mRNA_M-pyrifera_M_contig84788.19755.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig84788.19755.1
Unique NamemRNA_M-pyrifera_M_contig84788.19755.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: A0A5A8EMJ2_CAFRO (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Sar TaxID=2698737 RepID=A0A5A8EMJ2_CAFRO)

HSP 1 Score: 353 bits (906), Expect = 8.740e-121
Identity = 184/237 (77.64%), Postives = 207/237 (87.34%), Query Frame = 1
Query:   31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTA-LPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738
            RKKEAR AH  S  +K+L G+RAKL +K+R KEKV MKKT A HEEK  + +  VA   TA +P YLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKP+AD E+F I  +GK++ KAWKR++TKVT+VGEGF RKPPKYERF+RPMALR KKAHVTHPELQATFCLDI+GVKKNPSS++YTQLGVITKGT+IEVNV+DLGLVTP GKVVWGKYAQVTNNPE+D CINAVLLV
Sbjct:   25 RKKEAREAHRNSEMSKKLQGIRAKLFHKQRFKEKVAMKKTIAAHEEK--DSRARVAPDSTAAMPHYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPIADDEMFNIIKTGKKQNKAWKRMITKVTFVGEGFTRKPPKYERFIRPMALRHKKAHVTHPELQATFCLDIIGVKKNPSSTMYTQLGVITKGTVIEVNVSDLGLVTPAGKVVWGKYAQVTNNPEMDNCINAVLLV 259          
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: F0Y825_AURAN (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Pelagomonadales TaxID=54409 RepID=F0Y825_AURAN)

HSP 1 Score: 347 bits (891), Expect = 1.730e-118
Identity = 175/236 (74.15%), Postives = 203/236 (86.02%), Query Frame = 1
Query:   31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738
            RKKEAR  HE ++ AK++HGLRAKL NK+R KEK  M+KT AMHEEK+   +     +D A+P++LLDREG SRAK+LSN++KQKR EKAGKWSVPIPKVKPVAD E+FR++ SGKRKKK+WKRVVTKVT+V   F RKPPKYERF+RP  L  KKAHVTHPEL+ATFCLDI+GVKKNPSS +YT LGVITKGT+IEVNV++LGLVT TG+VVWGKYAQVTNNPELDGCINAVLLV
Sbjct:   25 RKKEARSVHENAKFAKKVHGLRAKLYNKQRFKEKATMRKTIAMHEEKEARARNDDGANDGAVPAFLLDREGASRAKILSNSIKQKRAEKAGKWSVPIPKVKPVADDEMFRVQQSGKRKKKSWKRVVTKVTFVDPNFTRKPPKYERFIRPSGLSMKKAHVTHPELKATFCLDIIGVKKNPSSQMYTTLGVITKGTVIEVNVSELGLVTTTGRVVWGKYAQVTNNPELDGCINAVLLV 260          
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: A0A7S3ZIB4_9EUKA (Ribosome biogenesis protein NSA2 homolog n=3 Tax=Chlorarachniophyceae TaxID=29197 RepID=A0A7S3ZIB4_9EUKA)

HSP 1 Score: 347 bits (889), Expect = 4.450e-118
Identity = 175/236 (74.15%), Postives = 205/236 (86.86%), Query Frame = 1
Query:   31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738
            RK+EAR AH  S+ AK+ HGL+AK+LNK+R+KEK  MKKT AMHE+   + K   A    A+P++L+DREGVSRAKVLSNTVKQKRKEKAGKW+VP+PKV+P+A++E+FR+  +G RKKKAWKR++TKVTYVGEGF RKPPKYERF+RP  LRFKKAHVTHPEL+ TF LDI+GVKKNP S LYT LGVITKGT+IEVNV+DLGLVTP+GKVVWGKYAQVTNNPE DGCINAVLLV
Sbjct:   32 RKREAREAHTRSKIAKKAHGLKAKMLNKQRYKEKATMKKTIAMHEQSTNKHKEKDAEPSGAVPAFLMDREGVSRAKVLSNTVKQKRKEKAGKWAVPVPKVRPMAEAEMFRVMRTGVRKKKAWKRMITKVTYVGEGFTRKPPKYERFIRPTGLRFKKAHVTHPELKCTFHLDIIGVKKNPQSPLYTNLGVITKGTVIEVNVSDLGLVTPSGKVVWGKYAQVTNNPENDGCINAVLLV 267          
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: A0A7S3JUX5_9STRA (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JUX5_9STRA)

