prot_M-pyrifera_M_contig84782.19754.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig84782.19754.1
Unique Nameprot_M-pyrifera_M_contig84782.19754.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length257
Homology
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Match: A0A5A8DDD1_CAFRO (DNA-directed RNA polymerase subunit beta n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DDD1_CAFRO)

HSP 1 Score: 317 bits (811), Expect = 3.540e-96
Identity = 153/251 (60.96%), Postives = 195/251 (77.69%), Query Frame = 0
Query:    8 KEEDAKECSDRFSWLLSQGVVEYIDCLEEEGAMIAMDPNAIDTTRGKRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTGYNQEDSLMLNQSAVDRGFFRSVFYRTYDAAEENIPLPTP-GASSTTLTGPPPGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVGMTTTLPD 257
            +EE   +   R++ L+ +G +E ID  EEEG MIAM    ++      +THCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMG+YASNF  RMDTMA+ LYYPQKP V+T AMEYMHF+ELPAGINSI+AI+ +TGYNQEDSL++NQS++DRGFFRS+FYRTY AAE+N+PLP+  G++  T+ GP   + +QW  FE+P+P   +G +    ++ +D+DG+V PGT V GGD ++G T T+PD
Sbjct:  696 REEIIAQSKSRYTLLMQEGALELIDTEEEEGCMIAMTERDLEEGICSSYTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYASNFTARMDTMAHVLYYPQKPLVATHAMEYMHFRELPAGINSIVAISTFTGYNQEDSLIMNQSSIDRGFFRSIFYRTYSAAEKNVPLPSADGSALLTMPGP---TQKQWDQFEKPNPAITAG-MGNSDFSKLDEDGLVEPGTAVFGGDIIIGKTVTVPD 942          
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Match: A0A5J4NQ19_9TREM (DNA-directed RNA polymerase subunit beta n=1 Tax=Paragonimus westermani TaxID=34504 RepID=A0A5J4NQ19_9TREM)

HSP 1 Score: 289 bits (740), Expect = 4.890e-91
Identity = 148/244 (60.66%), Postives = 175/244 (71.72%), Query Frame = 0
Query:   18 RFSW--LLSQGVVEYIDCLEEEGAMIAMDPNAIDTTRG--KRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTGYNQEDSLMLNQSAVDRGFFRSVFYRTYDAAEENIPLPTPGASSTTLTGPPPGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVGMTTTLPD 257
            R+SW  L+  GVVEYID LEEE  MIAM P  +       K HTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMG+Y SNF  RMDT+AN LYYPQKP V+TR+MEY+ F+ELPAGIN+I+AIA YTGYNQEDS++LN+SA+ RGFFRS FYRTY   E    +                  +Q  +FE+P+P  C G +    Y  +DDDG++APGT V+G D L+G T TLP+
Sbjct:   67 RYSWQDLVLSGVVEYIDTLEEETVMIAMGPAEMQAAVHYCKTHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYISNFHTRMDTLANVLYYPQKPLVATRSMEYLRFRELPAGINAIVAIATYTGYNQEDSVILNESAIQRGFFRSEFYRTYKDQEARHGM------------------DQEEVFEKPNPQQCQG-MRHAIYDKLDDDGLIAPGTRVSGDDVLIGKTITLPE 291          
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Match: A0A8J6HXL3_TENMO (DNA-directed RNA polymerase n=2 Tax=Tenebrio molitor TaxID=7067 RepID=A0A8J6HXL3_TENMO)

HSP 1 Score: 276 bits (707), Expect = 5.640e-90
Identity = 142/246 (57.72%), Postives = 177/246 (71.95%), Query Frame = 0
Query:   19 FSW--LLSQGVVEYIDCLEEEGAMIAMDPNAIDTTRG----KRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTGYNQEDSLMLNQSAVDRGFFRSVFYRTY-DAAEENIPLPTPGASSTTLTGPPPGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVGMTTTLPD 257
            + W  L++ GVVEYID LEEE  MIAM P+ +   +       +THCEIHP+MILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+Y +NF VRMDT+A+ LYYP KP V+TR+MEY+ F+ELPAGINSI+AIACYTGYNQEDS++LN SAV+RGFFRSVFYR+Y DA  + I                 G  E+   FE+P+   C G +    Y  +DDDG+++PG  V+G D ++G T TLP+
Sbjct:   10 YGWQVLVASGVVEYIDTLEEETVMIAMSPDDLRQEKEYAYCTTYTHCEIHPAMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPHKPLVTTRSMEYLRFRELPAGINSIVAIACYTGYNQEDSVILNASAVERGFFRSVFYRSYKDAESKRI-----------------GDQEE--QFEKPTRQTCQG-MRNALYDKLDDDGIISPGIRVSGDDVVIGKTMTLPE 235          
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Match: A0A183JFR7_9TREM (DNA-directed RNA polymerase n=2 Tax=Platyhelminthes TaxID=6157 RepID=A0A183JFR7_9TREM)

