prot_M-pyrifera_M_contig8413.19631.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig8413.19631.1
Unique Nameprot_M-pyrifera_M_contig8413.19631.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length435
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig8413.19631.1 vs. uniprot
Match: D8LSZ4_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSZ4_ECTSI)

HSP 1 Score: 349 bits (895), Expect = 6.000e-114
Identity = 229/441 (51.93%), Postives = 260/441 (58.96%), Query Frame = 0 
Query:    2 RVRWRWPCFSLALLLAYTVGS-LLFLSPPPRPVGAVTGAAGT-----STTWGARIRSAAGVDSIVFIALGPAARSTSLLYALSSLREEGRWDGPVHVIVEREGDLDCLSSHMRGGVTTIAVVPPD-----GGXXXXWDGDGDSDGVAINAKLIKMQLFDLLPASVQRVVYVDCDVITQQPLGPYLAAVAREWGDVDEKAAAIMKAAVTVEEAATAREVNKGLAVLPAESSSSLRKREGGAIEGPRLPPTSSPPSAAGEAPGSPATAGTKXXXXXXXXXXXXXGMTSTLIIFPDAGGHKFPVCAGCDMAHSGVVALARGHSERCLQLWHDAFVGKNGDGXXXXXXXXXXXXXXXXXXXTDQEALDIALRKGSGCEARWVDRGHLHFMKDLFVMAGLTRTSTFAHFTGLLHPERLSFFYLRHYEWSLGRSVDEWGQGEVRACA 431
            R R R    +LALLL Y V S +LFL PP  PVG  T  + T      T    R+RSA+G DSIVF+ALGPAARS SLLYAL+SLREEG WDG VHV+VERE DL CLSS++R  VT IA+ P       GG      G GD+ GV  NAK+ KM+L DLLP SV+RVVYVDCDV+TQ+PLGP+L AVAREW ++D KA                                                                      XXXXXXXXXXXXX    T++IF DAGGH  PVC GCD AHSGVVALARGHSERCL+LWHDAF    GDG                   TDQEALD AL +GSGCEA  + R HL FMKD FVMAGLTRTSTF H+TGLLHP+ L   Y R YEW+LG S +EWGQGE++ CA
Sbjct:    3 RARRRCWSVALALLLTYAVVSTVLFLRPPLHPVGPSTKPSTTISGNQRTRQQPRLRSASGADSIVFVALGPAARSASLLYALTSLREEGGWDGQVHVVVEREDDLACLSSYLRQSVTAIAIAPXXXXXXXGGSLH--SGGGDTRGVVQNAKMAKMKLLDLLPPSVERVVYVDCDVVTQRPLGPFLDAVAREWDELDRKAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--------------------XXXXXXXXXXXXXXXXXXXXXXXTVMIFADAGGHTVPVCRGCDRAHSGVVALARGHSERCLKLWHDAF---EGDGAGNGGTS------------TDQEALDAALGEGSGCEAIMMGRWHLSFMKDAFVMAGLTRTSTFGHYTGLLHPKTLGKVYRRFYEWALGMSFEEWGQGEIQGCA 406
[Close]
BLAST of mRNA_M-pyrifera_M_contig8413.19631.1 vs. uniprot
Match: F2U8W7_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U8W7_SALR5)

HSP 1 Score: 67.0 bits (162), Expect = 1.260e-8
Identity = 49/143 (34.27%), Postives = 71/143 (49.65%), Query Frame = 0 
Query:   32 PVGAVTGAAGTSTTWGARIRSAAGVDSIVFIALGPAARSTSLLYALSSLREEGRWDGPVHVIVEREGDLDCLSSHMRGGVTTIAVVPPDGGXXXXWDGDGDSDGVAINAKLIKMQLFDLLPASVQRVVYVDCDVITQQPLGPY 174
            P+G    AA  S T      S+  VD+ VFI +G    +T L  A+SSLR  G W+G V+VI +R+     L       V  I V             D  +  +AI++   K Q+FD+LPA V  V+Y+D D++  +PL P+
Sbjct:   55 PIGLSLTAADFSVT------SSEAVDAFVFICMGTWTNTTILHNAVSSLRTTGGWEGEVYVITDRQDGWPSLRDKYS--VNVIGV-------------DAVASKLAIHS--FKCQMFDVLPAHVHNVLYMDADIVVSRPLMPF 174
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8413.19631.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LSZ4_ECTSI6.000e-11451.93Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
F2U8W7_SALR51.260e-834.27Uncharacterized protein n=1 Tax=Salpingoeca rosett... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..35
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 9..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 36..434
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..8
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 28..35
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..21
score: 0.811
NoneNo IPR availableTMHMMTMhelixcoord: 7..26

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8413contigM-pyrifera_M_contig8413:10018..11484 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8413.19631.1mRNA_M-pyrifera_M_contig8413.19631.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig8413 10018..11484 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig8413.19631.1 ID=prot_M-pyrifera_M_contig8413.19631.1|Name=mRNA_M-pyrifera_M_contig8413.19631.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=435bp
MRVRWRWPCFSLALLLAYTVGSLLFLSPPPRPVGAVTGAAGTSTTWGARI
RSAAGVDSIVFIALGPAARSTSLLYALSSLREEGRWDGPVHVIVEREGDL
DCLSSHMRGGVTTIAVVPPDGGGGGGWDGDGDSDGVAINAKLIKMQLFDL
LPASVQRVVYVDCDVITQQPLGPYLAAVAREWGDVDEKAAAIMKAAVTVE
EAATAREVNKGLAVLPAESSSSLRKREGGAIEGPRLPPTSSPPSAAGEAP
GSPATAGTKGGTAAAAAAAAAAGMTSTLIIFPDAGGHKFPVCAGCDMAHS
GVVALARGHSERCLQLWHDAFVGKNGDGGGSGVGVRGGGGGDGTGTATDQ
EALDIALRKGSGCEARWVDRGHLHFMKDLFVMAGLTRTSTFAHFTGLLHP
ERLSFFYLRHYEWSLGRSVDEWGQGEVRACAAGW*
back to top