HSP 1 Score: 346 bits (888), Expect = 4.960e-118
Identity = 178/236 (75.42%), Postives = 202/236 (85.59%), Query Frame = 1
Query:   31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738
            RKKEAR  HE +R A+++HGLRAKL NKKR KEK  M+KT AMHEEK G  +     S+ A+P+YLLDREGVSRAK+LSNTVKQKR +KAGKWSVPIPKV+PVAD E+FR++ SGKR KK+WKRVV KVT+V + F RKPPKYERF+RP  LR KKAHVTHPEL+ TF LDILGVKKNPSS +YT LGVITKGTIIEVNV+DLGLVT +G+VVWGKYAQVTNNPELDGCINAVLLV
Sbjct:   25 RKKEARAVHEEARFARKIHGLRAKLHNKKRFKEKATMRKTIAMHEEKDGRGRNDDGASEGAVPAYLLDREGVSRAKLLSNTVKQKRADKAGKWSVPIPKVRPVADDEMFRVQTSGKRNKKSWKRVVNKVTFVDDNFTRKPPKYERFIRPTGLRMKKAHVTHPELKTTFNLDILGVKKNPSSPMYTALGVITKGTIIEVNVSDLGLVTTSGRVVWGKYAQVTNNPELDGCINAVLLV 260          
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: W7THK2_9STRA (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7THK2_9STRA)

HSP 1 Score: 346 bits (887), Expect = 7.030e-118
Identity = 174/236 (73.73%), Postives = 204/236 (86.44%), Query Frame = 1
Query:   31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738
            RKKEAR  H  S+ A+++HGLRAKL N KR+KEK QM+KT AMH+EK  ++       + A+P+YL+DREG+SRAKVLSN+VKQKR EKAGKWSVP+PKVKPVAD E+F++  SGKRK K+WKR+VTKVT+VGE F RK PK+ERF+RP  LRFKKAHVTHP+LQATFCLDILGVKKNPSS +YT LGVITKGT+IEVNV++LGLVT +GKVVWGKYAQVTNNPELDGCINAVLLV
Sbjct:   25 RKKEAREVHRRSKFAQKVHGLRAKLYNAKRYKEKAQMRKTLAMHQEKTNKRANQEGAPEGAVPAYLIDREGISRAKVLSNSVKQKRAEKAGKWSVPLPKVKPVADDEMFKVMQSGKRKAKSWKRMVTKVTFVGENFTRKAPKFERFIRPTGLRFKKAHVTHPDLQATFCLDILGVKKNPSSPMYTTLGVITKGTVIEVNVSELGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 260          
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: D7FR97_ECTSI (Ribosome biogenesis protein NSA2 homolog n=3 Tax=PX clade TaxID=569578 RepID=D7FR97_ECTSI)

HSP 1 Score: 344 bits (883), Expect = 2.860e-117
Identity = 178/236 (75.42%), Postives = 203/236 (86.02%), Query Frame = 1
Query:   31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738
            RKK+AR  H+ S  A+++HG+RAKL  +KR KEK  M+KT AMH+E+  +     A  D A+P+YLLDREGVSRAKVLSNTVKQKRKEKAGKW VPIPKVKPVAD E+F++  SGKRK KAWKR+VTKVT+VGEGF RK PKYERF+RP  LRFKKAHVTHPEL+ATF LDILGVKKNPSS LYTQLGV+TKGT+IEVNV+DLGLVT +GKVVWGKYAQVTN+PELDGCINAVLLV
Sbjct:   25 RKKDAREVHKRSEFAQKVHGIRAKLYQRKRFKEKATMRKTIAMHQERTNKHANDDAVPDGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPVADDEMFKVLRSGKRKNKAWKRMVTKVTFVGEGFTRKAPKYERFIRPTGLRFKKAHVTHPELKATFHLDILGVKKNPSSPLYTQLGVMTKGTVIEVNVSDLGLVTQSGKVVWGKYAQVTNSPELDGCINAVLLV 260          
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: A0A7S2DND8_9STRA (Ribosome biogenesis protein NSA2 homolog n=2 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DND8_9STRA)

