mRNA_M-pyrifera_M_contig109421.1978.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig109421.1978.1
Unique NamemRNA_M-pyrifera_M_contig109421.1978.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Match: A0A2E7EME5_9PLAN (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2E7EME5_9PLAN)

HSP 1 Score: 153 bits (387), Expect = 7.960e-41
Identity = 70/132 (53.03%), Postives = 98/132 (74.24%), Query Frame = 1
Query:    1 GESETVRLTPE-DEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRNIRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIRRLRLWCHPFWAGFLVLLLGLFWTGRKLTGVI 393
            G +E++R+T   DEWGL+ G FTP++ G Y+L L  RE+++TL   L V+ + RE++GQPAR DVL EIA +T G+++ + ++  L   +A +PEP+  IRRLR+WCHP WAGFLVLLLG+FWTGRK+ G I
Sbjct:  603 GNTESIRMTANGDEWGLFTGSFTPQEPGTYQLQLNCRENESTLNAQLVVQGMEREQIGQPARYDVLEEIAKVTRGRMVPSEKVEDLFQEIAAIPEPEPVIRRLRIWCHPLWAGFLVLLLGIFWTGRKMVGAI 734          
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Match: A0A495ZER4_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A495ZER4_9BACT)

HSP 1 Score: 144 bits (364), Expect = 1.180e-37
Identity = 67/133 (50.38%), Postives = 99/133 (74.44%), Query Frame = 1
Query:    1 GESETVRLTP--EDEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRNIRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIRRLRLWCHPFWAGFLVLLLGLFWTGRKLTGVI 393
            G ++ +RL P  E+ WGL+ G FTP+++G Y+L  TS E+ A+++T L+V+ + RER G+ AR DVL+EIA IT G+++  S+++ L D+LATLPEP+  + R+R+W HP WA FL+LLLGLFW GRK+ G +
Sbjct:  601 GVTQAIRLQPSKEEAWGLFTGSFTPKESGNYRLVATSVETGASIQTDLSVQGLNRERQGRLARFDVLDEIAKITEGRLVPVSDVQSLLDSLATLPEPEPIVHRIRIWSHPLWAAFLILLLGLFWIGRKMAGTV 733          
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Match: A0A517QLB7_9PLAN (Uncharacterized protein n=1 Tax=Thalassoglobus polymorphus TaxID=2527994 RepID=A0A517QLB7_9PLAN)

HSP 1 Score: 143 bits (361), Expect = 3.140e-37
Identity = 66/132 (50.00%), Postives = 95/132 (71.97%), Query Frame = 1
Query:    1 GESETVRLTP--EDEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRNIRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIRRLRLWCHPFWAGFLVLLLGLFWTGRKLTGV 390
            G+++ + L+P  ED WGL+ G FTP++ G+YKL  +  E+ A LETT++V+ I RER+G+PAR DVL E++TI+ G+++   E+  L + +A LPEP   IRR R+W HP W G L+LLLG+FW GRKL G+
Sbjct:  610 GQTDALTLSPAGEDSWGLFTGTFTPKEGGQYKLVTSCAETGAKLETTISVQGIERERIGEPARLDVLKEVSTISRGRLVSIGEIDSLVEEIADLPEPAPIIRRFRIWSHPAWGGTLILLLGVFWVGRKLAGL 741          
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Match: UPI0019A459D4 (Uncharacterized protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=UPI0019A459D4)

HSP 1 Score: 131 bits (330), Expect = 4.570e-37
Identity = 61/120 (50.83%), Postives = 91/120 (75.83%), Query Frame = 1
Query:   34 DEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRNIRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIRRLRLWCHPFWAGFLVLLLGLFWTGRKLTGVI 393
            DEWG++   FT E+ G++++TL  ++++ATLET+  V+ +  ER+G+PAR +VL EIA +T G+VL+ ++L Q+  +LA LPEP  SIRR++LW HP +AG LV LLG+FW GRK+ G+I
Sbjct:    4 DEWGVFHSRFTAEEPGKHEVTLLCKQTNATLETSFFVQGVAAERVGRPARPEVLEEIARVTRGKVLEPAKLDQIVQSLANLPEPLPSIRRVQLWSHPVYAGLLVFLLGVFWVGRKVIGLI 123          
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Match: A0A3L7S519_9BACT (VWA domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3L7S519_9BACT)

