mRNA_M-pyrifera_M_contig84950.19797.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84950.19797.1
Unique NamemRNA_M-pyrifera_M_contig84950.19797.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
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BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Match: A0A7S4M5G5_9EUKA (Hypothetical protein n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M5G5_9EUKA)

HSP 1 Score: 355 bits (912), Expect = 2.140e-123
Identity = 168/193 (87.05%), Postives = 182/193 (94.30%), Query Frame = 1 
Query:    1 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVSLEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRRAKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGCYA 579
            PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNC+HL SLEKEQISSEALEASRI+CNKYI K +GKDSFHMRIRVHP+HVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARV IGQIL+SVRCR+ AVP V EA+RRAKYKFPGRQ+I ++ KWGFTRFS+EEY  LK+EG+I+PDGCYA
Sbjct:    5 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCIHLCSLEKEQISSEALEASRIACNKYIVKNSGKDSFHMRIRVHPYHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVRIGQILLSVRCRNSAVPHVWEALRRAKYKFPGRQKIVQTDKWGFTRFSKEEYTTLKKEGKIIPDGCYA 197
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BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Match: A0A8J4PPY7_9MYCE (Ribosomal_L16 domain-containing protein n=1 Tax=Polysphondylium violaceum TaxID=133409 RepID=A0A8J4PPY7_9MYCE)

HSP 1 Score: 319 bits (817), Expect = 8.460e-109
Identity = 150/191 (78.53%), Postives = 167/191 (87.43%), Query Frame = 1 
Query:    1 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVSLEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRRAKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGC 573
            PARCYRYCKNKPYIKSRYCRGVPDAK+RI+DLGRKKAS D+FP C HL+SLEKEQISSEA+EA RISCNKYI+K  GKDSFHMR+RVHP+HVLRINKMLSCAGADRLQTGMRGAFGKP G VARV+IGQI+ S+RC+D     VLEA+RR+ YKFPGRQ+I  SKKWGFT F RE Y RLK EGR++ DG 
Sbjct:    5 PARCYRYCKNKPYIKSRYCRGVPDAKIRIFDLGRKKASTDEFPYCAHLISLEKEQISSEAIEAGRISCNKYISKMGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGKPMGTVARVDIGQIIFSIRCKDSVSNHVLEALRRSSYKFPGRQKIVVSKKWGFTSFDRETYQRLKSEGRLMNDGA 195
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BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Match: A0A163K1W7_ABSGL (Ribosomal_L16 domain-containing protein n=3 Tax=Cunninghamellaceae TaxID=4851 RepID=A0A163K1W7_ABSGL)

HSP 1 Score: 318 bits (814), Expect = 2.340e-108
Identity = 148/192 (77.08%), Postives = 169/192 (88.02%), Query Frame = 1 
Query:    1 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVSLEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRRAKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGCY 576
            PARCYRYCKNKPY KSRYCRGVPDAK+RIYDLGRKKA +DDFP C+HLVS E EQ+S+EALEA RI CNKY+TKT+GKDSFHMRIRVHPFHV+RINKMLSCAGADRLQTGMRGAFGKP GLVARVNIGQI+ SVR +D     V+EA+RR KYKFPG+Q+I  SKKWGFT  +RE+Y+  + EG+++PDGCY
Sbjct:    5 PARCYRYCKNKPYPKSRYCRGVPDAKIRIYDLGRKKAHVDDFPLCIHLVSNEYEQLSAEALEAGRICCNKYMTKTSGKDSFHMRIRVHPFHVVRINKMLSCAGADRLQTGMRGAFGKPNGLVARVNIGQIIFSVRTKDSNKATVIEALRRCKYKFPGQQKIIISKKWGFTPLAREDYVTARAEGKLLPDGCY 196
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BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Match: A0A151ZG94_9MYCE (S60 ribosomal protein L10 n=1 Tax=Tieghemostelium lacteum TaxID=361077 RepID=A0A151ZG94_9MYCE)

HSP 1 Score: 317 bits (812), Expect = 5.060e-108
Identity = 147/191 (76.96%), Postives = 167/191 (87.43%), Query Frame = 1 
Query:    1 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVSLEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRRAKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGC 573
            PARCYRYCKNKPYIKSRYCRGVPDAK+RI+DLGRKKAS ++FP C HL+SLEKEQ+SSEA+EA RISCNKYI+K  GKDSFHMR+RVHP+HVLRINKMLSCAGADRLQTGMRGAFGKP G VARV IGQI+ S+RC+D     VLEA RR+ YKFPGRQ+I  SKKWGFT F REE+L+LK +GR++ DG 
Sbjct:    5 PARCYRYCKNKPYIKSRYCRGVPDAKIRIFDLGRKKASTEEFPYCAHLISLEKEQLSSEAIEAGRISCNKYISKFGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGKPMGTVARVEIGQIIFSIRCKDSISEHVLEAFRRSSYKFPGRQKIVVSKKWGFTNFDREEFLKLKADGRVINDGA 195
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BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Match: RL10_DICDI (60S ribosomal protein L10 n=1 Tax=Dictyostelium discoideum TaxID=44689 RepID=RL10_DICDI)