HSP 1 Score: 344 bits (882), Expect = 5.730e-117
Identity = 179/237 (75.53%), Postives = 204/237 (86.08%), Query Frame = 1
Query:   28 SRKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738
            +RK++AR  H+ S+ A+ +HGLRAKL N+KR KEK  M+KT AMH+E+  +     A    ALP+YLLDREGVSRAKVLSNTVKQKRKEKAGKW+VPIPKVKPVAD E+F++  SGKRK KAWKR+VTKVT+VG  F RK PKYERF+RP  LRFKKAHVTHPELQATF LD+LGVKKNPSS+LYTQLGVITKGT+IEVNV+DLGLVT +GKVVWGKYAQVTNNPELDGCINAVLLV
Sbjct:   34 ARKRQAREVHKKSKFAQCVHGLRAKLYNQKRFKEKAVMRKTIAMHQERDNKHGNDDALPKDALPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWNVPIPKVKPVADEEMFKVMRSGKRKAKAWKRMVTKVTFVGPNFTRKNPKYERFIRPSGLRFKKAHVTHPELQATFHLDLLGVKKNPSSNLYTQLGVITKGTVIEVNVSDLGLVTTSGKVVWGKYAQVTNNPELDGCINAVLLV 270          
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: C3Y211_BRAFL (Ribosome biogenesis protein NSA2 homolog n=5 Tax=Bilateria TaxID=33213 RepID=C3Y211_BRAFL)

HSP 1 Score: 343 bits (881), Expect = 5.750e-117
Identity = 175/236 (74.15%), Postives = 203/236 (86.02%), Query Frame = 1
Query:   31 RKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738
            RKKEARR HE++  AK+L GL+AKL NKKRH EKVQMKKT  MHEE+K +++        A+P+YLLDREG SRAKVLSN +KQKRKEKAGKW VP+PKV+  +++E+FR+  +GK KKKAWKR+VTKVTYVGEGF RKPPKYERF+RPM LRFKKAHVTHPEL+ATFCL I+GVKKNP+S LYT LGVITKGT+IEVNV++LGLVT  GKV+WGKYAQVTNNPE DGCINAVLLV
Sbjct:   25 RKKEARRPHEMAEKAKKLKGLKAKLYNKKRHAEKVQMKKTLKMHEERKTKERKDDKVPQGAVPAYLLDREGQSRAKVLSNMIKQKRKEKAGKWEVPLPKVRAQSEAEVFRVVKTGKSKKKAWKRMVTKVTYVGEGFTRKPPKYERFIRPMGLRFKKAHVTHPELKATFCLPIIGVKKNPTSPLYTSLGVITKGTVIEVNVSELGLVTQGGKVIWGKYAQVTNNPENDGCINAVLLV 260          
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: W4GLP2_9STRA (Ribosome biogenesis protein NSA2 homolog n=6 Tax=Oomycota TaxID=4762 RepID=W4GLP2_9STRA)