HSP 1 Score: 142 bits (359), Expect = 5.650e-37
Identity = 68/132 (51.52%), Postives = 92/132 (69.70%), Query Frame = 1
Query:    1 GESETVRLTP--EDEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRNIRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIRRLRLWCHPFWAGFLVLLLGLFWTGRKLTGV 390
            G++++VRL P  ED WGL+ G FTP + G+YK   T  E+   LETT+AV    +E +GQPARTDVL EIA +T G++   SE+++L D +A +PEP+   R  RLW HP WA  +V+LLG+FWTGRKL G+
Sbjct:  595 GQTDSVRLAPAGEDSWGLFTGTFTPTEGGQYKFVTTCAENGGRLETTIAVLGQEKELIGQPARTDVLKEIAQVTRGELTTVSEIQKLVDRIAAMPEPEPLNRPFRLWSHPAWAAMIVVLLGVFWTGRKLAGL 726          
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Match: A0A7Z9R0K9_9BACT (Uncharacterized protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A7Z9R0K9_9BACT)

HSP 1 Score: 135 bits (340), Expect = 6.120e-37
Identity = 64/133 (48.12%), Postives = 98/133 (73.68%), Query Frame = 1
Query:    1 GESETVRLT--PEDEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRNIRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIRRLRLWCHPFWAGFLVLLLGLFWTGRKLTGVI 393
            G+++T+RL    ED WGL+ G F P++AG Y+L  +  E+ A+++  L+V+ + RER G+ AR DVL+EIATIT G+++  SE++ L D LATLPEP+++I R+RLW HP  +G L++L+G+FW GRK+ G +
Sbjct:  125 GKTQTIRLQLGEEDAWGLFVGSFVPKEAGNYRLIASCVETGASVQADLSVQGLNRERKGRVARFDVLDEIATITKGKLVPVSEVQSLLDHLATLPEPESTIHRIRLWSHPILSGILIVLMGVFWVGRKMIGAV 257          
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Match: A0A2E4DUW8_9BACT (Uncharacterized protein n=4 Tax=root TaxID=1 RepID=A0A2E4DUW8_9BACT)

HSP 1 Score: 142 bits (358), Expect = 7.900e-37
Identity = 66/133 (49.62%), Postives = 98/133 (73.68%), Query Frame = 1
Query:    1 GESETVRLTP--EDEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRNIRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIRRLRLWCHPFWAGFLVLLLGLFWTGRKLTGVI 393
            G+++T+RL P  ED WGL+ G F P++AG Y+L  +  E+ A+++  L+V+ + RER G+ AR DVL+EIA IT G+++  SE++ L D LATLPEP+++I R+RLW HP W G L++LLG+FW GRK+ G +
Sbjct:  601 GKTQTIRLQPGEEDTWGLFVGSFEPKEAGNYRLITSCAETGASVQADLSVQGLNRERKGRVARFDVLDEIAEITKGKLVPVSEVQNLLDHLATLPEPESTIHRIRLWAHPIWGGILIVLLGIFWIGRKMIGAV 733          
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Match: A0A5C5X4Q8_9PLAN (Uncharacterized protein n=1 Tax=Thalassoglobus neptunius TaxID=1938619 RepID=A0A5C5X4Q8_9PLAN)

HSP 1 Score: 141 bits (356), Expect = 1.540e-36
Identity = 69/132 (52.27%), Postives = 91/132 (68.94%), Query Frame = 1
Query:    1 GESETVRL--TPEDEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRNIRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIRRLRLWCHPFWAGFLVLLLGLFWTGRKLTGV 390
            G+ ET+RL  T E+ WGL+ G FTPE+ G Y +  T  E+   LETT+AV    RE +G PAR DVL+EIATI+ G+V   S++ QL D LA L EP+  +RRLR+W HP W G ++LLL +FW+GRKL G+
Sbjct:  615 GQVETLRLQTTDEESWGLFTGMFTPEEGGNYTVLTTCTETGTQLETTIAVAGGEREVIGDPARFDVLHEIATISRGEVTDPSQMNQLVDKLAKLEEPEPVVRRLRVWAHPLWGGLMILLLAVFWSGRKLAGL 746          
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Match: A0A496ANU5_9BACT (VWFA domain-containing protein n=1 Tax=Candidatus Poribacteria bacterium TaxID=2026781 RepID=A0A496ANU5_9BACT)

