mRNA_M-pyrifera_M_contig100909.198.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig100909.198.1
Unique NamemRNA_M-pyrifera_M_contig100909.198.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Match: A0A7S4HMU4_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4HMU4_9EUKA)

HSP 1 Score: 171 bits (432), Expect = 5.840e-51
Identity = 71/141 (50.35%), Postives = 99/141 (70.21%), Query Frame = 1 
Query:    1 HGKHAMFSTEGVRLCFNYWEGRGHEVIGFMPEHYLNRKPNPNAKTTMADHLERVDNPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHIDKAQEEKRGRVRYWLRQHCVSFAFAGSCFMPDPDFEFP 423
            HGK   FST+G+ +C +Y+  RGHEVI F+PEHY+++KP      T+A++L +VDN  L+      G L  TP  +YDDSYCI+YA+ N GVIVT D + DHI+K +  +RGR RYW+++HC+SF F    F+P+PDF+FP
Sbjct:   78 HGK-KTFSTKGIAICADYYIHRGHEVIAFLPEHYVSKKPQNGNSVTLAEYLPKVDNMKLIESLEKRGILFFTPPQDYDDSYCIKYARSNQGVIVTNDLYRDHIEKTEMNERGRTRYWIKRHCISFTFVKDQFLPNPDFKFP 217
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BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Match: A0A7S0NB25_9CHLO (Hypothetical protein n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0NB25_9CHLO)

HSP 1 Score: 150 bits (379), Expect = 1.310e-43
Identity = 69/149 (46.31%), Postives = 99/149 (66.44%), Query Frame = 1 
Query:    1 HGKHAMFSTEGVRLCFNYWEGRGHEVIGFMPEHYLNRKPNPNAKTT----MADHLERV-DNPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHIDKAQEEK-RGRVRYWLRQHCVSFAFAGSCFMPDPDFEFPKP 429
            HG+  +FS EG+RL   YW  RGH+V+GF+PE+Y +     N ++     + D   R+ DN  L++  V++G+LVLTP  +YDDSYCI YA+++ G IVT DR+ D+I+KA   + R     W+R HC+SF FAG  F+P+PDF+FP P
Sbjct:   17 HGRKKVFSCEGIRLAVEYWTARGHKVLGFLPEYYTDHAYVGNMRSATKLGLVDKPARLPDNIALIQKLVEQGQLVLTPPMDYDDSYCIAYARKHGGSIVTNDRYWDYIEKAGGGRARAETLQWIRSHCISFTFAGDEFLPNPDFQFPPP 165
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BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Match: L8H708_ACACA (RNase NYN domain-containing protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8H708_ACACA)

HSP 1 Score: 159 bits (401), Expect = 2.100e-42
Identity = 66/141 (46.81%), Postives = 97/141 (68.79%), Query Frame = 1 
Query:    1 HGKHAMFSTEGVRLCFNYWEGRGHEVIGFMPEHYLNRK-PNPNAKTTMADHLERVDNPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHIDKAQEEKRGRVRYWLRQHCVSFAFAGSCFMPDPDFEF 420
            H  +   S  G++L   YW+ +GH+VI F+PEHYL+RK P P+ + T+ +++   DN +LL   VD+G +VL P  +YDDSYCI+Y+K++   IVT DR+ DHI +  E++R  V  WLR+HC+SF FA + F+P+PDF F
Sbjct:  621 HANNKKVSVRGIQLAIQYWQKKGHQVIAFIPEHYLHRKAPPPDKEQTLGEYMPMADNTELLAQLVDDGSVVLCPPQDYDDSYCIEYSKRHGAYIVTNDRYWDHIARQPEDQRAGVTRWLREHCISFTFAKNEFLPNPDFAF 761
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BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Match: UPI000644C6F7 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644C6F7)

HSP 1 Score: 136 bits (342), Expect = 2.580e-34
Identity = 63/143 (44.06%), Postives = 91/143 (63.64%), Query Frame = 1 