HSP 1 Score: 342 bits (877), Expect = 2.340e-116
Identity = 177/237 (74.68%), Postives = 200/237 (84.39%), Query Frame = 1
Query:   28 SRKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738
            +RKKEAR  H  S  A+++HGLRAKL N+KR KEK  MKKT AMH E+  +        D A+PSYLLDREGVSRAKVLSNTVKQKRKEKAGKW VPIPKVKP+AD E+F++  SGKR+ KAWKR++TK T+VGE F RKPPKYERF+RP A+RFKKAHVTHPEL+ TF LDILGVKKNPSS LYTQLGV+TKGTIIEVNV++LGLVT TGKVVWGK+AQVTNNPE DGCINAVLLV
Sbjct:   24 ARKKEAREVHRRSAFAQKVHGLRAKLYNQKRFKEKAAMKKTLAMHNERTNKHANDDNIPDGAVPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWDVPIPKVKPIADDEMFKVLRSGKRRNKAWKRMITKATFVGENFTRKPPKYERFIRPAAMRFKKAHVTHPELKTTFQLDILGVKKNPSSPLYTQLGVMTKGTIIEVNVSELGLVTTTGKVVWGKFAQVTNNPENDGCINAVLLV 260          
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Match: A0A7S2SRB9_9STRA (Ribosome biogenesis protein NSA2 homolog n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SRB9_9STRA)

HSP 1 Score: 342 bits (876), Expect = 3.320e-116
Identity = 177/237 (74.68%), Postives = 204/237 (86.08%), Query Frame = 1
Query:   28 SRKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKTRAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKAGKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKPPKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVITKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV 738
            SRK++AR AH+ S  A+++HG+RAKL ++KR KEK  M+KT +MH+E+  +     A    A+P+YLLDREGVSRAKVLSNTVKQKRKEKAGKW VPIPKVKPVAD E+F++  SGKRK KAWKR+VTKV +VGE F RK PKYERF+RP  LRFKKAHVTHPELQATF LDI+GVKKNPSSSLYTQLGVITKGT+IEVNV++LGLVT +GKVVWGKYAQVTNNPELDGCINAVLLV
Sbjct:   24 SRKRQAREAHKRSEFAQKVHGIRAKLYHQKRFKEKATMRKTISMHQERDNKHANDEAVPKGAVPAYLLDREGVSRAKVLSNTVKQKRKEKAGKWEVPIPKVKPVADDEMFKVLRSGKRKAKAWKRMVTKVCFVGENFTRKNPKYERFIRPTGLRFKKAHVTHPELQATFHLDIIGVKKNPSSSLYTQLGVITKGTVIEVNVSELGLVTQSGKVVWGKYAQVTNNPELDGCINAVLLV 260          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84788.19755.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8EMJ2_CAFRO8.740e-12177.64Ribosome biogenesis protein NSA2 homolog n=2 Tax=S... [more]
F0Y825_AURAN1.730e-11874.15Ribosome biogenesis protein NSA2 homolog n=2 Tax=P... [more]
A0A7S3ZIB4_9EUKA4.450e-11874.15Ribosome biogenesis protein NSA2 homolog n=3 Tax=C... [more]
A0A7S3JUX5_9STRA4.960e-11875.42Ribosome biogenesis protein NSA2 homolog n=1 Tax=A... [more]
W7THK2_9STRA7.030e-11873.73Ribosome biogenesis protein NSA2 homolog n=2 Tax=M... [more]
D7FR97_ECTSI2.860e-11775.42Ribosome biogenesis protein NSA2 homolog n=3 Tax=P... [more]
A0A7S2DND8_9STRA5.730e-11775.53Ribosome biogenesis protein NSA2 homolog n=2 Tax=D... [more]
C3Y211_BRAFL5.750e-11774.15Ribosome biogenesis protein NSA2 homolog n=5 Tax=B... [more]
W4GLP2_9STRA2.340e-11674.68Ribosome biogenesis protein NSA2 homolog n=6 Tax=O... [more]
A0A7S2SRB9_9STRA3.320e-11674.68Ribosome biogenesis protein NSA2 homolog n=1 Tax=R... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84788contigM-pyrifera_M_contig84788:62..802 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score349.7
Seed ortholog evalue1.1e-93
Seed eggNOG ortholog44056.XP_009036538.1
KEGG koko:K14842
Hectar predicted targeting categoryother localisation
GOsGO:0000460,GO:0000470,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005730,GO:0006139,GO:0006364,GO:0006396,GO:0006725,GO:0006807,GO:0008150,GO:0008152,GO:0009987,GO:0010467,GO:0016070,GO:0016072,GO:0022613,GO:0030684,GO:0030687,GO:0031974,GO:0031981,GO:0032991,GO:0034470,GO:0034641,GO:0034660,GO:0042254,GO:0042273,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0044085,GO:0044237,GO:0044238,GO:0044422,GO:0044424,GO:0044428,GO:0044446,GO:0044464,GO:0046483,GO:0070013,GO:0071704,GO:0071840,GO:0090304,GO:1901360,GO:1990904
EggNOG free text desc.maturation of LSU-rRNA
EggNOG OGsCOG2007@1,KOG3163@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03009
Exons1
Model size741
Cds size741
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816754.7752814-CDS-M-pyrifera_M_contig84788:61..8021622816754.7752814-CDS-M-pyrifera_M_contig84788:61..802Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84788 62..802 -
1692278158.7875078-CDS-M-pyrifera_M_contig84788:61..8021692278158.7875078-CDS-M-pyrifera_M_contig84788:61..802Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig84788 62..802 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84788.19755.1prot_M-pyrifera_M_contig84788.19755.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig84788 62..802 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig84788.19755.1

