mRNA_M-pyrifera_M_contig84906.19789.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84906.19789.1
Unique NamemRNA_M-pyrifera_M_contig84906.19789.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Match: A0A1Y2D540_9FUNG (HIT-like protein n=1 Tax=Rhizoclosmatium globosum TaxID=329046 RepID=A0A1Y2D540_9FUNG)

HSP 1 Score: 91.7 bits (226), Expect = 9.590e-21
Identity = 50/105 (47.62%), Postives = 62/105 (59.05%), Query Frame = 1
Query:    7 FGFGPYKVDVAHQIIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGHLTEKEARDLGEMLWRGVVVTRALHKCPAVLLAIQDGALAGQTVPHSHLHVIPRWRGD 321
            F FGPY +  A +I  S   V   VNLKPV PGH L++ RR VPR   LT  EA DL     R   V    +K  ++ + +QDG  AGQTVPH H+HV+PR +GD
Sbjct:    4 FKFGPYPIS-ASEIFYSTRNVFGLVNLKPVTPGHVLIIPRRVVPRFADLTTAEAHDLVIAAQRVGKVVEREYKGESLTITVQDGPAAGQTVPHVHIHVMPRRKGD 107          
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Match: A0A699YXQ0_HAELA (HIT domain-containing protein (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699YXQ0_HAELA)

HSP 1 Score: 90.5 bits (223), Expect = 1.000e-20
Identity = 50/107 (46.73%), Postives = 63/107 (58.88%), Query Frame = 1
Query:    1 KEFGFGPYKVDVAHQIIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGHLTEKEARDLGEMLWRGVVVTRALHKCPAVLLAIQDGALAGQTVPHSHLHVIPRWRGD 321
            K++ FGP+ V  A+++  +      FVNLKPVVPGH LV   R VPR   LT  E  D+  +  R         K  ++ LAIQDG LAGQTVPH H+HV+PR  GD
Sbjct:    8 KDYKFGPWTVH-AYEVFAATELSYAFVNLKPVVPGHVLVSPARVVPRFNDLTAAEVTDMWLLAQRVGAAVERHFKASSLTLAIQDGPLAGQTVPHVHIHVLPRRAGD 113          
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Match: A0A7S2GEV3_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GEV3_9STRA)

HSP 1 Score: 89.4 bits (220), Expect = 3.320e-20
Identity = 50/105 (47.62%), Postives = 67/105 (63.81%), Query Frame = 1
Query:   13 FGPYKVDVAHQ--IIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGHLTEKEARDLGEMLWRGVVVTRAL----HKCPAVLLAIQDGALAGQTVPHSHLHVIPR 309
            FGPY +  + Q  I  SG+  V FVNLKP+VPGH LV+ RR VP++  LTE+E  DL    W  V+  R++    H C    + +QDGA AGQ+VPH H+H++PR
Sbjct:   41 FGPYVLSPSQQFYISPSGLS-VGFVNLKPLVPGHVLVIPRRNVPKLVDLTEEELVDL----WSSVMEVRSIVLRFHGCAGAEIGVQDGADAGQSVPHVHVHILPR 140          
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Match: D8ULT2_VOLCA (Bis(5'-adenosyl)-triphosphatase (Fragment) n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8ULT2_VOLCA)

HSP 1 Score: 88.2 bits (217), Expect = 1.720e-19
Identity = 49/105 (46.67%), Postives = 62/105 (59.05%), Query Frame = 1
Query:    7 FGFGPYKVDVAHQIIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGHLTEKEARDLGEMLWRGVVVTRALHKCPAVLLAIQDGALAGQTVPHSHLHVIPRWRGD 321
            + FGP+ +  +H  + S +    FVNLKPVVPGH LV  +R V R   LT  E  DL  +  R      A +   ++ LAIQDGA AGQTVPH H+HV+PR  GD
Sbjct:    1 YKFGPHTIPGSHVFVLSNL-CYGFVNLKPVVPGHVLVSTKRVVQRFTDLTPDEVSDLWLLAQRIGKTVEAHYGAQSLTLAIQDGAFAGQTVPHVHIHVLPRKAGD 104          
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Match: A0A4T0FH95_9BASI (HIT domain-containing protein n=1 Tax=Wallemia hederae TaxID=1540922 RepID=A0A4T0FH95_9BASI)