HSP 1 Score: 141 bits (355), Expect = 2.050e-36
Identity = 68/133 (51.13%), Postives = 95/133 (71.43%), Query Frame = 1
Query:    1 GESETVRLTP--EDEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRNIRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIRRLRLWCHPFWAGFLVLLLGLFWTGRKLTGVI 393
            G++ET+RL P  +D WGL+ G F+P++AG YKL  +S E+ A++ET L+V+ + RE+ G+ AR DVL EIA IT G+++  SE+  L D LA LPEPQ  ++R R+W HP W G L+LLLG+FW  RK+ G I
Sbjct:  603 GKTETIRLQPGIDDAWGLFVGTFSPKEAGNYKLIASSSETGASVETDLSVQGLNREQQGKLARFDVLEEIANITDGKMVTISEVSNLLDHLAALPEPQPIVQRTRIWAHPLWGGLLILLLGVFWVARKMIGAI 735          
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Match: A0A7C7SUB1_9PLAN (VWA domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7C7SUB1_9PLAN)

HSP 1 Score: 140 bits (354), Expect = 2.790e-36
Identity = 66/133 (49.62%), Postives = 90/133 (67.67%), Query Frame = 1
Query:    1 GESETVRLTPE--DEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRNIRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIRRLRLWCHPFWAGFLVLLLGLFWTGRKLTGVI 393
            G+  ++RL P   D WGL+ G F PE+ GEY+L +T  ++   LET+L V+ + RE+LG PAR +VL EIA +T G++L  S +  L   +A LPEP   +RRLR+W HP WAG L+ LLGLFWTGRK+ G +
Sbjct:  601 GKVSSIRLAPGSGDSWGLFHGDFKPEEPGEYQLMVTCADNGGFLETSLNVQGVSREKLGHPARLEVLEEIAKVTQGEILDWSSISDLLPKIAALPEPDPQVRRLRIWAHPLWAGILIALLGLFWTGRKIMGTV 733          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109421.1978.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7EME5_9PLAN7.960e-4153.03Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A495ZER4_9BACT1.180e-3750.38Uncharacterized protein n=1 Tax=Candidatus Poribac... [more]
A0A517QLB7_9PLAN3.140e-3750.00Uncharacterized protein n=1 Tax=Thalassoglobus pol... [more]
UPI0019A459D44.570e-3750.83Uncharacterized protein n=1 Tax=Planctomycetaceae ... [more]
A0A3L7S519_9BACT5.650e-3751.52VWA domain-containing protein n=1 Tax=Planctomycet... [more]
A0A7Z9R0K9_9BACT6.120e-3748.12Uncharacterized protein n=1 Tax=Candidatus Poribac... [more]
A0A2E4DUW8_9BACT7.900e-3749.62Uncharacterized protein n=4 Tax=root TaxID=1 RepID... [more]
A0A5C5X4Q8_9PLAN1.540e-3652.27Uncharacterized protein n=1 Tax=Thalassoglobus nep... [more]
A0A496ANU5_9BACT2.050e-3651.13VWFA domain-containing protein n=1 Tax=Candidatus ... [more]
A0A7C7SUB1_9PLAN2.790e-3649.62VWA domain-containing protein n=1 Tax=Planctomycet... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109421contigM-pyrifera_M_contig109421:2..397 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score133.7
Seed ortholog evalue6.5e-29
Seed eggNOG ortholog497964.CfE428DRAFT_6563
Hectar predicted targeting categoryother localisation
EggNOG free text desc.von Willebrand factor, type A
EggNOG OGs46UHZ@74201,COG2304@1,COG2304@2,COG5426@1,COG5426@2
COG Functional cat.S
Best tax levelVerrucomicrobia
Best eggNOG OGNA|NA|NA
Exons1
Model size396
Cds size396
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622815604.9405959-CDS-M-pyrifera_M_contig109421:1..3971622815604.9405959-CDS-M-pyrifera_M_contig109421:1..397Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109421 2..397 +
1692277483.8681595-CDS-M-pyrifera_M_contig109421:1..3971692277483.8681595-CDS-M-pyrifera_M_contig109421:1..397Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig109421 2..397 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109421.1978.1prot_M-pyrifera_M_contig109421.1978.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig109421 2..397 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig109421.1978.1