HSP 1 Score: 317 bits (811), Expect = 6.940e-108
Identity = 147/191 (76.96%), Postives = 170/191 (89.01%), Query Frame = 1 
Query:    1 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVSLEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRRAKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGC 573
            PARCYRYCKNKPYIKSRYCRGVPDAK+RI+DLGRKKAS D+FP C+HL+SLEKEQ+SSEA+EA RISCNKYI+KT GKDSFHMR+RVHP+HVLRINKMLSCAGADRLQTGMRGAFGKP G VARVNIGQI+ S+R RD  +  V+EA+RR+ YKFPGRQ+I  SKKWGFT ++RE Y +LK +GR++ DG 
Sbjct:    5 PARCYRYCKNKPYIKSRYCRGVPDAKIRIFDLGRKKASTDEFPLCVHLISLEKEQLSSEAIEAGRISCNKYISKTGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGKPMGTVARVNIGQIIFSIRTRDNMLANVVEALRRSSYKFPGRQKIVVSKKWGFTAYNREAYQKLKADGRLMNDGA 195
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BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Match: L8GXX4_ACACA (Ribosomal protein L10, putative n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GXX4_ACACA)

HSP 1 Score: 316 bits (810), Expect = 7.210e-108
Identity = 152/193 (78.76%), Postives = 167/193 (86.53%), Query Frame = 1 
Query:    1 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVSLEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRRAKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGCYA 579
            PARCYRYCKNKPYIKSRYCRGVP+ KLRIYDLGRKKA +D+FP   HL+S E EQISSEALEA+RISCNKYITK AGKDSFHMR+RVHP+H+LRINKMLSCAGADRLQTGMRGAFGKP G VARV IGQIL SVR +D +   V+EA+RRAKYKFPGRQ+I  S KWGFT   REEYL+LK EGRI+PDG  A
Sbjct:    5 PARCYRYCKNKPYIKSRYCRGVPEPKLRIYDLGRKKAGVDEFPFVAHLLSWEHEQISSEALEAARISCNKYITKMAGKDSFHMRVRVHPYHILRINKMLSCAGADRLQTGMRGAFGKPAGCVARVKIGQILFSVRSKDNSKAHVIEALRRAKYKFPGRQKIVLSNKWGFTPLQREEYLQLKSEGRIIPDGVNA 197
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BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Match: A0A4P9ZZ11_9FUNG (60S ribosomal protein L10-A n=2 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4P9ZZ11_9FUNG)

HSP 1 Score: 313 bits (803), Expect = 1.070e-106
Identity = 145/192 (75.52%), Postives = 169/192 (88.02%), Query Frame = 1 
Query:    1 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVSLEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRRAKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGCY 576
            PARCYRYCKNKPY KSR+CRGVPDAK+RIYDLGRKKA +D+FP C+HLVS E EQ+SSEALEA+RI  NKYITK +GKDSFH+R+RVHPFHV+RINKMLSCAGADRLQTGMRGAFGKP G+VARVNIGQ+L SVR +D     V+EA+RRAKYKFPGRQ+I  SKKWGFT+ SRE+Y+  ++ G++ PDGCY
Sbjct:    5 PARCYRYCKNKPYPKSRFCRGVPDAKIRIYDLGRKKAGVDEFPLCVHLVSNEYEQLSSEALEAARICANKYITKMSGKDSFHLRVRVHPFHVVRINKMLSCAGADRLQTGMRGAFGKPNGVVARVNIGQVLFSVRTKDSNKAVVIEALRRAKYKFPGRQKIILSKKWGFTKLSREDYIEARQAGQLQPDGCY 196
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BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Match: F0ZVU0_DICPU (Ribosomal protein L10E n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZVU0_DICPU)

