prot_M-pyrifera_M_contig8474.19743.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8474.19743.1
Unique Nameprot_M-pyrifera_M_contig8474.19743.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length193
Homology
BLAST of mRNA_M-pyrifera_M_contig8474.19743.1 vs. uniprot
Match: D8LSM3_ECTSI (Co-chaperone grpE family protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSM3_ECTSI)

HSP 1 Score: 202 bits (515), Expect = 2.510e-61
Identity = 104/137 (75.91%), Postives = 118/137 (86.13%), Query Frame = 0
Query:   57 VDPMAEVKQQIKDLEKELQRAENKLADANDAITEKGQMGFLRMAAKVDNFRKKSGSGTGEYESDAKAAVLKAMLPAFAPFEAAEAELTLETENEIKFNGNYQALYRQLKDVYTKIGASDFFGVVGEKFESRRHIKVS 193
            VDPMAEVKQQIKDLEKEL + EN+L D  D++ EKGQMGFLRMAA+VDNFRK SG+GTG+YE+DAKAAVL+AMLPAF PFEAAE  L L TE E+K+N +YQALYRQLKDV+TKIGA+DFFGVVGEKF   RH K S
Sbjct:  108 VDPMAEVKQQIKDLEKELMKEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLATETEVKYNKSYQALYRQLKDVFTKIGATDFFGVVGEKFVYTRHEKAS 244          
BLAST of mRNA_M-pyrifera_M_contig8474.19743.1 vs. uniprot
Match: A0A6H5KMN5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMN5_9PHAE)

HSP 1 Score: 174 bits (441), Expect = 9.960e-52
Identity = 86/118 (72.88%), Postives = 101/118 (85.59%), Query Frame = 0
Query:   76 RAENKLADANDAITEKGQMGFLRMAAKVDNFRKKSGSGTGEYESDAKAAVLKAMLPAFAPFEAAEAELTLETENEIKFNGNYQALYRQLKDVYTKIGASDFFGVVGEKFESRRHIKVS 193
            + EN+L D  D++ EKGQMGFLRMAA+VDNFRK SG+GTG+YE+DAKAAVL+AMLPAF PFEAAE  L LETE E+K+N +YQALYRQLKDV+TK+GA+DFFGVVGEKF   RH K S
Sbjct:    2 KEENRLRDVQDSVQEKGQMGFLRMAAQVDNFRKSSGAGTGDYEADAKAAVLRAMLPAFEPFEAAEEALNLETETEVKYNKSYQALYRQLKDVFTKVGATDFFGVVGEKFVYTRHEKAS 119          
BLAST of mRNA_M-pyrifera_M_contig8474.19743.1 vs. uniprot
Match: A0A835ZD01_9STRA (GrpE-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZD01_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 8.900e-17
Identity = 46/91 (50.55%), Postives = 59/91 (64.84%), Query Frame = 0
Query:  105 NFRKKSGSGTGEYESDAKAAVLKAMLPAFAPFEAA---EAELTLETENEIKFNGNYQALYRQLKDVYTKIGASDFFGVVGEKFESRRHIKV 192
            N+RK+      + +++A A VL++  P    FEA    E +L LETE E  FN NYQALYRQL DVYTK+G +DFFGV GE ++  RH KV
Sbjct:   93 NYRKRRNLDQKKLQAEAMARVLRSFEPVLEAFEAVVDGETDLKLETEQEQMFNSNYQALYRQLADVYTKLGVTDFFGVQGETYDGIRHEKV 183          
BLAST of mRNA_M-pyrifera_M_contig8474.19743.1 vs. uniprot
Match: A0A7S2V060_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V060_9STRA)