HSP 1 Score: 87.8 bits (216), Expect = 2.310e-19
Identity = 45/100 (45.00%), Postives = 63/100 (63.00%), Query Frame = 1
Query:   22 YKVDVAHQIIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGHLTEKEARDLGEMLWRGVVVTRALHKCPAVLLAIQDGALAGQTVPHSHLHVIPRWRGD 321
            +K D+  Q+       V FVNLKP+VPGH LV+ RR+V +   L+ +E  DL   + R   V   + K  A+ ++IQDG  AGQTVPH+H+HV+PR +GD
Sbjct:    8 HKFDITTQVFYRSKLSVAFVNLKPIVPGHVLVIPRRKVEKFTELSAEEVCDLFLSVQRVGKVVEGVFKSTALTVSIQDGIDAGQTVPHTHVHVLPRKQGD 107          
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Match: UPI001262E65C (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like n=1 Tax=Pistacia vera TaxID=55513 RepID=UPI001262E65C)

HSP 1 Score: 88.6 bits (218), Expect = 2.340e-19
Identity = 47/105 (44.76%), Postives = 62/105 (59.05%), Query Frame = 1
Query:    7 FGFGPYKVDVAHQIIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGHLTEKEARDLGEMLWRGVVVTRALHKCPAVLLAIQDGALAGQTVPHSHLHVIPRWRGD 321
            + FGPYK+D A ++  S       VNL+PVVPGH L+V +R V R+  LT  E  DL  M  +      + HK  ++   IQDG  AGQTVPH H+H++PR  GD
Sbjct:   41 YKFGPYKID-AKEVFYSTNLSFAMVNLRPVVPGHVLIVPKREVKRLVDLTADETSDLWLMAQKVGKQLESYHKASSLTFTIQDGPEAGQTVPHVHIHILPRKSGD 144          
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Match: UPI0009AB7177 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT n=2 Tax=Prunus TaxID=3754 RepID=UPI0009AB7177)

HSP 1 Score: 88.2 bits (217), Expect = 3.300e-19
Identity = 49/107 (45.79%), Postives = 61/107 (57.01%), Query Frame = 1
Query:    1 KEFGFGPYKVDVAHQIIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGHLTEKEARDLGEMLWRGVVVTRALHKCPAVLLAIQDGALAGQTVPHSHLHVIPRWRGD 321
            ++F FGPYK+D + ++  S       VNL+PVVPGH LV  RR V R   LT  E  DL     +        HK  ++ L IQDG  AGQTVPH H+H+IPR  GD
Sbjct:   39 EQFTFGPYKID-SREVFYSTHLSYALVNLRPVVPGHVLVCPRREVKRFVDLTTDETSDLWIAAQKVGSRLETYHKASSLTLTIQDGPQAGQTVPHVHIHIIPRKGGD 144          
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Match: A0A163CY42_PHYB8 (Bis(5'-adenosyl)-triphosphatase n=1 Tax=Phycomyces blakesleeanus (strain ATCC 8743b / DSM 1359 / FGSC 10004 / NBRC 33097 / NRRL 1555) TaxID=763407 RepID=A0A163CY42_PHYB8)

HSP 1 Score: 87.0 bits (214), Expect = 4.080e-19
Identity = 46/105 (43.81%), Postives = 63/105 (60.00%), Query Frame = 1
Query:    7 FGFGPYKVDVAHQIIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGHLTEKEARDLGEMLWRGVVVTRALHKCPAVLLAIQDGALAGQTVPHSHLHVIPRWRGD 321
            + FGP+K+  +    RS    +  VNLKP+  GH LV+ +R VPR+  LTE+EA D+     +   V     K  ++ + IQDG  AGQTVPH H+HVIPR +GD
Sbjct:    7 YSFGPHKIPESQVFYRSKF-CLGLVNLKPITSGHVLVITKRVVPRMRDLTEEEAEDMMISAQKVGRVVEKFFKGTSLTMTIQDGPQAGQTVPHVHMHVIPRIKGD 110          
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Match: UPI0010A9F8A4 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT n=1 Tax=Malus domestica TaxID=3750 RepID=UPI0010A9F8A4)