Query:    1 HGKHAMFSTEGVRLCFNYWEGRGHEVIGFMPEHYLNRKPN-PNAKTTMADHLERVDNPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHIDKAQEE-KRGRVRYWLRQHCVSFAFAGSCFMPDPDFEFP 423
            +G    FS   ++    Y+  RG EVI F+PEH   RKP+ PNA   + D    VD+  +    V++G + +TP  +YDDSY IQYAK++  +IVT DR+NDHI+K + E +R + R ++R+HC+SF FA   F+P+PDF FP
Sbjct:  660 YGNSKTFSVLAIKKAIEYYSQRGFEVITFVPEHVATRKPSGPNAPMRITDFQPFVDDMKMFNELVEKGLVCMTPPQDYDDSYAIQYAKKHGAMIVTNDRYNDHINKQETEAERQKARRFIREHCISFTFARHEFLPNPDFVFP 802
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BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Match: F0Z9B4_DICPU (RNase NYN domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0Z9B4_DICPU)

HSP 1 Score: 136 bits (342), Expect = 2.750e-34
Identity = 62/138 (44.93%), Postives = 95/138 (68.84%), Query Frame = 1 
Query:   16 MFSTEGVRLCFNYWEGRGHEVIGFMPEHYLNRKPNPNAKT-TMADHLERVDNPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHIDKAQEE-KRGRVRYWLRQHCVSFAFAGSCFMPDPDFEFP 423
             FS   ++   +Y++ RG++V+ F+PE + +RKP+   K+ TM D  +  D+   L+  V+  ++ LTP+ +YDDSY IQYAK NN  IVT DR+NDHI+KA+ E +R ++R ++R HC+SF FA   F+P+PDF+FP
Sbjct:  877 QFSVASLKKALDYYKIRGYDVVAFVPESFASRKPHSGPKSFTMFDFNDVADDLVGLQKLVESAQVCLTPAQDYDDSYTIQYAKNNNACIVTNDRYNDHIEKAKTEVERQKIRKFIRDHCISFTFARGDFIPNPDFKFP 1014
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BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Match: D3B617_POLPP (RNase NYN domain-containing protein n=1 Tax=Polysphondylium pallidum (strain ATCC 26659 / Pp 5 / PN500) TaxID=670386 RepID=D3B617_POLPP)

HSP 1 Score: 132 bits (333), Expect = 4.450e-33
Identity = 61/143 (42.66%), Postives = 91/143 (63.64%), Query Frame = 1 
Query:    1 HGKHAMFSTEGVRLCFNYWEGRGHEVIGFMPEHYLNRKPN-PNAKTTMADHLERVDNPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHIDKAQEE-KRGRVRYWLRQHCVSFAFAGSCFMPDPDFEFP 423
            +GK   FS   ++   +Y+  RG+E + F+PE   +RKP  PNA   + D    VDN  + +  V    + LTP  +YDDSY IQYAK++N +IVT DR+NDHI+K + + +R + R ++R+HC+SF F    F+P+PDF+FP
Sbjct:  797 YGKKNCFSVIAIKKALDYYIQRGYEAVAFVPESVASRKPTGPNAPMKLLDFQPVVDNFAMFQELVARELVCLTPPQDYDDSYAIQYAKKHNAIIVTNDRYNDHINKQETDAERQKARKFIREHCISFTFVRQEFLPNPDFQFP 939
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BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Match: A0A151Z3Z9_9MYCE (RNase NYN domain-containing protein n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151Z3Z9_9MYCE)

HSP 1 Score: 129 bits (323), Expect = 9.780e-32
Identity = 56/144 (38.89%), Postives = 92/144 (63.89%), Query Frame = 1 
Query:    1 HGKHAMFSTEGVRLCFNYWEGRGHEVIGFMPEHYLNRKPN--PNAKTTMADHLERVDNPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHIDKAQEEKRGRVRYWLRQHCVSFAFAGSCFMPDPDFEFPK 426
            +G    FS   ++   +Y+  RG+EV+ F+P+ +++ K +  P    T+ ++ +  D+   L+  V+   + LTP  +YDDSY I YAK++N VIVT DR+NDHI+K +E +R + R ++R HC+SF F    F+P+PDF+FP+
Sbjct:  740 YGTTKKFSVSSLKKALDYYNQRGYEVVAFVPQSFISTKTSHEPKKNFTLFEYRDIADDLVGLQKLVEANLVSLTPPQDYDDSYAIHYAKKHNAVIVTNDRYNDHIEKQEESERPKFRKFIRDHCISFTFVRGEFLPNPDFKFPE 883
