prot_M-pyrifera_M_contig84883.19779.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig84883.19779.1
Unique Name	prot_M-pyrifera_M_contig84883.19779.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	148

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: A0A897FYT8_9ROSA (ATP synthase subunit a, chloroplastic n=1 Tax=Rubus kawakamii TaxID=2814610 RepID=A0A897FYT8_9ROSA)

HSP 1 Score: 298 bits (764), Expect = 4.500e-101
Identity = 147/148 (99.32%), Postives = 148/148 (100.00%), Query Frame = 0

Query:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
            MNVLLCSIKTL+GLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY
Sbjct:    1 MNVLLCSIKTLKGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148

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BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: X2EY56_LAGSI (ATP synthase subunit a, chloroplastic n=2 Tax=Lagenaria siceraria TaxID=3668 RepID=X2EY56_LAGSI)

HSP 1 Score: 290 bits (742), Expect = 1.010e-97
Identity = 142/148 (95.95%), Postives = 144/148 (97.30%), Query Frame = 0

Query:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
            MN+LLCSI T +GLYDISGVEVGQH YWQIG FQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY
Sbjct:    1 MNILLCSINTQKGLYDISGVEVGQHLYWQIGGFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148

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BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: A0A2I8B6C7_9LAMI (ATP synthase CF0 A subunit n=2 Tax=lamiids TaxID=91888 RepID=A0A2I8B6C7_9LAMI)

HSP 1 Score: 285 bits (730), Expect = 7.610e-97
Identity = 140/148 (94.59%), Postives = 142/148 (95.95%), Query Frame = 0

Query:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
            MNVL CSI TL+GLYDISGVEVGQHFYWQIG FQVH QVLITSWVVIAILLGSA IAVRNPQTIPT GQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTSVAY
Sbjct:    1 MNVLSCSINTLKGLYDISGVEVGQHFYWQIGGFQVHGQVLITSWVVIAILLGSATIAVRNPQTIPTGGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSVAY 148

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: ATPI_ORYSI (ATP synthase subunit a, chloroplastic n=169 Tax=Mesangiospermae TaxID=1437183 RepID=ATPI_ORYSI)

HSP 1 Score: 287 bits (734), Expect = 1.660e-96
Identity = 138/148 (93.24%), Postives = 143/148 (96.62%), Query Frame = 0

Query:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
            MN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS IIAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTS AY
Sbjct:    1 MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVIIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSAAY 148

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: ATPI_ORYNI (ATP synthase subunit a, chloroplastic n=2 Tax=BOP clade TaxID=359160 RepID=ATPI_ORYNI)

HSP 1 Score: 287 bits (734), Expect = 1.660e-96
Identity = 138/148 (93.24%), Postives = 143/148 (96.62%), Query Frame = 0

Query:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
            MN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS IIAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTS AY
Sbjct:    1 MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVIIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSAAY 148

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BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: UPI001D003F41 (ATP synthase subunit a, chloroplastic-like n=1 Tax=Triticum aestivum TaxID=4565 RepID=UPI001D003F41)

HSP 1 Score: 285 bits (730), Expect = 3.930e-96
Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 0

Query:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
            MN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS +IAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS AY
Sbjct:   40 MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVVIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSAAY 187

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: A0A6J5TVQ6_PRUAR (DNA-directed RNA polymerase n=1 Tax=Prunus armeniaca TaxID=36596 RepID=A0A6J5TVQ6_PRUAR)

HSP 1 Score: 300 bits (768), Expect = 4.100e-96
Identity = 148/148 (100.00%), Postives = 148/148 (100.00%), Query Frame = 0

Query:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
            MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY
Sbjct:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: A0A218LUN2_TAECM (ATP synthase subunit a, chloroplastic (Fragment) n=2 Tax=Triticeae TaxID=147389 RepID=A0A218LUN2_TAECM)

HSP 1 Score: 285 bits (730), Expect = 5.700e-96
Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 0

Query:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
            MN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS +IAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS AY
Sbjct:    1 MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVVIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSAAY 148

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: ATPI_WHEAT (ATP synthase subunit a, chloroplastic n=122 Tax=Magnoliopsida TaxID=3398 RepID=ATPI_WHEAT)

HSP 1 Score: 285 bits (730), Expect = 6.750e-96
Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 0