HSP 1 Score: 86.7 bits (213), Expect = 5.620e-19
Identity = 48/107 (44.86%), Postives = 61/107 (57.01%), Query Frame = 1
Query:    1 KEFGFGPYKVDVAHQIIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGHLTEKEARDLGEMLWRGVVVTRALHKCPAVLLAIQDGALAGQTVPHSHLHVIPRWRGD 321
            + F FGPY +D + ++  S       VNL+P+VPGH LV  RR V R   LT  E  DL     R      + HK  ++ LAIQDG  AGQTVPH H+H++PR  GD
Sbjct:    4 ESFKFGPYNID-SREVFYSTKLSYALVNLRPLVPGHVLVCPRREVKRFVDLTADETSDLWITAQRVGSRLESYHKASSLTLAIQDGPEAGQTVPHVHIHILPRKGGD 109          
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Match: UPI000C1CD2F0 (bifunctional bis(5'-adenosyl)-triphosphatase/adenylylsulfatase FHIT-like isoform X2 n=1 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1CD2F0)

HSP 1 Score: 86.7 bits (213), Expect = 5.760e-19
Identity = 44/107 (41.12%), Postives = 62/107 (57.94%), Query Frame = 1
Query:    1 KEFGFGPYKVDVAHQIIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGHLTEKEARDLGEMLWRGVVVTRALHKCPAVLLAIQDGALAGQTVPHSHLHVIPRWRGD 321
            + + FGPYK+D+  Q+  S       VNL+PVVPGH L+  RR + R   LT  E  D+     +  +   + HK  ++   IQDG  +GQTVPH H+H++PR RGD
Sbjct:    4 ESYMFGPYKIDLK-QVFYSTQLSYALVNLRPVVPGHVLICPRREIKRFVDLTADETSDIWLTAQKVGLQLESYHKASSLTFTIQDGPQSGQTVPHVHIHILPRKRGD 109          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84906.19789.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1Y2D540_9FUNG9.590e-2147.62HIT-like protein n=1 Tax=Rhizoclosmatium globosum ... [more]
A0A699YXQ0_HAELA1.000e-2046.73HIT domain-containing protein (Fragment) n=1 Tax=H... [more]
A0A7S2GEV3_9STRA3.320e-2047.62Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
D8ULT2_VOLCA1.720e-1946.67Bis(5'-adenosyl)-triphosphatase (Fragment) n=1 Tax... [more]
A0A4T0FH95_9BASI2.310e-1945.00HIT domain-containing protein n=1 Tax=Wallemia hed... [more]
UPI001262E65C2.340e-1944.76bifunctional bis(5'-adenosyl)-triphosphatase/adeny... [more]
UPI0009AB71773.300e-1945.79bifunctional bis(5'-adenosyl)-triphosphatase/adeny... [more]
A0A163CY42_PHYB84.080e-1943.81Bis(5'-adenosyl)-triphosphatase n=1 Tax=Phycomyces... [more]
UPI0010A9F8A45.620e-1944.86bifunctional bis(5'-adenosyl)-triphosphatase/adeny... [more]
UPI000C1CD2F05.760e-1941.12bifunctional bis(5'-adenosyl)-triphosphatase/adeny... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84906contigM-pyrifera_M_contig84906:215..610 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score89.4
Seed ortholog evalue1.4e-15
Seed eggNOG ortholog102107.XP_008218195.1
KEGG rclassRC00002
KEGG koko:K01522
KEGG ReactionR00187
KEGG Pathwayko00230,ko05222,ko05223,map00230,map05222,map05223
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0016787,GO:0016810,GO:0016811,GO:0016817,GO:0016819,GO:0043530,GO:0044424,GO:0044444,GO:0044464,GO:0047627
EggNOG free text desc.Bis(5'-adenosyl)-triphosphatase-like
EggNOG OGs37TXH@33090,3GHYS@35493,4JNTY@91835,COG0537@1,KOG3379@2759
EC3.6.1.29
COG Functional cat.F
Best tax levelfabids
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons1
Model size396
Cds size396
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816756.569387-CDS-M-pyrifera_M_contig84906:214..6101622816756.569387-CDS-M-pyrifera_M_contig84906:214..610Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84906 215..610 -
1692278159.8678024-CDS-M-pyrifera_M_contig84906:214..6101692278159.8678024-CDS-M-pyrifera_M_contig84906:214..610Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84906 215..610 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84906.19789.1prot_M-pyrifera_M_contig84906.19789.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84906 215..610 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84906.19789.1

