prot_M-pyrifera_M_contig109394.1963.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig109394.1963.1
Unique Nameprot_M-pyrifera_M_contig109394.1963.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length200
Homology
BLAST of mRNA_M-pyrifera_M_contig109394.1963.1 vs. uniprot
Match: L0DQ77_SINAD (HEAT repeat-containing protein n=3 Tax=Singulisphaera acidiphila TaxID=466153 RepID=L0DQ77_SINAD)

HSP 1 Score: 70.5 bits (171), Expect = 1.220e-10
Identity = 60/200 (30.00%), Postives = 92/200 (46.00%), Query Frame = 0
Query:    8 LGRIGPDATAAIPALNEAMKAQGGQRLIRVAHAL----GQMGPAIIPTMIKDLEGDNRNAREGAVRALGWLNAEAVPAVPQLIVALGDDDAKVHAQAAQTLGRMGPQAEEPLGRALDHEEEPVRVGA-LTALATIGPRT----ADVADRLSQLTTDGSIEQ------RIAALRAVA------ATSIDRDQMLTMLINSLT 186
            LGR+GP A  A+PAL  A+K +     +  A+AL    G+   A++P +   L+ D+ N R  A  AL  +N       P L  AL + D      AA  L R+  Q ++ +    D  ++P+   + LTAL  +GP      + + DRL++   D    Q      R+A   AVA      AT+  R Q + +   +LT
Sbjct: 1394 LGRLGPGAKEAVPALTLALKDKTAAVRVATANALRLIDGEQEAAVVPVLADGLQDDDANVRRAATEALARINPVPAELAPNLTTALEEADGVTRLHAASALARLPGQTDKAVAVLADLLDDPLLCSSSLTALDQLGPTAKGAFSKLVDRLNEAYDDPVFGQLANTLARVAGAEAVAPLLKAHATADTRHQPMVVAALALT 1593          
BLAST of mRNA_M-pyrifera_M_contig109394.1963.1 vs. uniprot
Match: A0A517PWZ1_9PLAN (Putative lyase n=3 Tax=Gimesia TaxID=1649453 RepID=A0A517PWZ1_9PLAN)

HSP 1 Score: 62.8 bits (151), Expect = 4.170e-8
Identity = 59/200 (29.50%), Postives = 88/200 (44.00%), Query Frame = 0
Query:    2 FQSTITLGRIGPDATAAIPALNEAMKAQGGQRLIRVAHALGQMGPAIIPTMIKDLEGDNRNAREGAVRALGWLNAEAVPAVPQLIVALGDDDAKVHAQAAQTLGRMGPQAEEP---LGRALDHEEEPVRVGALTALATIGPRTADVADRLSQL--TTDGSIEQRIAALRAVAATSIDRDQMLTMLINSLTDADEGVRSTA 196
            +++  +L ++GP A  AIP L  A+   G      V +    +GP +            RNA   A+ ++G       P VP LI AL D D    A AA TL ++GP A      L R L+  E  VR  A+ A+A +G     V   L Q     D     R++ L ++A        ++ +LI +L D+D  V + A
Sbjct:   43 YKAARSLQKLGPTAEPAIPPLIAALNDLGAPTKYDVQY----LGPRV------------RNAASDALASIGR------PTVPALIKALRDKDPATRAMAADTLAKLGPDANASFAELSRTLNDPESWVRDSAVAAIARVGAAPQVVVPLLEQKYRRADKDDYIRVSILESLANADPQATMVMPLLIEALDDSDGDVMAAA 220          
BLAST of mRNA_M-pyrifera_M_contig109394.1963.1 vs. uniprot
Match: A0A7Y2F527_9BACT (Uncharacterized protein n=1 Tax=Pirellulaceae bacterium TaxID=2699754 RepID=A0A7Y2F527_9BACT)

HSP 1 Score: 59.7 bits (143), Expect = 5.400e-7
Identity = 35/83 (42.17%), Postives = 47/83 (56.63%), Query Frame = 0
Query:   64 REGAVRALGWLNAEAVPAVPQLIVALGDDDAKVHAQAAQTLGRMGPQAEEPLGRALDHEEEPVRVGALTALATIGPRTADVAD 146
            R  A+ +LGW+NA A  AVP L  A  D++  V  QAA +L R+GP A+  L R LD ++E VR  + T L  +    A V D
Sbjct:  151 RVAALDSLGWMNAHAPRAVPILADATSDENDDVRRQAAWSLSRIGPAAQNALTRGLDSDDEEVRAISATGLGKLDQLPASVRD 233          
BLAST of mRNA_M-pyrifera_M_contig109394.1963.1 vs. uniprot
Match: A0A5S9IRK7_9BACT (Uncharacterized protein n=1 Tax=Candidatus Uabimicrobium amorphum TaxID=2596890 RepID=A0A5S9IRK7_9BACT)

