mRNA_M-pyrifera_M_contig8496.19802.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8496.19802.1
Unique NamemRNA_M-pyrifera_M_contig8496.19802.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: D7FRF4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FRF4_ECTSI)

HSP 1 Score: 110 bits (274), Expect = 7.910e-26
Identity = 46/63 (73.02%), Postives = 51/63 (80.95%), Query Frame = 1
Query:    1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVNYLTAPKPKTYPIGTFKFEA 189
            MVF GQDAWRKHPMLTGCYKRPFPGLG A+ +FAGYCV+DG + + TAP    Y  GTFKFEA
Sbjct:    1 MVFGGQDAWRKHPMLTGCYKRPFPGLGIALGLFAGYCVLDGTIKFATAPTKDLYAPGTFKFEA 63          
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A662XPS6_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XPS6_9STRA)

HSP 1 Score: 68.2 bits (165), Expect = 8.550e-11
Identity = 35/66 (53.03%), Postives = 40/66 (60.61%), Query Frame = 1
Query:    1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVNYLTA----PKPKTYPIGTFKFE 186
            MV A QDAWRKHP +TGC K+PF GLG A AIF  Y VVD   +  +     P+    P G FKFE
Sbjct:    1 MVLAHQDAWRKHPFITGCGKKPFTGLGMASAIFGVYLVVDLITSRSSPHDPHPQMDYIPRGKFKFE 66          
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: K3WAK3_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WAK3_GLOUD)

HSP 1 Score: 67.0 bits (162), Expect = 2.430e-10
Identity = 28/40 (70.00%), Postives = 31/40 (77.50%), Query Frame = 1
Query:    1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVD 120
            MV A QDAWRKHP ++GC K+PFPGLG A AIF  Y VVD
Sbjct:    1 MVLAHQDAWRKHPFISGCAKKPFPGLGIASAIFGAYLVVD 40          
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A024TWK1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TWK1_9STRA)

HSP 1 Score: 66.2 bits (160), Expect = 3.760e-10
Identity = 28/44 (63.64%), Postives = 29/44 (65.91%), Query Frame = 1
Query:    1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN 132
            MV AGQDAWR HP LTGC K+P PG G A  IFA Y  VD   N
Sbjct:    1 MVLAGQDAWRSHPFLTGCIKKPVPGFGMAAGIFAVYLTVDTIAN 44          
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: W4GNJ0_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNJ0_9STRA)

HSP 1 Score: 65.9 bits (159), Expect = 9.990e-10
Identity = 28/44 (63.64%), Postives = 29/44 (65.91%), Query Frame = 1
Query:    1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN 132
            MV AGQDAWR HP LTGC K+P PG G A  IFA Y  VD   N
Sbjct:   25 MVLAGQDAWRSHPFLTGCIKKPIPGFGIAAGIFAVYLTVDTISN 68          
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A1V9Y7Y0_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7Y0_9STRA)

HSP 1 Score: 64.3 bits (155), Expect = 1.790e-9
Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 1
Query:    1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN 132
            MV A QDAWRKHP L+ C K+PFPGLG A  IF+ Y VVD    
Sbjct:    1 MVLAHQDAWRKHPFLSNCSKKPFPGLGIAAGIFSVYLVVDAVTG 44          
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A3F2RSI1_9STRA (Uncharacterized protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RSI1_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 8.780e-9
Identity = 32/70 (45.71%), Postives = 38/70 (54.29%), Query Frame = 1
Query:    1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN--------YLTAPKPKTYPIGTFKFE 186
            MV A QDAWR HP ++ C K+PF GLG A AIF  Y  VD   N        + T P+    P G FK+E
Sbjct:    1 MVLAHQDAWRSHPFISNCAKKPFTGLGLASAIFGVYLAVDTINNRFKSHPDEHSTHPEMDYVPGGKFKYE 70          
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A2D4BKS1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BKS1_PYTIN)

HSP 1 Score: 62.4 bits (150), Expect = 1.060e-8
Identity = 27/44 (61.36%), Postives = 30/44 (68.18%), Query Frame = 1
Query:    1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN 132
            MV A QDAWRKHP +TGC K+PF GLG A AIF  Y V D   +
Sbjct:    1 MVLAHQDAWRKHPFITGCAKKPFTGLGTASAIFGVYLVFDAITS 44          
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A3R7G059_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7G059_9STRA)