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BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Match: UPI0007114229 (hypothetical protein n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI0007114229)

HSP 1 Score: 128 bits (321), Expect = 1.610e-31
Identity = 63/160 (39.38%), Postives = 96/160 (60.00%), Query Frame = 1 
Query:    1 HGKHAMFSTEGVRLCFNYWEGRGHEVIGFMPEHYLNR----------KPNPNAKTTMADHLERV----DNPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHIDKAQEEKRGRV-RYWLRQHCVSFAFAGSCFMPDPDFEFPKPYQ 435
            HG H  FS  G++L   Y+E RGH+V+GF+PE+ ++           K      +   DH +R     D+ + L+    EG L L+PS +Y DSY I+YAK  NG+I+T DRFND I+K ++ K  R+ + WLR + +S++F G  F+P+PD+E P+ Y+
Sbjct:  546 HGCHLFFSVRGIQLVREYFEKRGHKVVGFVPEYCMDERNWSERWEAVKKKLKTGSVDEDHFDRSSSTPDDMEALKRLKREGVLSLSPSKDYSDSYAIEYAKTKNGIIITNDRFNDAINKIKDVKLKRITQRWLRTYVISYSFVGDDFIPNPDYEPPEYYE 705
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BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Match: A0A5D6YIX1_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YIX1_9STRA)

HSP 1 Score: 127 bits (318), Expect = 4.660e-31
Identity = 61/151 (40.40%), Postives = 92/151 (60.93%), Query Frame = 1 
Query:    1 HGKHAMFSTEGVRLCFNYWEGRGHEVIGFMPEHYLN------RKPNPNAKTTMADHLERVDNPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHID--KAQEEKRGRVRYWLRQHCVSFAFAGSCFMPDPDFEFPKP 429
            HG+H  FS  G+R+  +Y+  RGH V+GF+P+  L+      RK   +A T +    +  D+  LL+  VD+G LV TPS +YDDSYCIQYA   +G +VT D + DH++      E++  +R WL  H +SF +  + F+P+P+F +PKP
Sbjct:  804 HGQHRKFSCTGIRMACDYYLQRGHRVVGFLPDFLLDSEQVAARKRLASAGTDVPA-TKLPDDVPLLQKMVDDGVLVPTPSQDYDDSYCIQYAGMYDGCVVTNDMYRDHVEGMNGPRERKAAMRMWLVAHLISFTWVRNDFLPNPNFRYPKP 953
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BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Match: K3W6K7_GLOUD (RNase NYN domain-containing protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3W6K7_GLOUD)

HSP 1 Score: 114 bits (285), Expect = 4.570e-29
Identity = 52/145 (35.86%), Postives = 85/145 (58.62%), Query Frame = 1 
Query:    1 HGKHAMFSTEGVRLCFNYWEGRGHEVIGFMPEHYLNRKPNPNAKTTMADHLERV-----DNPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHIDK--AQEEKRGRVRYWLRQHCVSFAFAGSCFMPDPDF 414
            HG H  FS  G+RL   Y+  RGH V+GF+P++ +        K   +  ++       DN  LL+  V++G L+ TP+ +YDD+YCIQYA  ++G +VT D + DH++      E++  +R WL  H +S+ + G+ F+P+P+F
Sbjct:   39 HGFHKKFSCIGIRLAIEYFVQRGHRVVGFLPDYLVEGDQVGERKRMQSAGIDVPASKIPDNVALLQRLVEDGLLIPTPAQDYDDTYCIQYAGNHDGCVVTNDLYRDHVENMTGPRERKVAMRSWLTAHRISYTWVGNEFLPNPNF 183
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig100909.198.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4HMU4_9EUKA5.840e-5150.35Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A7S0NB25_9CHLO1.310e-4346.31Hypothetical protein n=1 Tax=Pyramimonas obovata T... [more]
L8H708_ACACA2.100e-4246.81RNase NYN domain-containing protein n=1 Tax=Acanth... [more]
UPI000644C6F72.580e-3444.06hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