HSP 1 Score: 289 bits (739), Expect = 2.480e-88
Identity = 147/244 (60.25%), Postives = 175/244 (71.72%), Query Frame = 0
Query:   18 RFSW--LLSQGVVEYIDCLEEEGAMIAMDPNAIDTTRG--KRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTGYNQEDSLMLNQSAVDRGFFRSVFYRTYDAAEENIPLPTPGASSTTLTGPPPGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVGMTTTLPD 257
            R+SW  L+  GVVEYID LEEE  MIAM P  +       K HTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMG+Y SNF  RMDT+AN LYYPQKP V+TR+MEY+ F+ELPAGIN+I+AIA YTGYNQEDS+++N+SA+ RGFFRS FYRTY   E    +                  +   +FE+P+P NC G +    Y  +DDDG++APGT V+G D L+G T TLP+
Sbjct:  630 RYSWQDLVFSGVVEYIDTLEEETVMIAMGPAEMQAAVNYCKTHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYISNFHTRMDTLANVLYYPQKPLVATRSMEYLRFRELPAGINAIVAIATYTGYNQEDSVIINESAIQRGFFRSEFYRTYKDQETRHGM------------------DLEEVFEKPNPQNCQG-MRHAIYDKLDDDGLIAPGTRVSGDDVLIGKTITLPE 854          
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Match: A0A0S7LL30_9TELE (DNA-directed RNA polymerase n=5 Tax=Euteleostomi TaxID=117571 RepID=A0A0S7LL30_9TELE)

HSP 1 Score: 278 bits (712), Expect = 1.310e-87
Identity = 141/244 (57.79%), Postives = 174/244 (71.31%), Query Frame = 0
Query:   19 FSW--LLSQGVVEYIDCLEEEGAMIAMDPNAID---TTRGKRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTGYNQEDSLMLNQSAVDRGFFRSVFYRTYDAAEENIPLPTPGASSTTLTGPPPGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVGMTTTLPD 257
             SW  L++ GVVEYID LEEE  M+AM P+ +          +THCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+Y +NF VRMDT+A+ LYYPQKP V+TR+MEY+ F+ELPAGINSI+AIA YTGYNQEDS+++N+SAVDRGFFRSVFYR+Y   E                       +Q  +FE+P+   C G +    Y  +DDDG++APG  V+G D ++G T TLP+
Sbjct:    6 LSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKKGF------------------DQEEIFEKPTRETCQG-MRHAIYDKLDDDGLIAPGVRVSGEDVIIGKTVTLPE 230          
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Match: A0A7L1D5K7_9PASS (DNA-directed RNA polymerase subunit beta (Fragment) n=3 Tax=Sauria TaxID=32561 RepID=A0A7L1D5K7_9PASS)

HSP 1 Score: 279 bits (713), Expect = 7.880e-87
Identity = 141/244 (57.79%), Postives = 175/244 (71.72%), Query Frame = 0
Query:   19 FSW--LLSQGVVEYIDCLEEEGAMIAMDPNAID---TTRGKRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTGYNQEDSLMLNQSAVDRGFFRSVFYRTYDAAEENIPLPTPGASSTTLTGPPPGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVGMTTTLPD 257
            +SW  L++ GVVEYID LEEE  M+AM P+ +          +THCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+Y +NF VRMDT+A+ LYYPQKP V+TR+MEY+ F+ELPAGINSI+AIA YTGYNQEDS+++N+SAVDRGFFRSVFYR+Y   E                       +Q  +FE+P+   C G +    Y  +DDDG++APG  V+G D ++G T TLP+
Sbjct:   91 YSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQEFKK------------------GYDQEEVFEKPTRETCQG-MRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPE 315          
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Match: A0A3Q0KLS8_SCHMA (DNA-directed RNA polymerase subunit beta n=20 Tax=Platyhelminthes TaxID=6157 RepID=A0A3Q0KLS8_SCHMA)