>prot_M-pyrifera_M_contig84906.19789.1 ID=prot_M-pyrifera_M_contig84906.19789.1|Name=mRNA_M-pyrifera_M_contig84906.19789.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
KEFGFGPYKVDVAHQIIRSGVRVVHFVNLKPVVPGHTLVVVRRRVPRVGH
LTEKEARDLGEMLWRGVVVTRALHKCPAVLLAIQDGALAGQTVPHSHLHV
IPRWRGDVLMPEIPKAEDASSSSSSSSSSSSS
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mRNA from alignment at M-pyrifera_M_contig84906:215..610-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84906.19789.1 ID=mRNA_M-pyrifera_M_contig84906.19789.1|Name=mRNA_M-pyrifera_M_contig84906.19789.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig84906:215..610- (Macrocystis pyrifera P11B4 male)
AAGGAATTTGGGTTTGGTCCTTACAAGGTGGATGTGGCTCATCAGATCAT CCGTAGTGGAGTACGAGTGGTGCATTTTGTCAACTTGAAGCCTGTTGTCC CTGGTCATACTTTGGTGGTGGTTCGGAGGAGAGTGCCACGAGTGGGGCAT TTGACAGAGAAGGAAGCGAGGGATCTAGGGGAAATGCTGTGGAGGGGAGT GGTGGTCACTCGAGCACTCCACAAATGCCCTGCCGTACTCTTAGCCATCC AAGATGGAGCGTTGGCGGGGCAAACCGTACCCCATTCCCACCTCCATGTC ATCCCAAGGTGGAGAGGAGATGTGTTGATGCCGGAAATTCCAAAGGCAGA AGATGCATCGTCGTCGTCTTCTTCATCTTCTTCTTCTTCTTCTTCG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84906:215..610-

>mRNA_M-pyrifera_M_contig84906.19789.1 ID=mRNA_M-pyrifera_M_contig84906.19789.1|Name=mRNA_M-pyrifera_M_contig84906.19789.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig84906:215..610- (Macrocystis pyrifera P11B4 male)
AAGGAATTTGGGTTTGGTCCTTACAAGGTGGATGTGGCTCATCAGATCAT
CCGTAGTGGAGTACGAGTGGTGCATTTTGTCAACTTGAAGCCTGTTGTCC
CTGGTCATACTTTGGTGGTGGTTCGGAGGAGAGTGCCACGAGTGGGGCAT
TTGACAGAGAAGGAAGCGAGGGATCTAGGGGAAATGCTGTGGAGGGGAGT
GGTGGTCACTCGAGCACTCCACAAATGCCCTGCCGTACTCTTAGCCATCC
AAGATGGAGCGTTGGCGGGGCAAACCGTACCCCATTCCCACCTCCATGTC
ATCCCAAGGTGGAGAGGAGATGTGTTGATGCCGGAAATTCCAAAGGCAGA
AGATGCATCGTCGTCGTCTTCTTCATCTTCTTCTTCTTCTTCTTCGAAGG
AATTTGGGTTTGGTCCTTACAAGGTGGATGTGGCTCATCAGATCATCCGT
AGTGGAGTACGAGTGGTGCATTTTGTCAACTTGAAGCCTGTTGTCCCTGG
TCATACTTTGGTGGTGGTTCGGAGGAGAGTGCCACGAGTGGGGCATTTGA
CAGAGAAGGAAGCGAGGGATCTAGGGGAAATGCTGTGGAGGGGAGTGGTG
GTCACTCGAGCACTCCACAAATGCCCTGCCGTACTCTTAGCCATCCAAGA
TGGAGCGTTGGCGGGGCAAACCGTACCCCATTCCCACCTCCATGTCATCC
CAAGGTGGAGAGGAGATGTGTTGATGCCGGAAATTCCAAAGGCAGAAGAT
GCATCGTCGTCGTCTTCTTCATCTTCTTCTTCTTCTTCTTCG
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