F0Z9B4_DICPU2.750e-3444.93RNase NYN domain-containing protein n=1 Tax=Dictyo... [more]
D3B617_POLPP4.450e-3342.66RNase NYN domain-containing protein n=1 Tax=Polysp... [more]
A0A151Z3Z9_9MYCE9.780e-3238.89RNase NYN domain-containing protein n=1 Tax=Tieghe... [more]
UPI00071142291.610e-3139.38hypothetical protein n=1 Tax=Blastocystis sp. subt... [more]
A0A5D6YIX1_9STRA4.660e-3140.40Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
K3W6K7_GLOUD4.570e-2935.86RNase NYN domain-containing protein n=1 Tax=Globis... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig100909contigM-pyrifera_M_contig100909:6..500 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score135.6
Seed ortholog evalue1.9e-29
Seed eggNOG ortholog5786.XP_003284029.1
Preferred nameZC3H12C
KEGG koko:K18668
Hectar predicted targeting categoryother localisation
GOsGO:0000294,GO:0000932,GO:0000956,GO:0001101,GO:0001505,GO:0001558,GO:0001817,GO:0001818,GO:0001932,GO:0001933,GO:0001934,GO:0002230,GO:0002237,GO:0002253,GO:0002376,GO:0002429,GO:0002682,GO:0002683,GO:0002684,GO:0002694,GO:0002695,GO:0002697,GO:0002698,GO:0002757,GO:0002764,GO:0002768,GO:0002791,GO:0002792,GO:0002819,GO:0002820,GO:0002822,GO:0002823,GO:0002831,GO:0003674,GO:0003676,GO:0003677,GO:0003682,GO:0003723,GO:0003729,GO:0003730,GO:0003824,GO:0004518,GO:0004519,GO:0004521,GO:0004527,GO:0004532,GO:0004540,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005730,GO:0005737,GO:0005783,GO:0005789,GO:0005791,GO:0005856,GO:0006139,GO:0006355,GO:0006357,GO:0006401,GO:0006402,GO:0006417,GO:0006464,GO:0006508,GO:0006725,GO:0006807,GO:0006937,GO:0006942,GO:0006950,GO:0006974,GO:0006979,GO:0007154,GO:0007162,GO:0007165,GO:0007166,GO:0007346,GO:0008016,GO:0008150,GO:0008152,GO:0008285,GO:0009056,GO:0009057,GO:0009267,GO:0009314,GO:0009411,GO:0009416,GO:0009605,GO:0009607,GO:0009615,GO:0009617,GO:0009628,GO:0009635,GO:0009636,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009895,GO:0009896,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0009991,GO:0010033,GO:0010035,GO:0010468,GO:0010506,GO:0010508,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010564,GO:0010594,GO:0010595,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0010632,GO:0010634,GO:0010646,GO:0010647,GO:0010648,GO:0010656,GO:0010660,GO:0010883,GO:0010884,GO:0010941,GO:0010942,GO:0010948,GO:0012505,GO:0014070,GO:0016020,GO:0016032,GO:0016043,GO:0016070,GO:0016071,GO:0016579,GO:0016604,GO:0016605,GO:0016787,GO:0016788,GO:0017085,GO:0017091,GO:0017148,GO:0019048,GO:0019054,GO:0019219,GO:0019220,GO:0019222,GO:0019439,GO:0019538,GO:0019898,GO:0022407,GO:0022408,GO:0022603,GO:0022607,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030155,GO:0030162,GO:0030308,GO:0030334,GO:0030335,GO:0031090,GO:0031312,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031330,GO:0031331,GO:0031347,GO:0031348,GO:0031396,GO:0031397,GO:0031399,GO:0031400,GO:0031401