mRNA_M-pyrifera_M_contig85096.19832.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A7V3I7B5_9BACT (Uncharacterized protein n=1 Tax=Armatimonadetes bacterium TaxID=2033014 RepID=A0A7V3I7B5_9BACT) HSP 1 Score: 141 bits (355), Expect = 1.210e-35 Identity = 96/229 (41.92%), Postives = 126/229 (55.02%), Query Frame = 1 Query: 1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQ---AWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGA------RMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQ--LDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAAR 654 +LKV+LA +P LL APR R+ + LA AGVS S R+++ LE D ++ G L LVRI LL AWR Q +WLV+ DP +AL + A+ VG A R+CLG FAA+ ALG GFV G P H+Y E P + ++ L + EH +A + P PE+VFR V ++GVP AD LQ W+DVS H +RG+ QA EIA R Sbjct: 164 MLKVLLAESIPVNLLSAPRARYRNPTELARAAGVSVMSAFRLVRQLENDGFVDPGEESLELVRIPELLSRWSAWREPIQEFPVRWLVKR-----DPA--AVAALLSSYSAGAASVGDSAAERRRRPRVCLGLFAAADALGFGFVHGVPPHIYMERFDPGVLQRFGLSVEGAEHSPDA--FIRIPPNPEAVFRAAVIKDGVPCADVLQVWLDVSDHPSRGKAQADEIARR 383
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A2V9AEK4_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9AEK4_9BACT) HSP 1 Score: 136 bits (342), Expect = 3.780e-35 Identity = 92/224 (41.07%), Postives = 124/224 (55.36%), Query Frame = 1 Query: 1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPL--DHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVA-VEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARIWS 663 +LKV+LA +P L APRG + AS LAE AGVS S R ++ + +L G LRLVR+ LL W ++Q + + +R L G + V S + A + A + R+CLG FAA+ ALG+GFV G +LY E A+ + L L E +EA+ V P ES FRG V ++GVPV+D LQ W+DVS H +RG+EQA I RI S Sbjct: 16 MLKVLLAPRIPEVYLSAPRGRYQGASQLAEAAGVSVMSAFRFVEEFSKEGFLEPGGGVLRLVRVRELLNRWVAASQPRILEIPMRWVLHRGKKALWNAVRSYQSDEAIASADQLSSPRPRLCLGLFAAAEALGIGFVHGVKPYLYLERLNAAVLKDLGLSGNAEEEEEADLYVRIPGNRESAFRGVVRKDGVPVSDILQVWLDVSQHPSRGKEQADLIWRRILS 239
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A2V9GCF2_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9GCF2_9BACT) HSP 1 Score: 135 bits (339), Expect = 8.570e-34 Identity = 93/226 (41.15%), Postives = 125/226 (55.31%), Query Frame = 1 Query: 1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPL--DHVHSALARRARSHASPVGPEGA---RMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARIWS 663 +LKV+LA +P L APRG AS LAE AGVS S R ++ + +L G L+LVR+ LL W ++QR + + +R L G V S + A S A+PV + R+CLG F A+ ALG+GFV GA +LY E + + L L + A+ V P ESVFRG V+++GVPV+D LQ W+DVS H +RG+EQA I RI S Sbjct: 104 MLKVLLAPRIPDVYLSAPRGHYHGASQLAEAAGVSVMSAFRFVEEFSKESFLESGTGVLQLVRLRELLNRWVAASQRRVLEIPMRWVLQRGKKALWSAVGSYQSDEAMSSANPVDQLSSPRPRLCLGLFEAAEALGIGFVHGAKPYLYLERLNAEVLKDLGLSGNAEEEIADLYVRIPRNRESVFRGVVQKDGVPVSDILQVWLDVSQHPSRGKEQADLIWRRILS 329
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A3D5SMC2_9BACT (RpiR family transcriptional regulator (Fragment) n=1 Tax=Blastocatellia bacterium TaxID=2052146 RepID=A0A3D5SMC2_9BACT) HSP 1 Score: 130 bits (328), Expect = 6.110e-32 Identity = 89/220 (40.45%), Postives = 119/220 (54.09%), Query Frame = 1 Query: 1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPA-FPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 657 +LKV+LA +VP ELL APRG+ R+AS LA A VS S R ++ L+ + YL L LVR E L + W+ SA R L++ +R L G DP + L R CL FAA+ AL LGFV G P ++Y E P+ + P E+ +++R A P+SVFRG V NG+ +D LQ W+DVS H +RG EQA I R+ Sbjct: 153 MLKVLLAPEVPEELLSAPRGQYRNASQLARAAKVSVMSAFRFVQQLQDEGYLSESNPYLSLVRREDLFRRWQASAVRSLKEVPMRYLLKG-DPRAQLRKMLGS-------------GRACLALFAAADALKLGFVEGVPPYVYVERIQPSNLSVWKNLRRCGPSESPELILRQAPAPQSVFRGLVRPNGMATSDVLQVWVDVSSHPSRGREQADLIRKRV 358