HSP 1 Score: 62.4 bits (150), Expect = 1.530e-8
Identity = 32/70 (45.71%), Postives = 38/70 (54.29%), Query Frame = 1
Query:    1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVN--------YLTAPKPKTYPIGTFKFE 186
            MV A QDAWR HP ++ C K+PF GLG A AIF  Y  VD   N        + T P+    P G FK+E
Sbjct:    1 MVLAHQDAWRSHPFISNCAKKPFTGLGLASAIFGVYLAVDTINNRFKSHPDEHSTHPEMDYVPGGKFKYE 70          
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Match: A0A6A3NMB4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora TaxID=4783 RepID=A0A6A3NMB4_9STRA)

HSP 1 Score: 62.8 bits (151), Expect = 1.690e-8
Identity = 31/70 (44.29%), Postives = 39/70 (55.71%), Query Frame = 1
Query:    1 MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVNYLTA--------PKPKTYPIGTFKFE 186
            MV A QDAWR HP ++GC K+PF GLG A AIF  Y VVD      ++        P+    P G F++E
Sbjct:   32 MVLAHQDAWRSHPFISGCAKKPFTGLGLASAIFGVYLVVDTITTRFSSHGKEGGAHPEMDYVPRGKFQYE 101          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8496.19802.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 22
Match NameE-valueIdentityDescription
D7FRF4_ECTSI7.910e-2673.02Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A662XPS6_9STRA8.550e-1153.03Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
K3WAK3_GLOUD2.430e-1070.00Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024TWK1_9STRA3.760e-1063.64Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
W4GNJ0_9STRA9.990e-1063.64Uncharacterized protein n=3 Tax=Aphanomyces astaci... [more]
A0A1V9Y7Y0_9STRA1.790e-961.36Uncharacterized protein n=1 Tax=Thraustotheca clav... [more]
A0A3F2RSI1_9STRA8.780e-945.71Uncharacterized protein n=1 Tax=Phytophthora kerno... [more]
A0A2D4BKS1_PYTIN1.060e-861.36Uncharacterized protein n=1 Tax=Pythium insidiosum... [more]
A0A3R7G059_9STRA1.530e-845.71Uncharacterized protein n=2 Tax=Phytophthora kerno... [more]
A0A6A3NMB4_9STRA1.690e-844.29Uncharacterized protein n=3 Tax=Phytophthora TaxID... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8496contigM-pyrifera_M_contig8496:2533..7668 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score110.2
Seed ortholog evalue4.4e-22
Seed eggNOG ortholog2880.D7FRF4
Hectar predicted targeting categoryother localisation
EggNOG OGs2E7JH@1,2SE52@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-08_000750.1
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size1529
Cds size225
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8496.19802.1prot_M-pyrifera_M_contig8496.19802.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8496 2533..6364 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816757.4698431-CDS-M-pyrifera_M_contig8496:2532..26741622816757.4698431-CDS-M-pyrifera_M_contig8496:2532..2674Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8496 2533..2674 +
1692278160.4790394-CDS-M-pyrifera_M_contig8496:2532..26741692278160.4790394-CDS-M-pyrifera_M_contig8496:2532..2674Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8496 2533..2674 +
1622816757.484143-CDS-M-pyrifera_M_contig8496:6281..63641622816757.484143-CDS-M-pyrifera_M_contig8496:6281..6364Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8496 6282..6364 +
1692278160.491201-CDS-M-pyrifera_M_contig8496:6281..63641692278160.491201-CDS-M-pyrifera_M_contig8496:6281..6364Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8496 6282..6364 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816757.4964333-UTR-M-pyrifera_M_contig8496:6364..76681622816757.4964333-UTR-M-pyrifera_M_contig8496:6364..7668Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8496 6365..7668 +
1692278160.502461-UTR-M-pyrifera_M_contig8496:6364..76681692278160.502461-UTR-M-pyrifera_M_contig8496:6364..7668Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8496 6365..7668 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8496.19802.1