>prot_M-pyrifera_M_contig84788.19755.1 ID=prot_M-pyrifera_M_contig84788.19755.1|Name=mRNA_M-pyrifera_M_contig84788.19755.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=247bp
MWFWVCFCFSRKKEARRAHEVSRDAKRLHGLRAKLLNKKRHKEKVQMKKT
RAMHEEKKGEKKGGVARSDTALPSYLLDREGVSRAKVLSNTVKQKRKEKA
GKWSVPIPKVKPVADSELFRIEASGKRKKKAWKRVVTKVTYVGEGFVRKP
PKYERFVRPMALRFKKAHVTHPELQATFCLDILGVKKNPSSSLYTQLGVI
TKGTIIEVNVTDLGLVTPTGKVVWGKYAQVTNNPELDGCINAVLLV*
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mRNA from alignment at M-pyrifera_M_contig84788:62..802-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig84788.19755.1 ID=mRNA_M-pyrifera_M_contig84788.19755.1|Name=mRNA_M-pyrifera_M_contig84788.19755.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=741bp|location=Sequence derived from alignment at M-pyrifera_M_contig84788:62..802- (Macrocystis pyrifera P11B4 male)
ATGTGGTTTTGGGTTTGTTTTTGTTTCAGTCGAAAGAAGGAAGCGCGTAG GGCACATGAGGTGAGTCGAGATGCGAAGAGGCTGCATGGATTGCGTGCAA AGTTGTTGAACAAGAAGCGGCACAAGGAGAAGGTGCAGATGAAGAAGACT AGGGCGATGCACGAGGAGAAGAAAGGGGAGAAGAAAGGAGGGGTGGCCAG GAGTGATACTGCGCTGCCTTCGTACCTGCTGGATCGAGAGGGTGTGAGTC GAGCAAAAGTGTTGAGCAATACCGTGAAGCAGAAACGCAAGGAAAAGGCT GGGAAGTGGAGCGTTCCCATTCCCAAAGTGAAGCCAGTGGCGGATTCTGA ATTGTTCCGCATCGAGGCGAGTGGGAAGCGGAAGAAAAAGGCGTGGAAGC GGGTTGTGACCAAGGTGACCTATGTTGGGGAGGGTTTTGTGCGGAAACCA CCGAAATACGAACGGTTCGTGCGACCAATGGCGCTGCGATTCAAAAAAGC CCACGTCACTCACCCCGAACTCCAAGCCACCTTTTGCCTCGATATCCTCG GCGTCAAGAAGAACCCGTCCTCCTCCCTCTACACGCAGCTGGGCGTCATC ACGAAAGGAACCATCATCGAAGTCAACGTCACCGATCTCGGCCTCGTCAC GCCAACGGGCAAGGTCGTGTGGGGAAAATACGCGCAAGTCACAAACAACC CAGAATTGGACGGGTGCATCAACGCCGTTTTGCTCGTCTGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig84788:62..802-