HSP 1 Score: 289 bits (739), Expect = 1.330e-86
Identity = 147/244 (60.25%), Postives = 175/244 (71.72%), Query Frame = 0
Query:   18 RFSW--LLSQGVVEYIDCLEEEGAMIAMDPNAIDTTRG--KRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTGYNQEDSLMLNQSAVDRGFFRSVFYRTYDAAEENIPLPTPGASSTTLTGPPPGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVGMTTTLPD 257
            R+SW  L+  GVVEYID LEEE  MIAM P  +       K HTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMG+Y SNF  RMDT+AN LYYPQKP V+TR+MEY+ F+ELPAGIN+I+AIA YTGYNQEDS+++N+SA+ RGFFRS FYRTY   E    +                  +   +FE+P+P NC G +    Y  +DDDG++APGT V+G D L+G T TLP+
Sbjct:  668 RYSWQDLVLSGVVEYIDTLEEETVMIAMGPAEMQAAVNYCKTHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGVYISNFHTRMDTLANVLYYPQKPLVATRSMEYLRFRELPAGINAIVAIATYTGYNQEDSVIINESAIQRGFFRSEFYRTYKDQETRHGM------------------DLEEVFEKPNPQNCQG-MRHAIYDKLDDDGLIAPGTRVSGDDVLIGKTITLPE 892          
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Match: A0A2P4SJJ2_BAMTH (DNA-directed RNA polymerase (Fragment) n=1 Tax=Bambusicola thoracicus TaxID=9083 RepID=A0A2P4SJJ2_BAMTH)

HSP 1 Score: 280 bits (716), Expect = 1.500e-86
Identity = 141/244 (57.79%), Postives = 175/244 (71.72%), Query Frame = 0
Query:   19 FSW--LLSQGVVEYIDCLEEEGAMIAMDPNAID---TTRGKRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTGYNQEDSLMLNQSAVDRGFFRSVFYRTYDAAEENIPLPTPGASSTTLTGPPPGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVGMTTTLPD 257
            +SW  L++ GVVEYID LEEE  M+AM P+ +          +THCEIHPSMILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+Y +NF VRMDT+A+ LYYPQKP V+TR+MEY+ F+ELPAGINSI+AIA YTGYNQEDS+++N+SAVDRGFFRSVFYR+Y   E                       +Q  +FE+P+   C G +    Y  +DDDG++APG  V+G D ++G T TLP+
Sbjct:  406 YSWQDLVASGVVEYIDTLEEETVMLAMTPDDLQEKGVAYCSTYTHCEIHPSMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYITNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFRELPAGINSIVAIASYTGYNQEDSVIMNRSAVDRGFFRSVFYRSYKEQESKK------------------GYDQEEVFEKPTRETCQG-MRHAIYDKLDDDGLIAPGVRVSGDDVIIGKTVTLPE 630          
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Match: A0A2H2ITX3_CAEJA (DNA-directed RNA polymerase n=1 Tax=Caenorhabditis japonica TaxID=281687 RepID=A0A2H2ITX3_CAEJA)

HSP 1 Score: 266 bits (680), Expect = 3.510e-86
Identity = 135/250 (54.00%), Postives = 174/250 (69.60%), Query Frame = 0
Query:   16 SDRFSW--LLSQGVVEYIDCLEEEGAMIAMDPNAI------DTTRGKRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTGYNQEDSLMLNQSAVDRGFFRSVFYRTYDAAEENIPLPTPGASSTTLTGPPPGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVGMTTTLPD 257
            S++++W  L+  GVVE ID +EEE +MIAM P  +      DT     HTHCEIHP+MILG+CASIIPFPDHNQSPRNTYQSAMGKQAMG+Y +NF VRMDT+A+ LYYPQKP V+TR+MEY+ F ELPAGIN+I+AI  Y+GYNQEDS+++N SA+DRG FRSVFYR+Y   E N+  P                     + E+P+   CSG +    Y  +D+DG+++PG  V+G D ++G T  +PD
Sbjct:    5 SNKYAWSDLVGGGVVELIDSMEEETSMIAMMPEDLRIGGYCDT-----HTHCEIHPAMILGVCASIIPFPDHNQSPRNTYQSAMGKQAMGVYTTNFHVRMDTLAHVLYYPQKPLVTTRSMEYLRFNELPAGINAIVAILSYSGYNQEDSVIMNNSAIDRGLFRSVFYRSYRDNEANLDNPNE------------------ELIEKPTRDKCSG-MRHSLYDKLDEDGIISPGMRVSGDDVIIGKTVAVPD 230          
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Match: A0A662XQG4_9STRA (DNA-directed RNA polymerase subunit beta n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XQG4_9STRA)