>prot_M-pyrifera_M_contig8496.19802.1 ID=prot_M-pyrifera_M_contig8496.19802.1|Name=mRNA_M-pyrifera_M_contig8496.19802.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=75bp
MVFAGQDAWRKHPMLTGCYKRPFPGLGYAVAIFAGYCVVDGAVNYLTAPK
PKTYPIGTFKFEAPKDDDDDDDDE*
back to top

mRNA from alignment at M-pyrifera_M_contig8496:2533..7668+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8496.19802.1 ID=mRNA_M-pyrifera_M_contig8496.19802.1|Name=mRNA_M-pyrifera_M_contig8496.19802.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=5136bp|location=Sequence derived from alignment at M-pyrifera_M_contig8496:2533..7668+ (Macrocystis pyrifera P11B4 male)
ATGGTGTTTGCTGGGCAGGACGCGTGGCGAAAGCACCCGATGTTGACGGG TTGCTACAAGCGTCCCTTTCCGGGGCTCGGCTACGCTGTGGCCATTTTTG CGGGTTACTGCGTAGTCGACGGGGCTGTCAACTACCTCACCGGTGAGAGG TAGTGCAGGGGGGGGGAGAGAGAGAGACGGAAGTACTCCTTCGCGAATTT GGAAGAGTACGGCACACTGGTGGGATACTCGCCAAGGACAGCAATGATGT ACATATCATGTTGATGTAGTGTAATAAGACGCGCGAGCTAGCTACGGGTA AGCGACGGGTACGTATGAAATGATATACAGCAGTAGCTTGGCTTTAGTTC GTCGATAGACACACACAGACACGCCTGATACAAAGAAACAGACAGCTCCT CTCGTGTGCGAGTAGGGGCTCGGAAGCCAGGAAGGGTAGTGTAGAGCCCG TTTTTATCAGTGCCGGCCGAGCTGCATTGCCTCTCTTCTGTCCAGGTTTG TTCGTGCTCGTAGGGGAACCATTGCGACTTTTTTACTATACGTAATAGGC ACGTTCTACTCGTACAACAACGGCGATGTAGTCTTACACCCGCGCTTCTG CGAGCGTTCTTGTGGTTGCCTCATCTCAAGAGCGCGCTGCTCGGATTTCT GACCCATGGTCGACCCATGAGCGTCCCATGGGCCAGCTTTGTAAAACCAT GCGTCACCCATGAGTCGGGTCACCCAGGGGTCGCCCACCGGTCGTCCATG GGTTTCTGGTGCTGGCCCGTGACCTAGGTACGTACGGGTTTTTCGTGCTT GTCTAGGGTCTCCCACGGGTTGTTGGTGCTGGCTTGCGAGTCATCCATGA AACAGGTCTCCCGTGGAATCAGATTACTGGCCGATGGGTCGCCCAAGGGA CTCCCGTGGGACTCCAGCGGGTGTCTTATGAGCTTCCTACGGGACACTCA ATAAATGCCCCTGAAGGGCGCGCAAAAGTACCCATATTATGGTAAAAGAG AGCGATTGTGCATCTTTGTACAATTGTTTCAATCTTTGGAGTACGAGTAT GGAGTCGGAGATGGCGAGCTGGTACCGCCATGAGCCATGTAGTGGCGCGT TCTTCTATTTGTATATAGCGCATTACCAGGGCAACGCGACGTACGATTTG CTGCTGCTGCGTTCTTGCATTCGATTTGCCCTAAACTGTTGCAGGTCTGC AGCGAAGATGCGTGCGCAATATGCGGAATCTCGACTGCACTCCAGTTCCG AGGCGAAGCTCGAACTGACCTCGAGGACTCGTACTCGCATTCCATTCGTG CTCGTGTATACCCGCGATGTAATATAGTATGCACTGCTTTCTTGACACGA AGCTTTCGCCGCAAGCGTCGACACGTTACGTACGTACTTCCTCTTACTGC TACTGAAGCTTAGTTAGTGCGGAACGCCTATAAATAGCTGTAAGAAGAAA GAAAACTAGCCAAGGCTGGATTTCTTACTTCAGGACAATGTTTGTTTTTT GTGTTTTCCGCTGTTACTAGCTTCAGTGTATCACCCGTAGACCGTTTCCA CTTCCTATGTTGATCGAATATTGCCAGCTCTTTCCCTCGCGCTTTCCGTG ACCGAGAAAGATGGTTTCAGCATCTATAGCATCTTTAGTCGAAACCCCGA ACTTGAGCAAGCAAAGGTGACAATCTGTCGATTAGACTACCCAACCCTCA CGCCACTTCGTGTACAAAGTGTAAAGTAATGCATTACAGGGGGCATACTA TTACGGGGGGCCACAGTAAATAGGACCTATGGTACACACAAAAACATGTA TTGTTCCCTATTTTTACTAACAATATTTGGTCCTATTTACTATGATCCCC CGTAATGTTCAAACCCGCGTTGGACCCAAAAACCAGGCACCAGGTACCCT CTATGACATGGCCACGTACAATACTTGATTCAGATTACTAGCAATAGATT TCGCCGTACGAGTAGAGGTGAAGTCGGCATTTGCCAGTATCATAGCTGTT TATGGTGGAAATAAAGGATCTTCCCGAAGTCAGCTTTTACTATCACACCC TCCGAGGCCCAAGACGTACCCATGCAGACGTACCACGTACCTACGCGCAA TGTTTTAACCCCTCTGGCATTAACCCGGGATAGTGACCACAAACAATGAC AACTTTGGTGTTTTCAACCGCCTGTACGAGCTATACAGCAGCGTCAGCGT CAAGCAGTATTTACGGGTATAACAGATAAAGGATCATGCTGCCTGCGCCC