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: Q01P64_SOLUE (Uncharacterized protein n=1 Tax=Solibacter usitatus (strain Ellin6076) TaxID=234267 RepID=Q01P64_SOLUE) HSP 1 Score: 131 bits (329), Expect = 8.190e-32 Identity = 86/233 (36.91%), Postives = 122/233 (52.36%), Query Frame = 1 Query: 1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQ-----WLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGAR---------MCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 657 +LK++L + +P LL PR +R+ S LA++A VS S SR++K L + Y+ L +VR + LL W SA RP + W+++ D + S A S P R C+G FAA+ ALGLGFVRG P +LY E P L ++L L + + + + P+ ES+FR V R+G+PV+D LQ W+D S H ARG EQ+ EI RI Sbjct: 168 MLKILLGQHLPESLLSIPRERIRNTSQLADVARVSMMSASRLVKQLITEGYIDEHEDHLHVVRADDLLDRWI-SANRPRSRDVPAHWIIKK-----DERQFLASVGQYAAESRTDPKPKSRVRNRLVKAQPRCCIGLFAAADALGLGFVRGVPPYLYLEGLDPNLLQRLGLSIEDSGRRPDVYIRVPSNKESIFRAAVIRDGLPVSDVLQVWLDTSTHPARGREQSDEIRRRI 394
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A2V9FI27_9BACT (Uncharacterized protein n=3 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V9FI27_9BACT) HSP 1 Score: 130 bits (327), Expect = 1.610e-31 Identity = 86/225 (38.22%), Postives = 127/225 (56.44%), Query Frame = 1 Query: 1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPL--DHVHSALARRAR----SHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 657 +LKV+LA +P L APRG+ + AS LA AGVS S R ++ + +L G LRLVR L+ WR ++QR + + ++ L G+ + S L++ ++ S+ P P R+CL F A+ ALG+GFVRGA ++Y E + + L L ++A+ V P ESVFRG VE++G+PV+D +Q W+DV H ARG+EQA I +I Sbjct: 171 MLKVLLAPRIPESYLSAPRGQYQGASQLAAAAGVSVMSGFRFIEEFSKEGFLESGQGPLRLVRWRELMNRWRAASQRRVVEVPMQWVLHKGEKALRSALRSYLSKESKPSRDSNEHPPSPR-PRICLALFEAAEALGIGFVRGAKPYIYVERLNGDVLKDLGLSENAEEQDADIYVRLPGNRESVFRGVVEKSGLPVSDIIQVWLDVGQHPARGKEQADIIWRKI 394
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A6P1J280_9BURK (Uncharacterized protein n=1 Tax=Hydrogenophaga sp. BPS33 TaxID=2651974 RepID=A0A6P1J280_9BURK) HSP 1 Score: 127 bits (320), Expect = 1.250e-30 Identity = 85/217 (39.17%), Postives = 118/217 (54.38%), Query Frame = 1 Query: 1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQ-LDLVAVEHPKEAEWIVVRPAF-PESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEI 645 +LKV+LA D+P ELL APRG S +ALAE A VS+ S SR LKAL + +L + + LVR E L WR + R + +R S + S ++ +G + + CLG FAA+ LGLG V G P ++ C A LP L + + V +P+ ++R P+S FRG V R+G AD +Q W+DVS H +RG+EQA I Sbjct: 171 MLKVLLAPDIPPELLHAPRGRYDSGAALAEAALVSNMSASRFLKALRREKFLDESKNHIALVRREELFMRWRAAGLRSCPEIPMRIS---------IRSTAQQQIHRF---IGEQNGQACLGLFAAADGLGLGHVSGVPPYI-CVAKLPQLGSPGIAVPMVAYPEGVPDFILRQTLSPQSTFRGAVRRDGTAYADVIQTWLDVSNHPSRGQEQADHI 374
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A446C646_9BURK (Uncharacterized protein n=2 Tax=Achromobacter veterisilvae TaxID=2069367 RepID=A0A446C646_9BURK) HSP 1 Score: 127 bits (318), Expect = 2.090e-30 Identity = 88/222 (39.64%), Postives = 122/222 (54.95%), Query Frame = 1 Query: 1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQR-----PLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYC-EAPLPALFEQLDLVAVEHPKEAEWIVVRPA-FPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEI 645 +LK++LAR++P LL APR + R+ S LAE A VS+ S SR L+ L ++ YL + L+LVR EAL + W + R P L P LP L H+ A CLG FAA+ L +G V G P ++Y + P P + +L+A HP E +++R A FP+S FRG ++RNGV V+D +Q W+DV H ARG EQA+ I Sbjct: 166 MLKLLLARELPEGLLNAPRKKFRNGSELAEAARVSAMSASRFLQQLRSEGYLSDSSPYLKLVRREALFRRWSAATMRSCPEMPCRFLLRMPVLPQIQGLLGGHTEDA-----------------CLGLFAAADELDIGHVSGVPPYVYVHKLPRPGSPDWPELIA--HPSERPDLILRQAVFPQSTFRGAIDRNGVMVSDVIQIWLDVMHHPARGAEQATLI 368