HSP 1 Score: 284 bits (727), Expect = 4.240e-86
Identity = 155/256 (60.55%), Postives = 184/256 (71.88%), Query Frame = 0
Query:    1 MQLEDDIKEEDAKECSDRFSWLLSQGVVEYIDCLEEEGAMIAMDPNAIDTTRGKRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYASNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTGYNQEDSLMLNQSAVDRGFFRSVFYRTYDAAEENIPLPTPGASSTTLTGPPPGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVGMTTTLP 256
            +Q E  +K ++ K  + R+  LL+ GVVE ID  EEE  MIAM+P  + T   + HTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIY SNF  RMDTMAN L YPQKP V+TRAMEY+HF+ELP+GIN+I+ IA YTGYNQEDSL++NQSA+DRGFFRS FYR Y   E N   P  GA      G    + E+   FE+PS  NC G +    Y  +D DG+VAPGT V+G D ++G T+ LP
Sbjct:  396 LQKEQVVKLQNHKITNYRWHNLLTDGVVELIDTEEEEVCMIAMEPKDVGTGT-QIHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYCSNFRARMDTMANVLNYPQKPLVTTRAMEYLHFRELPSGINAIVGIASYTGYNQEDSLIMNQSAIDRGFFRSTFYRCYVDQERNK-SPHGGAGG----GAGGSNCEE---FEKPSRENCLG-LRHGSYHKLDADGLVAPGTRVSGNDIIIGKTSPLP 641          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84782.19754.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8DDD1_CAFRO3.540e-9660.96DNA-directed RNA polymerase subunit beta n=4 Tax=C... [more]
A0A5J4NQ19_9TREM4.890e-9160.66DNA-directed RNA polymerase subunit beta n=1 Tax=P... [more]
A0A8J6HXL3_TENMO5.640e-9057.72DNA-directed RNA polymerase n=2 Tax=Tenebrio molit... [more]
A0A183JFR7_9TREM2.480e-8860.25DNA-directed RNA polymerase n=2 Tax=Platyhelminthe... [more]
A0A0S7LL30_9TELE1.310e-8757.79DNA-directed RNA polymerase n=5 Tax=Euteleostomi T... [more]
A0A7L1D5K7_9PASS7.880e-8757.79DNA-directed RNA polymerase subunit beta (Fragment... [more]
A0A3Q0KLS8_SCHMA1.330e-8660.25DNA-directed RNA polymerase subunit beta n=20 Tax=... [more]
A0A2P4SJJ2_BAMTH1.500e-8657.79DNA-directed RNA polymerase (Fragment) n=1 Tax=Bam... [more]
A0A2H2ITX3_CAEJA3.510e-8654.00DNA-directed RNA polymerase n=1 Tax=Caenorhabditis... [more]
A0A662XQG4_9STRA4.240e-8660.55DNA-directed RNA polymerase subunit beta n=2 Tax=N... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037033DNA-directed RNA polymerase, subunit 2, hybrid-binding domain superfamilyGENE3D2.40.270.10coord: 69..183
e-value: 2.0E-38
score: 134.1
IPR007647RNA polymerase Rpb2, domain 5PFAMPF04567RNA_pol_Rpb2_5coord: 19..63
e-value: 9.6E-15
score: 54.9
IPR007120DNA-directed RNA polymerase, subunit 2, hybrid-binding domainPFAMPF00562RNA_pol_Rpb2_6coord: 70..253
e-value: 3.6E-38
score: 131.7
IPR014724RNA polymerase Rpb2, OB-foldGENE3D2.40.50.150coord: 200..257
e-value: 6.6E-7
score: 31.0
IPR015712DNA-directed RNA polymerase, subunit 2PANTHERPTHR20856DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2coord: 8..256
NoneNo IPR availablePANTHERPTHR20856:SF7DNA-DIRECTED RNA POLYMERASE II SUBUNIT RPB2coord: 8..256
NoneNo IPR availableSUPERFAMILY64484beta and beta-prime subunits of DNA dependent RNA-polymerasecoord: 15..256

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84782contigM-pyrifera_M_contig84782:24..794 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84782.19754.1mRNA_M-pyrifera_M_contig84782.19754.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig84782 24..794 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig84782.19754.1 ID=prot_M-pyrifera_M_contig84782.19754.1|Name=mRNA_M-pyrifera_M_contig84782.19754.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=257bp
MQLEDDIKEEDAKECSDRFSWLLSQGVVEYIDCLEEEGAMIAMDPNAIDT
TRGKRHTHCEIHPSMILGICASIIPFPDHNQSPRNTYQSAMGKQAMGIYA
SNFIVRMDTMANCLYYPQKPAVSTRAMEYMHFKELPAGINSIIAIACYTG
YNQEDSLMLNQSAVDRGFFRSVFYRTYDAAEENIPLPTPGASSTTLTGPP
PGSTEQWVMFERPSPGNCSGRILEERYAVMDDDGMVAPGTLVTGGDALVG
MTTTLPD
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037033DNA-dir_RNAP_su2_hyb_sf
IPR007647RNA_pol_Rpb2_5
IPR007120DNA-dir_RNAP_su2_dom
IPR014724RNA_pol_RPB2_OB-fold
IPR015712DNA-dir_RNA_pol_su2