
CATTCACCGCCCCCTGGCAGCCGCGCATCGTCGCGCAATACGATTTCGCC
AGCGGCGACGACAATCCCGGCGACGGTGACTACGAACGTTACTCCACCCT
GTATGGCGCGCGCCGCTTCGACTTCGGGCCGACCGGCATCTATGGCCCGT
TCGCGCGTGAGAACCTGAGCACCCCGGGACTGCGCGTGCAGGTGAAGCCG
GCGACGAAGCTGTCGGGCTTCATCGCCTGGCGCGCCTACTGGCTCGCGAG
TGATCGCGATGCGTGGACGACGGCCGGAATCGTCGACCCGAGTGGCGCTA
CGGACAGTTTCATCGGTCACCAGGTGGAAATGTCCGTGCGCTACGATGTG
GCGCCCGGCAACGTACGTCTCGAAGGCGGGTTTGCGCATCTGTTTGCCGG
AGGTTTCATGGAAGACGCACCGAATGCGCGACAGCGGGGCGATGTCACGT
ATGCCTACACGCAAATCCGTAGCACGGAGGGGCGCGAGTTGCGGGCGTTT
TTCACTCTGCCGGTGGCGCGCGAGCCAAACACGTTCGCCGAATTGCGTGA
CAATGATATCGAGTTCGACCAGGAAGATTCCGACGTCACGTTCTGGGGCC
TGGTTGCGTCCGAGGCCTGGCGCGCACGCGATTACGTGGAAGTGTTCTAT
TTCGGTCTCGATGAAGATGATTCCTCGACCCGGCAGACGCGTAACCGGGA
TATCTCGACACTCGGTTTGCGACTCTATCGCGACCCGCGCGCGGGACACT
TCGACTACGAGTTCGAAACCGCCTTCCAGTTCGGTGAGTCACGCTCATCA
ACCGCCGCGACGAATAGCCGCGACCTCGATCATTTCGCCCACTTCCATCA
CGCGGAGGTGGGATATTCATTCACCGCCCCCTGGCAGCCGCGCATCGTCG
CGCAATACGATTTCGCCAGCGGCGACGACAATCCCGGCGACGGTGACTAC
GAACGTTACTCCACCCTGTATGGCGCGCGCCGCTTCGACTTCGGGCCGAC
CGGCATCTATGGCCCGTTCGCGCGTGAGAACCTGAGCACCCCGGGACTGC
GCGTGCAGGTGAAGCCGGCGACGAAGCTGTCGGGCTTCATCGCCTGGCGC
GCCTACTGGCTCGCGAGTGATCGCGATGCGTGGACGACGGCCGGAATCGT
CGACCCGAGTGGCGCTACGGACAGTTTCATCGGTCACCAGGTGGAAATGT
CCGTGCGCTACGATGTGGCGCCCGGCAACGTACGTCTCGAAGGCGGGTTT
GCGCATCTGTTTGCCGGAGGTTTCATGGAAGACGCACCGAATGCGCGACA
GCGGGGCGATGTCACGTATGCCTACACGCAAATC
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