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: UPI001E3B0505 (hypothetical protein n=1 Tax=Luteimonas sp. XNQY3 TaxID=2878686 RepID=UPI001E3B0505) HSP 1 Score: 126 bits (316), Expect = 4.120e-30 Identity = 82/223 (36.77%), Postives = 120/223 (53.81%), Query Frame = 1 Query: 1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAEWIVVRPA-FPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARIWSE 666 +LKV+LA ++PA LL APRGE R S LA A VS+ S SR ++ L+ + +L LRLVR L + W+ +A R + + +PGG AR+ S + C+G FAA+ LG+G V G +LY P + + P E +++R A PES+FRG V+ G+PV+D LQ W+D S H +RG EQAS + +++ S+ Sbjct: 167 MLKVLLAPEIPANLLTAPRGEYRGGSELASAAQVSAMSASRFVRRLQEEGFLDDSGRALRLVRRRELFRRWQSAAMRSSPELPMSFLIPGG----------ARQLNKVVSRL-----EACVGVFAAADMLGIGHVSGVAPYLYVRRLRPPSEDSWPGLVPSPPGEPPQVILRQANAPESLFRGAVQVEGMPVSDVLQIWLDASAHPSRGAEQASLLRSKMLSD 374
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Match: A0A5P2HAR0_9BURK (RpiR family transcriptional regulator n=1 Tax=Cupriavidus pauculus TaxID=82633 RepID=A0A5P2HAR0_9BURK) HSP 1 Score: 125 bits (315), Expect = 5.640e-30 Identity = 88/222 (39.64%), Postives = 118/222 (53.15%), Query Frame = 1 Query: 1 LLKVMLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRGAHELRLVRIEALLQAWRRSAQRPLEQWLVRPSLPGGDPLDHVHSALARRARSHASPVGPEGARMCLGHFAASRALGLGFVRGAPLHLYCEAPLPALFEQLDLVAVEHPKEAE---WIVVRPAFPESVFRGCVERNGVPVADALQCWIDVSFHAARGEEQASEIAARI 657 +LKV+LA ++PA LL APR E +S + LAE A VS SVSR L AL D +L G LRLVR EAL + W+ SA R V P P + V ++ +G + C+G FAA+ A GLG V G P H+Y + + + + +E E I+ +P FPESVFRG V + V DA+Q W+DV H +RG EQA I ++ Sbjct: 163 MLKVLLAPEIPASLLTAPRKEFKSGTELAEAAKVSPMSVSRFLGALRRDGFLSSG-RTLRLVRREALFERWKSSAVR------VGPEQPSRYLISDVDGGQLKKF------MGRYRSEACIGLFAAADAYGLGHVSGVPPHVYVRK-IGSSIDGDQWKGIRPAREGEKPSLILRQPLFPESVFRGAVHSDQVSATDAIQVWLDVFLHPSRGREQAKLIEEKL 370 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig85096.19832.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig85096.19832.1 >prot_M-pyrifera_M_contig85096.19832.1 ID=prot_M-pyrifera_M_contig85096.19832.1|Name=mRNA_M-pyrifera_M_contig85096.19832.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=223bp MLARDVPAELLGAPRGEVRSASALAELAGVSSASVSRILKALEADDYLVRback to top mRNA from alignment at M-pyrifera_M_contig85096:2..867+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig85096.19832.1 ID=mRNA_M-pyrifera_M_contig85096.19832.1|Name=mRNA_M-pyrifera_M_contig85096.19832.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=866bp|location=Sequence derived from alignment at M-pyrifera_M_contig85096:2..867+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig85096:2..867+ >mRNA_M-pyrifera_M_contig85096.19832.1 ID=mRNA_M-pyrifera_M_contig85096.19832.1|Name=mRNA_M-pyrifera_M_contig85096.19832.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1338bp|location=Sequence derived from alignment at M-pyrifera_M_contig85096:2..867+ (Macrocystis pyrifera P11B4 male)back to top |