,GO:0031667,GO:0031668,GO:0031669,GO:0031974,GO:0031981,GO:0031984,GO:0032088,GO:0032101,GO:0032102,GO:0032268,GO:0032269,GO:0032270,GO:0032386,GO:0032388,GO:0032434,GO:0032435,GO:0032496,GO:0032649,GO:0032651,GO:0032652,GO:0032675,GO:0032680,GO:0032689,GO:0032691,GO:0032692,GO:0032715,GO:0032720,GO:0032872,GO:0032874,GO:0032879,GO:0032880,GO:0032944,GO:0032945,GO:0032991,GO:0033157,GO:0033554,GO:0033993,GO:0034097,GO:0034248,GO:0034249,GO:0034599,GO:0034612,GO:0034641,GO:0034644,GO:0034655,GO:0035198,GO:0035613,GO:0035690,GO:0035770,GO:0035821,GO:0035925,GO:0036211,GO:0036464,GO:0040008,GO:0040012,GO:0040017,GO:0042127,GO:0042129,GO:0042130,GO:0042149,GO:0042175,GO:0042176,GO:0042177,GO:0042221,GO:0042306,GO:0042307,GO:0042325,GO:0042326,GO:0042327,GO:0042406,GO:0042493,GO:0042594,GO:0042981,GO:0043021,GO:0043022,GO:0043030,GO:0043031,GO:0043065,GO:0043066,GO:0043067,GO:0043068,GO:0043069,GO:0043122,GO:0043124,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043370,GO:0043371,GO:0043408,GO:0043410,GO:0043412,GO:0043433,GO:0043487,GO:0043488,GO:0043900,GO:0043901,GO:0043903,GO:0043933,GO:0044003,GO:0044057,GO:0044068,GO:0044085,GO:0044092,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044267,GO:0044270,GO:0044403,GO:0044419,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044788,GO:0044793,GO:0044827,GO:0044828,GO:0044877,GO:0045019,GO:0045069,GO:0045071,GO:0045428,GO:0045472,GO:0045580,GO:0045581,GO:0045595,GO:0045596,GO:0045597,GO:0045598,GO:0045600,GO:0045619,GO:0045620,GO:0045622,GO:0045623,GO:0045765,GO:0045766,GO:0045786,GO:0045822,GO:0045861,GO:0045862,GO:0045893,GO:0045926,GO:0045930,GO:0045932,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045944,GO:0045988,GO:0046483,GO:0046634,GO:0046636,GO:0046637,GO:0046639,GO:0046677,GO:0046685,GO:0046700,GO:0046822,GO:0046824,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048525,GO:0048583,GO:0048584,GO:0048585,GO:0050670,GO:0050672,GO:0050688,GO:0050691,GO:0050704,GO:0050706,GO:0050707,GO:0050708,GO:0050709,GO:0050710,GO:0050711,GO:0050713,GO:0050727,GO:0050728,GO:0050776,GO:0050777,GO:0050778,GO:0050779,GO:0050789,GO:0050792,GO:0050793,GO:0050794,GO:0050851,GO:0050852,GO:0050863,GO:0050865,GO:0050866,GO:0050868,GO:0050896,GO:0051046,GO:0051048,GO:0051049,GO:0051050,GO:0051051,GO:0051090,GO:0051093,GO:0051094,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051222,GO:0051223,GO:0051224,GO:0051239,GO:0051240,GO:0051241,GO:0051246,GO:0051247,GO:0051248,GO:0051249,GO:0051250,GO:0051252,GO:0051253,GO:0051254,GO:0051259,GO:0051270,GO:0051272,GO:0051701,GO:0051702,GO:0051704,GO:0051707,GO:0051716,GO:0051726,GO:0051817,GO:0051851,GO:0055117,GO:0055118,GO:0060147,GO:0060149,GO:0060255,GO:0060341,GO:0060548,GO:0060964,GO:0060965,GO:0060966,GO:0060967,GO:0060968,GO:0060969,GO:0061013,GO:0061014,GO:0061136,GO:0061157,GO:0061158,GO:0061980,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070201,GO:0070302,GO:0070304,GO