Query:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
            MN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS +IAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS AY
Sbjct:    1 MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVVIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSAAY 148

[Close]

BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Match: ATPI_AGRST (ATP synthase subunit a, chloroplastic n=227 Tax=Poaceae TaxID=4479 RepID=ATPI_AGRST)

HSP 1 Score: 285 bits (730), Expect = 6.750e-96
Identity = 136/148 (91.89%), Postives = 143/148 (96.62%), Query Frame = 0

Query:    1 MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAILLGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY 148
            MN++ CSIKTL+GLYDISGVEVGQHFYWQIG FQ+HAQVLITSWVVI ILLGS +IAVRNPQTIPTDGQNFFEYVLEFIRD+SKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKII+LPHGELAAPTNDINTTVALALLTS AY
Sbjct:    1 MNIIPCSIKTLKGLYDISGVEVGQHFYWQIGGFQIHAQVLITSWVVITILLGSVVIAVRNPQTIPTDGQNFFEYVLEFIRDLSKTQIGEEYGPWVPFIGTMFLFIFVSNWSGALLPWKIIELPHGELAAPTNDINTTVALALLTSAAY 148

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig84883.19779.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A897FYT8_9ROSA	4.500e-101	99.32	ATP synthase subunit a, chloroplastic n=1 Tax=Rubu...	[more]
X2EY56_LAGSI	1.010e-97	95.95	ATP synthase subunit a, chloroplastic n=2 Tax=Lage...	[more]
A0A2I8B6C7_9LAMI	7.610e-97	94.59	ATP synthase CF0 A subunit n=2 Tax=lamiids TaxID=9...	[more]
ATPI_ORYSI	1.660e-96	93.24	ATP synthase subunit a, chloroplastic n=169 Tax=Me...	[more]
ATPI_ORYNI	1.660e-96	93.24	ATP synthase subunit a, chloroplastic n=2 Tax=BOP ...	[more]
UPI001D003F41	3.930e-96	91.89	ATP synthase subunit a, chloroplastic-like n=1 Tax...	[more]
A0A6J5TVQ6_PRUAR	4.100e-96	100.00	DNA-directed RNA polymerase n=1 Tax=Prunus armenia...	[more]
A0A218LUN2_TAECM	5.700e-96	91.89	ATP synthase subunit a, chloroplastic (Fragment) n...	[more]
ATPI_WHEAT	6.750e-96	91.89	ATP synthase subunit a, chloroplastic n=122 Tax=Ma...	[more]
ATPI_AGRST	6.750e-96	91.89	ATP synthase subunit a, chloroplastic n=227 Tax=Po...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000568	ATP synthase, F0 complex, subunit A	PFAM	PF00119	ATP-synt_A	coord: 41..147 e-value: 5.4E-22 score: 78.8
IPR035908	ATP synthase, F0 complex, subunit A superfamily	GENE3D	1.20.120.220		coord: 91..148 e-value: 6.6E-8 score: 34.9
IPR035908	ATP synthase, F0 complex, subunit A superfamily	SUPERFAMILY	81336	F1F0 ATP synthase subunit A	coord: 89..147
None	No IPR available	PANTHER	PTHR42823	FAMILY NOT NAMED	coord: 8..148
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 94..115
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 116..148
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 59..93
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 39..58
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..38
None	No IPR available	TMHMM	TMhelix		coord: 39..58
None	No IPR available	TMHMM	TMhelix		coord: 93..115

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig84883	contig	M-pyrifera_M_contig84883:427..870 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig84883.19779.1	mRNA_M-pyrifera_M_contig84883.19779.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig84883 312..870 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig84883.19779.1 ID=prot_M-pyrifera_M_contig84883.19779.1|Name=mRNA_M-pyrifera_M_contig84883.19779.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp
MNVLLCSIKTLEGLYDISGVEVGQHFYWQIGSFQVHAQVLITSWVVIAIL
LGSAIIAVRNPQTIPTDGQNFFEYVLEFIRDVSKTQIGEEYGPWVPFIGT
MFLFIFVSNWSGALLPWKIIQLPHGELAAPTNDINTTVALALLTSVAY

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR000568	ATP_synth_F0_asu
IPR035908	F0_ATP_A_sf