GTGCCGTTCGACTCCTCGCATTCAACCATGGTAGGTCGGACACCGATTTG TATCACCCCTCAATCACGGTTGGTCGTTGAGTGGCCGTTGCTGGAATCGT CAATTTTTTCATTGTCGTCTTCCACCTCTGAAGACTGAAGCGGGTTCATA TTTTCGCCCTGTTGAGGCTACCGAGGGACAATATTGTCGAAATGAAGTGA CGATTACAACATCAACGATCGGCCACGCGACGCTGCCCGGGCTGCCGCGG TAATGCTGGAGTAACAGATGTGTCTGGATTGCAAAACGTAGTGAGCAGCA CAAGTGTATGTGTTGTCTTCACATTGAACCGTTTTTTCTACCCAACTACA GCAAAGTACACCCAGTGTCCGTCCTGATTCCTAATCCGAGAGAGATACTA ATTTTATGGTCACACACTGTGGGACAGAAGAAGAACAAAGCAAAAATAAT CGTGAATGAATGGGTAACGCATGTGAAATGCAAACGTACCGGGTACGAGA ACACAACAACACAAGCCGGACCTAAAAATAAGAACAAATATGGCAACAAA AACTTAGGGTTACGTGCGCAGAGTTATCATTGCTAGTACTGCTTCAGATT CTTCTTTATATTGGACGGTTGTCCCGAAGTTTTTTTGCATTTTGTTGGGG GTCGTTCATAACTGGTTCTACTGCAAGGTGTTACCCCCATTCGGGCCCCA GGATAAAGAGCAAAACAATGGTTGACAACGTTGGTCTTGTGTATCAAGTC TAGGAGCAGCGTGAGAGTCCACCAAGTACGGGTAGGATTATGTTGCTACT CGTGCCATACGACTCCTTCCATCGTAGAACTCGGACACCAAATTGAAACT TCCCCCAATCACGCATTGGCCGTTGCTGTGATCGTCACTTTTTTATCGAT AAGGTTTCCCTCTGAAGTCCCAAGAGGGTTCAAGTACTAATGATAGTATG AATAATAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTGGTGG TCGTAGTATTACTAGTAGTGCTATTAATAGTAAACCCTAACCCTAGCCCT AGCCCTAAGTACTGGTATGGTAACACTACTGCTGTAGTACCAATGTAGTA CTATTACGGGGGTCCATAGTTAACAGGACCTATGGTGTACATAAAAACCT ATATATTTTCCTAGTTTTACTAACAAAATTTGGTCCCGTTAACTATGGAC CCCTGTAATAGTGCTGTAGCAATGGTGGTGCTAGTGAAGGCACTATTTTG TAACGACACGGGCGCAGCACGATATTATTTTTATTCTGCGCGTGTTGGAC GCGTGATAAATTCGCGCTCCTCGGGGGTTCAGACCGCGGTGATATACCTG GGTCCCGAAATGGTTGTATTGCGTTAAAAACAGTATTTTTAGTAGTGAAA TCATTGTTTCCACCGAGCTTTTTTTTTAACGATGCCCTCCCCTCCTCCTC CCGTCCCCTCCCTTATGCACGCTTTTCTTTGCCGCTGTCGGTGGAGCAGC CCCGAAACCGAAGACGTACCCTATAGGCACCTTCAAGTTCGAGGCACCGA AAGACGACGACGACGACGACGATGACGAGTAGGGCCCCGATTGGCCGACC ATCTAACTCGCTCGTCAAGCTATCATAGACGGGGGGAGCCCATACCATGG AAATCCATGCCACGAAGTTTCCCCTCGGGTAGGAGTAGGCTCACCGCGTG CGAACTCTATGCCATGAGGTTCCCTCTTGGCTTGGAGTAGGCACGCCGTG CGTGTGGCCAAAGCAGGGATTGTCTGTGTCGAGAAATCTCGAAAGTGTTT TTTGGGCTATATATACATCGCTGGAAGATTTCAAGGCGATGGTCCAGAGC GCTCGGTTATATTTTTGCTTTGTGAAGCGGGGGGGGAGTTTGATTTTTTT CAGGAAGGCCTAATGTGCCGAGCGAAGTGGGTAGTTGTCCTTGCCCCTCC CCAACTTCGTTTTTCAGAGCGGGTTGATAGGCCACCGTACGTACATGCGT ACGTGTTCGGTTGTGTTACACCCCTCGCCTGCTTCTTCGAAGTGCTTCAC GCCTTCGCAGTTGGGTCGGGGGAGTGTATGTGAAGGGGGAGGGTATGACA TTGAGATTGTCATGAAGAGCATGATCATAGCGGAATGTGGTCACAGCACG TTGTTGGCTCTAGTTCGTGCAGCTTCGGCAATGGATCAGGAAGACAATAC AAGTACAGATCGTGGGAGAAAGGGTCTCGATGCGGAGGGCTCAGGGAACC GGGGCGCTGAGTGGTTTTGTTTTCGCTGTGCATTTGGACACGCGCCGCTA CTGGATGCGCGGCAATCATAAAAGCATTCGATCAAGCATGCAAGCAATAC AACTAATCAGCTTGGTGGCATGTTCGATGCGTTGAAACGACGAATTCCTC TTTGTGACTCGTACCTGGTAAGTCTAAGAGACCAGGAGTGCAGCGCAATA GGTGGTACACCTTAAGTACGGGGACACGGGCCGCCTAACCATGGGACAGA TGACACACACCCTCGTAAGCTGCAGCCAAGACAACAATGGCCATATGATG GAGACCAGCAAACTTTTCCGCGTCAGCACAGGAAGGAGGTTGCGATAGCC CACAGCCGATCGTATGATTTCCCTGTGTCCCCGGAGATGTAAAAGCGATT AGGGTACGTACTTATTTTCCATCCTCCACACCTAGGATGGGGCCAAGCAA CGTCTTGGTAGGAGATAACCCCGCCGACGGGCGGGGCGCCAGAAGCTTAA ATTTGGTGCCGGGCTTTGCCCGAGAAACAGACGTTGTGTGACAGACGATA CTCTATTTTAGCTACTCCCAGGTATAAAATAGCATGTACCCATTACTCTT GCGATACAGGCTTGAGCCGTTTAAATGTTCGGAAAA
back to top

