prot_M-pyrifera_M_contig84421.19685.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig84421.19685.1
Unique Nameprot_M-pyrifera_M_contig84421.19685.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length86
Homology
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BLAST of mRNA_M-pyrifera_M_contig84421.19685.1 vs. uniprot
Match: A0A8J9S112_9CHLO (Probable EKC/KEOPS complex subunit LAGE3 n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9S112_9CHLO)

HSP 1 Score: 56.6 bits (135), Expect = 2.850e-8
Identity = 26/67 (38.81%), Postives = 44/67 (65.67%), Query Frame = 0 
Query:   16 SEEHADIMKESLEAEGDLRPHLSHTKFSVEGSTLHVSVAAANPRALRANISSFYDMAGVTARTLAEF 82
            SE  A +++++L  + +LRP L   + +V+G+TLH+  +A + R LRA + +FYD+ G+  RTL  F
Sbjct:   54 SEADAQVVRDALAVDPELRPKLVTRELTVDGNTLHIFFSAVDTRTLRAAVGTFYDLLGLATRTLEAF 120
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84421.19685.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A8J9S112_9CHLO2.850e-838.81Probable EKC/KEOPS complex subunit LAGE3 n=1 Tax=C... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.310.50coord: 4..85
e-value: 4.8E-10
score: 41.2
NoneNo IPR availablePANTHERPTHR31283:SF5GEO08993P1coord: 5..83
IPR015419CTAG/Pcc1 familyPFAMPF09341Pcc1coord: 9..79
e-value: 1.2E-12
score: 47.7
IPR015419CTAG/Pcc1 familyPANTHERPTHR31283FAMILY NOT NAMEDcoord: 5..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig84421contigM-pyrifera_M_contig84421:365..622 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig84421.19685.1mRNA_M-pyrifera_M_contig84421.19685.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig84421 365..622 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig84421.19685.1 ID=prot_M-pyrifera_M_contig84421.19685.1|Name=mRNA_M-pyrifera_M_contig84421.19685.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=86bp
LFPSDFYSNITVRMLSEEHADIMKESLEAEGDLRPHLSHTKFSVEGSTLH
VSVAAANPRALRANISSFYDMAGVTARTLAEFAEF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR015419CTAG/Pcc1