prot_M-pyrifera_M_contig84172.19637.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig84172.19637.1
Unique Name	prot_M-pyrifera_M_contig84172.19637.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	231

Homology

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BLAST of mRNA_M-pyrifera_M_contig84172.19637.1 vs. uniprot
Match: UPI0003607A3A (FG-GAP-like repeat-containing protein n=1 Tax=Balneola vulgaris TaxID=287535 RepID=UPI0003607A3A)

HSP 1 Score: 83.2 bits (204), Expect = 1.210e-14
Identity = 73/154 (47.40%), Postives = 90/154 (58.44%), Query Frame = 0

Query:    1 MNGDGFIDIVQANISTDSLHVFLNTGSGTFGTSIGYETADSFGPLAFADVDQDDDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAIAVANLNSTVGKIDAIVVNIHDDNVSRYQDGSGVQFFDWDNYTVGEEPTWITTADLDGDGD 154
            MNGDGF+DI+Q+NI +DSLHVFLN G+G+F                          XXXXXXXXXXXXXXXXXXXXXXX           PVA+A AN+N T G++DA+V+ +  + V    D  G  +   +  TVG  PTWIT  D+D DGD
Sbjct:  255 MNGDGFVDIIQSNIDSDSLHVFLNDGTGSFXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTSGSSWSVGTNPVALATANVNGTTGRVDAMVLALDVNRVDVNYDQFGASYIGTNTTTVGTSPTWITALDVDSDGD 408

[Close]

BLAST of mRNA_M-pyrifera_M_contig84172.19637.1 vs. uniprot
Match: A0A818IW80_9BILA (Hypothetical protein n=1 Tax=Adineta steineri TaxID=433720 RepID=A0A818IW80_9BILA)

HSP 1 Score: 58.5 bits (140), Expect = 2.250e-6
Identity = 45/158 (28.48%), Postives = 66/158 (41.77%), Query Frame = 0

Query:    2 NGDGFIDIVQANISTDSLHVFLNTGSGTFGTSIGYETADSFGP--LAFADVDQD--DDMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPVAIAVANLNSTVGKIDAIVVNIHDDNVSRYQDGSGVQFFDWDNYTVGE--EPTWITTADLDGDG 153
            +GDG IDIV ANI T+++ +FLN G+GTF T + Y+   S  P  +A  D D D  +D+                                  P  +AV + N   GK D +  N   +N++ + +     F     Y  G   +P  +   D DGDG
Sbjct:  402 DGDGKIDIVTANIGTNTIAIFLNNGAGTFATQVPYDAGSSSQPTGVAVGDFDGDGKNDIVTANSGTNTIGIFLNNGAGAFATQVPYDAGSSSQPTGVAVGDFNGD-GKNDIVTANYGTNNIAIFVNNGTGTFATQVPYDAGSSSQPYSVAVGDFDGDG 558

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig84172.19637.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig84172.19637.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
UPI0003607A3A	1.210e-14	47.40	FG-GAP-like repeat-containing protein n=1 Tax=Baln...	[more]
A0A818IW80_9BILA	2.250e-6	28.48	Hypothetical protein n=1 Tax=Adineta steineri TaxI...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PFAM	PF13517	VCBS	coord: 1..59 e-value: 2.6E-9 score: 37.5 coord: 148..207 e-value: 5.0E-12 score: 46.2
None	No IPR available	PANTHER	PTHR46580	FAMILY NOT NAMED	coord: 1..226
None	No IPR available	SUPERFAMILY	69318	Integrin alpha N-terminal domain	coord: 2..226

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig84172	contig	M-pyrifera_M_contig84172:191..883 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig84172.19637.1	mRNA_M-pyrifera_M_contig84172.19637.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig84172 191..883 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig84172.19637.1 ID=prot_M-pyrifera_M_contig84172.19637.1|Name=mRNA_M-pyrifera_M_contig84172.19637.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=231bp
MNGDGFIDIVQANISTDSLHVFLNTGSGTFGTSIGYETADSFGPLAFADV
DQDDDMDIIALNANNDEFRVYTNNGVGVLSLGSGHTVGDSPVAIAVANLN
STVGKIDAIVVNIHDDNVSRYQDGSGVQFFDWDNYTVGEEPTWITTADLD
GDGDLDAIVANAVDENLSILTNDGSGAFSETTFSTGSTYGNHVLAADVDG
DGDMDIVTSNQDGTFSVIKNYGGGSVSFITP