HSP 1 Score: 63.2 bits (152), Expect = 1.910e-8
Identity = 45/142 (31.69%), Postives = 74/142 (52.11%), Query Frame = 0
Query:   56 EVDPMAEVKQQIKDLEKELQRAENKLADANDAITEKGQMGFLRMAAKVDNFRKKSGSGTGEYESDAKAAVLKAMLPAFAPFEA----AEAELTLETENEIKFNGNYQALYRQLKDVYTKIGASDFFGVVGEKFESRRHIKVS 193
            E DP+AE+KQQI+               +   I + G+ G++ +AA+ DN+++ S S      + A A V+   +P    FEA    AEA   L +E+ +K + NYQAL RQ+  ++  +GAS F   VG + +  +++  S
Sbjct:   96 EADPLAELKQQIEXXXXXXXXXXXXXXISKRKILDNGKTGYVTIAAEADNYKRSSKSTIDSLGTRAMAEVISDFMPLVDKFEAIKETAEATENL-SEDVLKIHRNYQALPRQMMTIFEGLGASSFDATVGSQIDPIKNVASS 236          
BLAST of mRNA_M-pyrifera_M_contig8474.19743.1 vs. uniprot
Match: A0A7S1T8I4_9CHLO (GrpE protein homolog n=2 Tax=Tetraselmis chuii TaxID=63592 RepID=A0A7S1T8I4_9CHLO)

HSP 1 Score: 58.2 bits (139), Expect = 1.110e-6
Identity = 33/94 (35.11%), Postives = 50/94 (53.19%), Query Frame = 0
Query:   96 FLRMAAKVDNFRKKSGSGTGEYESDAKAAVLKAMLPAFAPFEAAEAELTLETENEIKFNGNYQALYRQLKDVYTKIGASDFFGVVGEKFESRRH 189
            +LR  A  +NFRK+S           K  V+   LP    FE A  +L LETE E K + +YQA+YRQ+ +++  +G +     VG+ F+  +H
Sbjct:  162 YLRSTADFENFRKRSQIEKDALRDSVKGDVVSDFLPLVDNFELASKQLKLETEAEKKIDASYQAMYRQMVEIFKNLGVTAV-ETVGKPFDPEKH 254          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8474.19743.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 5
Match NameE-valueIdentityDescription
D8LSM3_ECTSI2.510e-6175.91Co-chaperone grpE family protein n=1 Tax=Ectocarpu... [more]
A0A6H5KMN5_9PHAE9.960e-5272.88Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZD01_9STRA8.900e-1750.55GrpE-domain-containing protein n=1 Tax=Tribonema m... [more]
A0A7S2V060_9STRA1.910e-831.69Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7S1T8I4_9CHLO1.110e-635.11GrpE protein homolog n=2 Tax=Tetraselmis chuii Tax... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 60..94
NoneNo IPR availableCOILSCoilCoilcoord: 26..54
NoneNo IPR availablePANTHERPTHR21237:SF4GRPE PROTEIN HOMOLOGcoord: 58..171
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 16..193
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..15
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..10
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 11..15
IPR000740GrpE nucleotide exchange factorPFAMPF01025GrpEcoord: 49..189
e-value: 1.1E-8
score: 35.0
IPR000740GrpE nucleotide exchange factorPANTHERPTHR21237GRPE PROTEINcoord: 58..171
IPR013805GrpE nucleotide exchange factor, coiled-coilSUPERFAMILY58014Coiled-coil domain of nucleotide exchange factor GrpEcoord: 66..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8474contigM-pyrifera_M_contig8474:128..8075 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8474.19743.1mRNA_M-pyrifera_M_contig8474.19743.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8474 128..8075 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8474.19743.1 ID=prot_M-pyrifera_M_contig8474.19743.1|Name=mRNA_M-pyrifera_M_contig8474.19743.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=193bp
AAAAAAAVAAAEAEAAAVAGAPEAAEDEAAAIAANSTEEVEEEEEEEGEE
EEEKEEVDPMAEVKQQIKDLEKELQRAENKLADANDAITEKGQMGFLRMA
AKVDNFRKKSGSGTGEYESDAKAAVLKAMLPAFAPFEAAEAELTLETENE
IKFNGNYQALYRQLKDVYTKIGASDFFGVVGEKFESRRHIKVS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000740GrpE
IPR013805GrpE_coiled_coil