:0070542,GO:0070555,GO:0070646,GO:0070647,GO:0070663,GO:0070664,GO:0070887,GO:0070920,GO:0071214,GO:0071216,GO:0071219,GO:0071222,GO:0071229,GO:0071236,GO:0071243,GO:0071310,GO:0071345,GO:0071347,GO:0071356,GO:0071362,GO:0071396,GO:0071398,GO:0071407,GO:0071478,GO:0071482,GO:0071496,GO:0071704,GO:0071840,GO:0080090,GO:0080134,GO:0080135,GO:0090085,GO:0090087,GO:0090257,GO:0090304,GO:0090305,GO:0090316,GO:0090501,GO:0090502,GO:0090503,GO:0097159,GO:0097237,GO:0097327,GO:0098586,GO:0098827,GO:0104004,GO:0140098,GO:1900015,GO:1900016,GO:1900117,GO:1900119,GO:1900165,GO:1900180,GO:1900182,GO:1900744,GO:1900745,GO:1901222,GO:1901223,GO:1901342,GO:1901360,GO:1901361,GO:1901363,GO:1901564,GO:1901575,GO:1901700,GO:1901701,GO:1901799,GO:1901987,GO:1901988,GO:1901990,GO:1901991,GO:1902074,GO:1902075,GO:1902105,GO:1902106,GO:1902531,GO:1902532,GO:1902533,GO:1902680,GO:1902713,GO:1902714,GO:1902806,GO:1902807,GO:1903003,GO:1903037,GO:1903038,GO:1903050,GO:1903051,GO:1903311,GO:1903313,GO:1903320,GO:1903321,GO:1903322,GO:1903362,GO:1903363,GO:1903426,GO:1903427,GO:1903506,GO:1903508,GO:1903522,GO:1903523,GO:1903530,GO:1903531,GO:1903555,GO:1903556,GO:1903706,GO:1903707,GO:1903798,GO:1903799,GO:1903827,GO:1903829,GO:1903900,GO:1903901,GO:1903935,GO:1903936,GO:1904018,GO:1904406,GO:1904467,GO:1904468,GO:1904589,GO:1904591,GO:1904636,GO:1904637,GO:1904950,GO:1904951,GO:1905952,GO:1905954,GO:1990868,GO:1990869,GO:1990904,GO:2000026,GO:2000045,GO:2000058,GO:2000059,GO:2000112,GO:2000113,GO:2000134,GO:2000145,GO:2000147,GO:2000316,GO:2000317,GO:2000319,GO:2000320,GO:2000377,GO:2000378,GO:2000379,GO:2000514,GO:2000515,GO:2000625,GO:2000627,GO:2000628,GO:2000630,GO:2001141
EggNOG free text desc.Zc3h12a-like Ribonuclease NYN domain
EggNOG OGs3X9FW@554915,KOG3777@1,KOG3777@2759
COG Functional cat.S
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01000,ko03019
Exons2
Model size447
Cds size432
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig100909.198.1prot_M-pyrifera_M_contig100909.198.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig100909 21..500 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815506.4319127-UTR-M-pyrifera_M_contig100909:5..201622815506.4319127-UTR-M-pyrifera_M_contig100909:5..20Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig100909 6..20 +
1692277442.153944-UTR-M-pyrifera_M_contig100909:5..201692277442.153944-UTR-M-pyrifera_M_contig100909:5..20Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig100909 6..20 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815506.4438076-CDS-M-pyrifera_M_contig100909:20..2301622815506.4438076-CDS-M-pyrifera_M_contig100909:20..230Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100909 21..230 +
1692277442.1740665-CDS-M-pyrifera_M_contig100909:20..2301692277442.1740665-CDS-M-pyrifera_M_contig100909:20..230Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100909 21..230 +