>mRNA_M-pyrifera_M_contig84788.19755.1 ID=mRNA_M-pyrifera_M_contig84788.19755.1|Name=mRNA_M-pyrifera_M_contig84788.19755.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1482bp|location=Sequence derived from alignment at M-pyrifera_M_contig84788:62..802- (Macrocystis pyrifera P11B4 male)
ATGTGGTTTTGGGTTTGTTTTTGTTTCAGTCGAAAGAAGGAAGCGCGTAG
GGCACATGAGGTGAGTCGAGATGCGAAGAGGCTGCATGGATTGCGTGCAA
AGTTGTTGAACAAGAAGCGGCACAAGGAGAAGGTGCAGATGAAGAAGACT
AGGGCGATGCACGAGGAGAAGAAAGGGGAGAAGAAAGGAGGGGTGGCCAG
GAGTGATACTGCGCTGCCTTCGTACCTGCTGGATCGAGAGGGTGTGAGTC
GAGCAAAAGTGTTGAGCAATACCGTGAAGCAGAAACGCAAGGAAAAGGCT
GGGAAGTGGAGCGTTCCCATTCCCAAAGTGAAGCCAGTGGCGGATTCTGA
ATTGTTCCGCATCGAGGCGAGTGGGAAGCGGAAGAAAAAGGCGTGGAAGC
GGGTTGTGACCAAGGTGACCTATGTTGGGGAGGGTTTTGTGCGGAAACCA
CCGAAATACGAACGGTTCGTGCGACCAATGGCGCTGCGATTCAAAAAAGC
CCACGTCACTCACCCCGAACTCCAAGCCACCTTTTGCCTCGATATCCTCG
GCGTCAAGAAGAACCCGTCCTCCTCCCTCTACACGCAGCTGGGCGTCATC
ACGAAAGGAACCATCATCGAAGTCAACGTCACCGATCTCGGCCTCGTCAC
GCCAACGGGCAAGGTCGTGTGGGGAAAATACGCGCAAGTCACAAACAACC
CAGAATTGGACGGGTGCATCAACGCCGTTTTGCTCGTCTGAATGTGGTTT
TGGGTTTGTTTTTGTTTCAGTCGAAAGAAGGAAGCGCGTAGGGCACATGA
GGTGAGTCGAGATGCGAAGAGGCTGCATGGATTGCGTGCAAAGTTGTTGA
ACAAGAAGCGGCACAAGGAGAAGGTGCAGATGAAGAAGACTAGGGCGATG
CACGAGGAGAAGAAAGGGGAGAAGAAAGGAGGGGTGGCCAGGAGTGATAC
TGCGCTGCCTTCGTACCTGCTGGATCGAGAGGGTGTGAGTCGAGCAAAAG
TGTTGAGCAATACCGTGAAGCAGAAACGCAAGGAAAAGGCTGGGAAGTGG
AGCGTTCCCATTCCCAAAGTGAAGCCAGTGGCGGATTCTGAATTGTTCCG
CATCGAGGCGAGTGGGAAGCGGAAGAAAAAGGCGTGGAAGCGGGTTGTGA
CCAAGGTGACCTATGTTGGGGAGGGTTTTGTGCGGAAACCACCGAAATAC
GAACGGTTCGTGCGACCAATGGCGCTGCGATTCAAAAAAGCCCACGTCAC
TCACCCCGAACTCCAAGCCACCTTTTGCCTCGATATCCTCGGCGTCAAGA
AGAACCCGTCCTCCTCCCTCTACACGCAGCTGGGCGTCATCACGAAAGGA
ACCATCATCGAAGTCAACGTCACCGATCTCGGCCTCGTCACGCCAACGGG
CAAGGTCGTGTGGGGAAAATACGCGCAAGTCACAAACAACCCAGAATTGG
ACGGGTGCATCAACGCCGTTTTGCTCGTCTGA
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