HSP 1 Score: 312 bits (800), Expect = 3.280e-106
Identity = 146/191 (76.44%), Postives = 170/191 (89.01%), Query Frame = 1 
Query:    1 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVSLEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRRAKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGC 573
            PARCYRY KNKPYIKSRYCRGVPDAK+RI+DLGRKKA+  DFP C+HL+SLEKEQ+SSE++EA RISCNKYI+KT GKDSFHMR+RVHP+HVLRINKMLSCAGADRLQTGMRGAFGKP G VARV+IGQI+ S+R +D  +  V+EA+RR+ YKFPGRQ+I  SKKWGFT F REE+L+LKEEGR++ DG 
Sbjct:    5 PARCYRYQKNKPYIKSRYCRGVPDAKIRIFDLGRKKAAAIDFPLCVHLISLEKEQLSSESIEAGRISCNKYISKTGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAFGKPMGTVARVDIGQIIFSIRTKDSMLANVIEALRRSSYKFPGRQKIVISKKWGFTHFDREEFLKLKEEGRLMNDGA 195
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BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Match: A0A8H7RY37_9FUNG (Ribosomal_L16 domain-containing protein n=2 Tax=Mucor circinatus TaxID=2054153 RepID=A0A8H7RY37_9FUNG)

HSP 1 Score: 312 bits (800), Expect = 3.770e-106
Identity = 145/192 (75.52%), Postives = 169/192 (88.02%), Query Frame = 1 
Query:    1 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVSLEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRRAKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGCY 576
            PARCYRYCKNKPY KSRY RGVPDAK+RI+DLGRKKA +DDFP C+HLVS E EQI++EALEA+RISCNKYI KT+GKDSFH+R+RVHPFHV+RINKMLSCAGADRLQTGMRGAFGKP GLVARVNIGQ++ SVR R+   P V+EA+RR KYKFPG+Q+I  SKKWGFT   REEY++ +++G + PDGCY
Sbjct:   10 PARCYRYCKNKPYPKSRYNRGVPDAKIRIFDLGRKKAHVDDFPLCIHLVSNEYEQITAEALEAARISCNKYIVKTSGKDSFHLRVRVHPFHVVRINKMLSCAGADRLQTGMRGAFGKPNGLVARVNIGQVIFSVRSRESNRPVVMEALRRCKYKFPGQQKIIVSKKWGFTPLGREEYVQARKDGMLQPDGCY 201
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BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Match: F4PJ98_CAVFA (S60 ribosomal protein L10 n=1 Tax=Cavenderia fasciculata (strain SH3) TaxID=1054147 RepID=F4PJ98_CAVFA)