>prot_M-pyrifera_M_contig109421.1978.1 ID=prot_M-pyrifera_M_contig109421.1978.1|Name=mRNA_M-pyrifera_M_contig109421.1978.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
GESETVRLTPEDEWGLYQGFFTPEDAGEYKLTLTSRESDATLETTLAVRN
IRRERLGQPARTDVLNEIATITGGQVLQASELRQLPDTLATLPEPQASIR
RLRLWCHPFWAGFLVLLLGLFWTGRKLTGVI*
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mRNA from alignment at M-pyrifera_M_contig109421:2..397+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig109421.1978.1 ID=mRNA_M-pyrifera_M_contig109421.1978.1|Name=mRNA_M-pyrifera_M_contig109421.1978.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=396bp|location=Sequence derived from alignment at M-pyrifera_M_contig109421:2..397+ (Macrocystis pyrifera P11B4 male)
GGTGAGTCAGAGACGGTACGGCTCACCCCCGAGGACGAATGGGGACTGTA TCAGGGGTTCTTCACGCCGGAAGATGCGGGGGAGTACAAGCTGACGCTCA CATCAAGGGAGAGCGATGCGACACTGGAGACGACGCTCGCCGTCCGTAAC ATTCGTCGCGAACGACTCGGTCAGCCGGCACGCACAGATGTACTCAATGA GATCGCGACCATCACTGGTGGGCAGGTGTTGCAGGCGAGCGAACTGCGTC AATTGCCCGACACACTGGCCACATTACCGGAACCACAGGCGTCGATCAGG CGTCTCAGGCTATGGTGTCACCCGTTTTGGGCCGGATTTCTGGTCCTTCT GCTCGGACTGTTCTGGACGGGACGCAAGCTGACAGGTGTAATATAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig109421:2..397+

>mRNA_M-pyrifera_M_contig109421.1978.1 ID=mRNA_M-pyrifera_M_contig109421.1978.1|Name=mRNA_M-pyrifera_M_contig109421.1978.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=792bp|location=Sequence derived from alignment at M-pyrifera_M_contig109421:2..397+ (Macrocystis pyrifera P11B4 male)
GGTGAGTCAGAGACGGTACGGCTCACCCCCGAGGACGAATGGGGACTGTA
TCAGGGGTTCTTCACGCCGGAAGATGCGGGGGAGTACAAGCTGACGCTCA
CATCAAGGGAGAGCGATGCGACACTGGAGACGACGCTCGCCGTCCGTAAC
ATTCGTCGCGAACGACTCGGTCAGCCGGCACGCACAGATGTACTCAATGA
GATCGCGACCATCACTGGTGGGCAGGTGTTGCAGGCGAGCGAACTGCGTC
AATTGCCCGACACACTGGCCACATTACCGGAACCACAGGCGTCGATCAGG
CGTCTCAGGCTATGGTGTCACCCGTTTTGGGCCGGATTTCTGGTCCTTCT
GCTCGGACTGTTCTGGACGGGACGCAAGCTGACAGGTGTAATATAGGGTG
AGTCAGAGACGGTACGGCTCACCCCCGAGGACGAATGGGGACTGTATCAG
GGGTTCTTCACGCCGGAAGATGCGGGGGAGTACAAGCTGACGCTCACATC
AAGGGAGAGCGATGCGACACTGGAGACGACGCTCGCCGTCCGTAACATTC
GTCGCGAACGACTCGGTCAGCCGGCACGCACAGATGTACTCAATGAGATC
GCGACCATCACTGGTGGGCAGGTGTTGCAGGCGAGCGAACTGCGTCAATT
GCCCGACACACTGGCCACATTACCGGAACCACAGGCGTCGATCAGGCGTC
TCAGGCTATGGTGTCACCCGTTTTGGGCCGGATTTCTGGTCCTTCTGCTC
GGACTGTTCTGGACGGGACGCAAGCTGACAGGTGTAATATAG
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