1622815506.4539177-CDS-M-pyrifera_M_contig100909:278..5001622815506.4539177-CDS-M-pyrifera_M_contig100909:278..500Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100909 279..500 +
1692277442.1848037-CDS-M-pyrifera_M_contig100909:278..5001692277442.1848037-CDS-M-pyrifera_M_contig100909:278..500Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig100909 279..500 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig100909.198.1

>prot_M-pyrifera_M_contig100909.198.1 ID=prot_M-pyrifera_M_contig100909.198.1|Name=mRNA_M-pyrifera_M_contig100909.198.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=144bp
MFSTEGVRLCFNYWEGRGHEVIGFMPEHYLNRKPNPNAKTTMADHLERVD
NPDLLRHYVDEGKLVLTPSWNYDDSYCIQYAKQNNGVIVTKDRFNDHIDK
AQEEKRGRVRYWLRQHCVSFAFAGSCFMPDPDFEFPKPYQGKK*
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mRNA from alignment at M-pyrifera_M_contig100909:6..500+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig100909.198.1 ID=mRNA_M-pyrifera_M_contig100909.198.1|Name=mRNA_M-pyrifera_M_contig100909.198.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=495bp|location=Sequence derived from alignment at M-pyrifera_M_contig100909:6..500+ (Macrocystis pyrifera P11B4 male)
CATGGCAAGCATGCCATGTTTTCGACGGAGGGAGTGAGGCTCTGCTTCAA
CTATTGGGAAGGCAGGGGGCATGAGGTCATTGGGTTTATGCCGGAGCACT
ACCTCAACAGGAAGCCCAACCCCAACGCCAAGACTACCATGGCAGACCAC
CTTGAGCGAGTGGATAACCCAGACCTCCTACGCCATTATGTTGACGAAGG
AAAGCTCGTGCTGACACCATCTTGGGTACTACCTCCCACACCCACCGCGC
TGAATCTCTACTGACAGGTGCAGAATTACGATGACAGCTACTGCATCCAA
TACGCCAAGCAGAACAACGGAGTGATTGTCACAAAAGATCGCTTCAACGA
CCACATTGATAAGGCGCAAGAGGAGAAGCGGGGTAGAGTGCGCTATTGGC
TCCGTCAACACTGCGTTTCCTTTGCCTTCGCAGGCTCCTGCTTCATGCCG
GACCCTGACTTCGAGTTCCCGAAGCCCTACCAAGGGAAGAAGTAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig100909:6..500+

>mRNA_M-pyrifera_M_contig100909.198.1 ID=mRNA_M-pyrifera_M_contig100909.198.1|Name=mRNA_M-pyrifera_M_contig100909.198.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=864bp|location=Sequence derived from alignment at M-pyrifera_M_contig100909:6..500+ (Macrocystis pyrifera P11B4 male)
ATGTTTTCGACGGAGGGAGTGAGGCTCTGCTTCAACTATTGGGAAGGCAG
GGGGCATGAGGTCATTGGGTTTATGCCGGAGCACTACCTCAACAGGAAGC
CCAACCCCAACGCCAAGACTACCATGGCAGACCACCTTGAGCGAGTGGAT
AACCCAGACCTCCTACGCCATTATGTTGACGAAGGAAAGCTCGTGCTGAC
ACCATCTTGGATGTTTTCGACGGAGGGAGTGAGGCTCTGCTTCAACTATT
GGGAAGGCAGGGGGCATGAGGTCATTGGGTTTATGCCGGAGCACTACCTC
AACAGGAAGCCCAACCCCAACGCCAAGACTACCATGGCAGACCACCTTGA
GCGAGTGGATAACCCAGACCTCCTACGCCATTATGTTGACGAAGGAAAGC
TCGTGCTGACACCATCTTGGAATTACGATGACAGCTACTGCATCCAATAC
GCCAAGCAGAACAACGGAGTGATTGTCACAAAAGATCGCTTCAACGACCA
CATTGATAAGGCGCAAGAGGAGAAGCGGGGTAGAGTGCGCTATTGGCTCC
GTCAACACTGCGTTTCCTTTGCCTTCGCAGGCTCCTGCTTCATGCCGGAC
CCTGACTTCGAGTTCCCGAAGCCCTACCAAGGGAAGAAGTAGAATTACGA
TGACAGCTACTGCATCCAATACGCCAAGCAGAACAACGGAGTGATTGTCA
CAAAAGATCGCTTCAACGACCACATTGATAAGGCGCAAGAGGAGAAGCGG
GGTAGAGTGCGCTATTGGCTCCGTCAACACTGCGTTTCCTTTGCCTTCGC
AGGCTCCTGCTTCATGCCGGACCCTGACTTCGAGTTCCCGAAGCCCTACC
AAGGGAAGAAGTAG
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