HSP 1 Score: 56.2 bits (134), Expect = 7.930e-6
Identity = 36/146 (24.66%), Postives = 70/146 (47.95%), Query Frame = 0
Query:    3 QSTITLGRIGPDATAAIPALNEAMKAQGGQRLIRVAHALGQMGPAIIPTMIKDLEGDNRNAREGAVRALGWLNAEAVPAVPQLIVALGDDDAKVHAQAAQTLGRMGPQAEE---PLGRALDHEEEPVRVGALTALATIGPRTADVA 145
             S + LG+IGPDA++A+P L E + ++  + ++R    L Q+G   +P + + L   ++N +   +R L  + ++   A   ++  L  +D +V       L R+   A E    L + +  E+   R+  +     +G R  D+A
Sbjct:   47 SSIVELGKIGPDASSAVPLLIECLSSKNSRIVLRTIRTLQQIGTRGLPDLQEALHRKDKNIQRKILRVLCGIESQFELASFDVVALLQSEDVRVRIYTLNLLERLPSHAAEVVPELSQIIVSEDPEQRMAVVKVFCALGKRVMDMA 192          
BLAST of mRNA_M-pyrifera_M_contig109394.1963.1 vs. uniprot
Match: B7K6K0_RIPO1 (HEAT domain containing protein n=1 Tax=Rippkaea orientalis (strain PCC 8801) TaxID=41431 RepID=B7K6K0_RIPO1)

HSP 1 Score: 54.7 bits (130), Expect = 1.740e-5
Identity = 57/189 (30.16%), Postives = 86/189 (45.50%), Query Frame = 0
Query:   19 IPALNEAMKAQGGQRLIRVAHALGQMGPAIIPTMIKDLEG-DNRNAREGAVRALGWLNAEAVPAVPQLIVA-LGDDDAKVHAQAAQTLGRMGPQAEEPLGRALDHEEEP--VRVGALTALATIGPRTADVADRLSQLTTDGSIEQRIAALRAVA--ATSIDRDQMLTMLINSLTDADEGVR--STAIVG 199
            + +L E +    G   +R A  LG++G    P ++  L    N   R  A + L  +       +PQLI + L D+D  V   +   L RMG     PL   L   + P   +  A  ALA IGP+       L+Q  +  S   R A + A+A  A S    ++L +L+NSL+D D  VR  + A++G
Sbjct:   36 LKSLVECLGDTRGMTRLRAAQTLGEIGQPATPFLLDALANHSNVVVRRAAAKTLTLIADPQT--IPQLIESFLNDEDTVVQGSSVGALARMGEAGVFPLLNILGSPDVPESAKGHAAWALAFIGPQAKQ---HLNQAVSHDSPVVRAAVVGAIAKVAASEPDQELLDILVNSLSDPDSNVRCETAAVLG 219          
BLAST of mRNA_M-pyrifera_M_contig109394.1963.1 vs. uniprot
Match: A0A3E1EQC2_9BACT (HEAT repeat n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A3E1EQC2_9BACT)

HSP 1 Score: 53.1 bits (126), Expect = 9.060e-5
Identity = 32/76 (42.11%), Postives = 41/76 (53.95%), Query Frame = 0
Query:   36 RVAHALGQMGPAIIPTMIKDLEGDNRNAREGAVRALGWLNAEAVPAVPQLIVALGDDDAKVHAQAAQTLGRMGPQA 111
            R A ALG+     +P ++  L G+NR+AR GA+ ALG L   A  A PQL   L + D  V   AA  L  +GP A
Sbjct:  486 RSAAALGKRDGDHLPVLLTMLAGENRDARYGAIEALGALGPRADAAAPQLRALLTNSDVWVQCLAAAALPELGPDA 561          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109394.1963.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
L0DQ77_SINAD1.220e-1030.00HEAT repeat-containing protein n=3 Tax=Singulispha... [more]
A0A517PWZ1_9PLAN4.170e-829.50Putative lyase n=3 Tax=Gimesia TaxID=1649453 RepID... [more]
A0A7Y2F527_9BACT5.400e-742.17Uncharacterized protein n=1 Tax=Pirellulaceae bact... [more]
A0A5S9IRK7_9BACT7.930e-624.66Uncharacterized protein n=1 Tax=Candidatus Uabimic... [more]
B7K6K0_RIPO11.740e-530.16HEAT domain containing protein n=1 Tax=Rippkaea or... [more]
A0A3E1EQC2_9BACT9.060e-542.11HEAT repeat n=1 Tax=Verrucomicrobia bacterium TaxI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004155PBS lyase HEAT-like repeatSMARTSM00567EZ_HEATcoord: 124..155
e-value: 920.0
score: 0.9
coord: 61..92
e-value: 47.0
score: 11.3
coord: 94..122
e-value: 0.71
score: 18.9
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 45..200
e-value: 1.6E-25
score: 91.6
NoneNo IPR availablePFAMPF13646HEAT_2coord: 82..154
e-value: 1.7E-8
score: 34.8
NoneNo IPR availablePANTHERPTHR12697:SF5DEOXYHYPUSINE HYDROXYLASEcoord: 7..108
coord: 81..200
NoneNo IPR availablePANTHERPTHR12697PBS LYASE HEAT-LIKE PROTEINcoord: 7..108
coord: 81..200
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 46..200

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig109394contigM-pyrifera_M_contig109394:3..602 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig109394.1963.1mRNA_M-pyrifera_M_contig109394.1963.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig109394 3..602 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig109394.1963.1 ID=prot_M-pyrifera_M_contig109394.1963.1|Name=mRNA_M-pyrifera_M_contig109394.1963.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=200bp
WFQSTITLGRIGPDATAAIPALNEAMKAQGGQRLIRVAHALGQMGPAIIP
TMIKDLEGDNRNAREGAVRALGWLNAEAVPAVPQLIVALGDDDAKVHAQA
AQTLGRMGPQAEEPLGRALDHEEEPVRVGALTALATIGPRTADVADRLSQ
LTTDGSIEQRIAALRAVAATSIDRDQMLTMLINSLTDADEGVRSTAIVGL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004155PBS_lyase_HEAT
IPR011989ARM-like
IPR016024ARM-type_fold