HSP 1 Score: 310 bits (794), Expect = 2.690e-105
Identity = 144/191 (75.39%), Postives = 166/191 (86.91%), Query Frame = 1 
Query:    1 PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVSLEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLSCAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRRAKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGC 573
            PARCYRYCKNKPYIKSRYCRGVPDAK++IYDLGRKKAS ++FP C HL+SLEKEQ+SSEALEA RISCNKYITK  GKDSFHMR+RVHP+HVLRINKMLSCAGADRLQTGMRGA+GKP GL ARV IGQI+ S+RC+D     ++EA+RR+ YKFPGRQ+I  SKKWGFT+++REE+  LK   R+V DG 
Sbjct:    5 PARCYRYCKNKPYIKSRYCRGVPDAKIKIYDLGRKKASTEEFPFCAHLISLEKEQLSSEALEAGRISCNKYITKVGGKDSFHMRVRVHPWHVLRINKMLSCAGADRLQTGMRGAYGKPLGLCARVEIGQIIFSIRCKDGMSNHIIEALRRSSYKFPGRQKIVISKKWGFTKYNREEFKELKATNRVVNDGA 195
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84950.19797.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7S4M5G5_9EUKA2.140e-12387.05Hypothetical protein n=1 Tax=Vannella sp. CB-2014 ... [more]
A0A8J4PPY7_9MYCE8.460e-10978.53Ribosomal_L16 domain-containing protein n=1 Tax=Po... [more]
A0A163K1W7_ABSGL2.340e-10877.08Ribosomal_L16 domain-containing protein n=3 Tax=Cu... [more]
A0A151ZG94_9MYCE5.060e-10876.96S60 ribosomal protein L10 n=1 Tax=Tieghemostelium ... [more]
RL10_DICDI6.940e-10876.9660S ribosomal protein L10 n=1 Tax=Dictyostelium di... [more]
L8GXX4_ACACA7.210e-10878.76Ribosomal protein L10, putative n=1 Tax=Acanthamoe... [more]
A0A4P9ZZ11_9FUNG1.070e-10675.5260S ribosomal protein L10-A n=2 Tax=Dimargaris cri... [more]
F0ZVU0_DICPU3.280e-10676.44Ribosomal protein L10E n=1 Tax=Dictyostelium purpu... [more]
A0A8H7RY37_9FUNG3.770e-10675.52Ribosomal_L16 domain-containing protein n=2 Tax=Mu... [more]
F4PJ98_CAVFA2.690e-10575.39S60 ribosomal protein L10 n=1 Tax=Cavenderia fasci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84950contigM-pyrifera_M_contig84950:291..869 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score321.2
Seed ortholog evalue3.2e-85
Seed eggNOG ortholog44689.DDB0231191
Preferred nameRPL10L
KEGG koko:K02866
KEGG Pathwayko03010,map03010
KEGG ModuleM00177,M00179
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000027,GO:0002181,GO:0002252,GO:0002376,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003735,GO:0005198,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0005737,GO:0005773,GO:0005774,GO:0005783,GO:0005789,GO:0005791,GO:0005829,GO:0005840,GO:0005844,GO:0006412,GO:0006415,GO:0006417,GO:0006518,GO:0006807,GO:0006950,GO:0006952,GO:0006996,GO:0007275,GO:0007276,GO:0007283,GO:0007399,GO:0007417,GO:0007420,GO:0008150,GO:0008152,GO:0009058,GO:0009059,GO:0009314,GO:0009411,GO:0009416,GO:0009507,GO:0009526,GO:0009536,GO:0009605,GO:0009607,GO:0009615,GO:0009628,GO:0009790,GO:0009889,GO:0009941,GO:0009987,GO:0010224,GO:0010467,GO:0010468,GO:0010556,GO:0010608,GO:0012505,GO:0015934,GO:0016020,GO:0016043,GO:0019222,GO:0019538,GO:0019953,GO:0022411,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0022625,GO:0022626,GO:0030867,GO:0031090,GO:0031323,GO:0031326,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0031984,GO:0032268,GO:0032501,GO:0032502,GO:0032504,GO:0032984,GO:0032991,GO:0034248,GO:0034622,GO:0034641,GO:0034644,GO:0034645,GO:0036477,GO:0042175,GO:0042254,GO:0042255,GO:0042273,GO:0042788,GO:0043025,GO:0043043,GO:0043170,GO:0043207,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044085,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044297,GO:0044391,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044432,GO:0044434,GO:0044435,GO:0044437,GO:0044444,GO:0044445,GO:0044446,GO:0044464,GO:0044703,GO:0045182,GO:0048232,GO:0048513,GO:0048568,GO:0048609,GO:0048731,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051171,GO:0051246,GO:0051607,GO:0051704,GO:0051707,GO:0051716,GO:0060255,GO:0060322,GO:0065003,GO:0065007,GO:0070013,GO:0070925,GO:0071214,GO:0071478,GO:0071482,GO:0071493,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0097159,GO:0097458,GO:0098542,GO:0098552,GO:0098554,GO:0098556,GO:0098562,GO:0098588,GO:0098805,GO:0098827,GO:0104004,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1990403,GO:1990904,GO:2000112
EggNOG free text desc.ribosomal protein
EggNOG OGs3X8HH@554915,COG0197@1,KOG0857@2759
COG Functional cat.J
Best tax levelAmoebozoa
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons1
Model size579
Cds size579
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816757.2178805-CDS-M-pyrifera_M_contig84950:290..8691622816757.2178805-CDS-M-pyrifera_M_contig84950:290..869Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84950 291..869 +
1692278160.3601012-CDS-M-pyrifera_M_contig84950:290..8691692278160.3601012-CDS-M-pyrifera_M_contig84950:290..869Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84950 291..869 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84950.19797.1prot_M-pyrifera_M_contig84950.19797.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84950 291..869 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84950.19797.1