Coding sequence (CDS) from alignment at M-pyrifera_M_contig8496:2533..7668+

>mRNA_M-pyrifera_M_contig8496.19802.1 ID=mRNA_M-pyrifera_M_contig8496.19802.1|Name=mRNA_M-pyrifera_M_contig8496.19802.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=450bp|location=Sequence derived from alignment at M-pyrifera_M_contig8496:2533..7668+ (Macrocystis pyrifera P11B4 male)
ATGGTGTTTGCTGGGCAGGACGCGTGGCGAAAGCACCCGATGTTGACGGG
TTGCTACAAGCGTCCCTTTCCGGGGCTCGGCTACGCTGTGGCCATTTTTG
CGGGTTACTGCGTAGTCGACGGGGCTGTCAACTACCTCACCGATGGTGTT
TGCTGGGCAGGACGCGTGGCGAAAGCACCCGATGTTGACGGGTTGCTACA
AGCGTCCCTTTCCGGGGCTCGGCTACGCTGTGGCCATTTTTGCGGGTTAC
TGCGTAGTCGACGGGGCTGTCAACTACCTCACCGCCCCGAAACCGAAGAC
GTACCCTATAGGCACCTTCAAGTTCGAGGCACCGAAAGACGACGACGACG
ACGACGATGACGAGTAGCCCCGAAACCGAAGACGTACCCTATAGGCACCT
TCAAGTTCGAGGCACCGAAAGACGACGACGACGACGACGATGACGAGTAG
back to top