>prot_M-pyrifera_M_contig84950.19797.1 ID=prot_M-pyrifera_M_contig84950.19797.1|Name=mRNA_M-pyrifera_M_contig84950.19797.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
PARCYRYCKNKPYIKSRYCRGVPDAKLRIYDLGRKKASIDDFPNCLHLVS
LEKEQISSEALEASRISCNKYITKTAGKDSFHMRIRVHPFHVLRINKMLS
CAGADRLQTGMRGAFGKPQGLVARVNIGQILISVRCRDQAVPAVLEAMRR
AKYKFPGRQRIAKSKKWGFTRFSREEYLRLKEEGRIVPDGCYA
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mRNA from alignment at M-pyrifera_M_contig84950:291..869+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84950.19797.1 ID=mRNA_M-pyrifera_M_contig84950.19797.1|Name=mRNA_M-pyrifera_M_contig84950.19797.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=579bp|location=Sequence derived from alignment at M-pyrifera_M_contig84950:291..869+ (Macrocystis pyrifera P11B4 male)
CCGGCCAGGTGCTACAGGTACTGCAAGAACAAGCCCTACATCAAGTCTCG
CTACTGCCGTGGTGTGCCTGATGCCAAGCTGAGGATCTACGACCTCGGTC
GCAAGAAGGCCAGCATCGACGACTTCCCCAACTGCCTGCACTTGGTCTCT
CTGGAGAAGGAGCAGATCTCGAGCGAGGCTCTGGAGGCTTCCCGCATTTC
CTGCAACAAGTACATCACAAAGACTGCAGGAAAGGACTCTTTCCACATGA
GGATTCGTGTGCACCCCTTCCACGTGCTCCGTATCAACAAGATGCTTTCG
TGCGCTGGAGCTGATAGGCTCCAGACTGGTATGAGGGGTGCCTTCGGCAA
GCCTCAGGGTCTCGTCGCCCGTGTCAACATCGGACAGATTCTTATCTCCG
TCCGCTGCCGTGACCAGGCCGTGCCTGCCGTGCTTGAGGCCATGCGCCGT
GCCAAGTACAAGTTCCCTGGCCGCCAGAGGATCGCCAAGTCCAAGAAGTG
GGGATTCACCCGCTTCTCCAGGGAGGAGTACCTTCGCCTCAAGGAGGAGG
GACGCATCGTTCCCGATGGCTGCTACGCC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84950:291..869+

>mRNA_M-pyrifera_M_contig84950.19797.1 ID=mRNA_M-pyrifera_M_contig84950.19797.1|Name=mRNA_M-pyrifera_M_contig84950.19797.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1158bp|location=Sequence derived from alignment at M-pyrifera_M_contig84950:291..869+ (Macrocystis pyrifera P11B4 male)
CCGGCCAGGTGCTACAGGTACTGCAAGAACAAGCCCTACATCAAGTCTCG
CTACTGCCGTGGTGTGCCTGATGCCAAGCTGAGGATCTACGACCTCGGTC
GCAAGAAGGCCAGCATCGACGACTTCCCCAACTGCCTGCACTTGGTCTCT
CTGGAGAAGGAGCAGATCTCGAGCGAGGCTCTGGAGGCTTCCCGCATTTC
CTGCAACAAGTACATCACAAAGACTGCAGGAAAGGACTCTTTCCACATGA
GGATTCGTGTGCACCCCTTCCACGTGCTCCGTATCAACAAGATGCTTTCG
TGCGCTGGAGCTGATAGGCTCCAGACTGGTATGAGGGGTGCCTTCGGCAA
GCCTCAGGGTCTCGTCGCCCGTGTCAACATCGGACAGATTCTTATCTCCG
TCCGCTGCCGTGACCAGGCCGTGCCTGCCGTGCTTGAGGCCATGCGCCGT
GCCAAGTACAAGTTCCCTGGCCGCCAGAGGATCGCCAAGTCCAAGAAGTG
GGGATTCACCCGCTTCTCCAGGGAGGAGTACCTTCGCCTCAAGGAGGAGG
GACGCATCGTTCCCGATGGCTGCTACGCCCCGGCCAGGTGCTACAGGTAC
TGCAAGAACAAGCCCTACATCAAGTCTCGCTACTGCCGTGGTGTGCCTGA
TGCCAAGCTGAGGATCTACGACCTCGGTCGCAAGAAGGCCAGCATCGACG
ACTTCCCCAACTGCCTGCACTTGGTCTCTCTGGAGAAGGAGCAGATCTCG
AGCGAGGCTCTGGAGGCTTCCCGCATTTCCTGCAACAAGTACATCACAAA
GACTGCAGGAAAGGACTCTTTCCACATGAGGATTCGTGTGCACCCCTTCC
ACGTGCTCCGTATCAACAAGATGCTTTCGTGCGCTGGAGCTGATAGGCTC
CAGACTGGTATGAGGGGTGCCTTCGGCAAGCCTCAGGGTCTCGTCGCCCG
TGTCAACATCGGACAGATTCTTATCTCCGTCCGCTGCCGTGACCAGGCCG
TGCCTGCCGTGCTTGAGGCCATGCGCCGTGCCAAGTACAAGTTCCCTGGC
CGCCAGAGGATCGCCAAGTCCAAGAAGTGGGGATTCACCCGCTTCTCCAG
GGAGGAGTACCTTCGCCTCAAGGAGGAGGGACGCATCGTTCCCGATGGCT
GCTACGCC
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