mRNA_M-pyrifera_M_contig109392.1962.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Match: A0A5A8DJ84_CAFRO (Uncharacterized protein n=3 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8DJ84_CAFRO) HSP 1 Score: 152 bits (384), Expect = 3.040e-43 Identity = 72/103 (69.90%), Postives = 84/103 (81.55%), Query Frame = 1
Query: 1 EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAEEKGKR--RYNGWVHATKTIAKEEGIGALWKGIIPRLARLAPGQAITWTVVTLVQTMFERRQM 303
EGDG Q +W+PFVTGLIA+TIGPL NCP+DVVKTR+MA + K +Y+GWV KTIA EEG+GALWKG+IPRLARLAPGQAITWTVV VQT +ER+ M
Sbjct: 215 EGDGVAQPLWQPFVTGLIASTIGPLFNCPLDVVKTRLMAQDTKRGEVPKYSGWVSTMKTIAAEEGVGALWKGLIPRLARLAPGQAITWTVVATVQTWYERKFM 317
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Match: A0A812Q505_9DINO (SFC1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812Q505_9DINO) HSP 1 Score: 142 bits (359), Expect = 1.690e-39 Identity = 66/104 (63.46%), Postives = 80/104 (76.92%), Query Frame = 1
Query: 1 EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAEEKGKR--RYNGWVHATKTIAKEEGIGALWKGIIPRLARLAPGQAITWTVVTLVQTMFERRQMG 306
+GDG+ Q++W PF+ GLIA+ GPL NCPMDVVKTR+MA +YNGW+HA K I KEEG+ ALWKGI PRLARLAPGQAITWTVVT VQT +E++ +
Sbjct: 210 DGDGQAQSLWVPFLNGLIASCFGPLANCPMDVVKTRLMAQSSAPGEVAKYNGWLHAMKVIYKEEGLAALWKGIGPRLARLAPGQAITWTVVTQVQTWYEQKYVA 313
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Match: A0A813BHQ0_9DINO (SFC1 protein n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813BHQ0_9DINO) HSP 1 Score: 130 bits (327), Expect = 2.950e-35 Identity = 59/89 (66.29%), Postives = 70/89 (78.65%), Query Frame = 1
Query: 1 EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAEEKGKR--RYNGWVHATKTIAKEEGIGALWKGIIPRLARLAPGQAITWT 261
EGD K Q +W+ F TGL+AA +GP+ NCPMDVVKTR+MA E K +Y G+VH KTIAKEEG+ ALWKG++PRL RLAPGQAITWT
Sbjct: 183 EGDKKVQPMWQTFATGLVAAAVGPMFNCPMDVVKTRLMAQETKANEQPKYRGFVHTVKTIAKEEGVRALWKGLVPRLMRLAPGQAITWT 271
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Match: A0A6G0XJP4_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XJP4_9STRA) HSP 1 Score: 127 bits (320), Expect = 8.540e-34 Identity = 58/101 (57.43%), Postives = 73/101 (72.28%), Query Frame = 1
Query: 1 EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAE--EKGKRRYNGWVHATKTIAKEEGIGALWKGIIPRLARLAPGQAITWTVVTLVQTMFERR 297
+GDGK +WK F+ GL+A ++GP NCPMDV+KTR+MA E + +Y G++HA IAKEEG ALWKG+IPRL R+APGQAITWTVV V FE +
Sbjct: 216 DGDGKQLEMWKTFINGLVAGSLGPCLNCPMDVIKTRLMAQETVQGVAPKYKGFIHAFNVIAKEEGHAALWKGLIPRLTRMAPGQAITWTVVMRVTAFFENQ 316
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Match: A0A024T7P3_9STRA (Uncharacterized protein n=6 Tax=Aphanomyces TaxID=100860 RepID=A0A024T7P3_9STRA) HSP 1 Score: 127 bits (318), Expect = 1.660e-33 Identity = 58/99 (58.59%), Postives = 72/99 (72.73%), Query Frame = 1
Query: 1 EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAEEKG--KRRYNGWVHATKTIAKEEGIGALWKGIIPRLARLAPGQAITWTVVTLVQTMFE 291
+GDGK +WK FV GL+A ++GP NCPMDV+KTR+MA E + +Y G++HA IAKEEG ALWKG++PRL R+APGQAITWTVV V FE
Sbjct: 215 DGDGKQLEMWKTFVNGLVAGSVGPCLNCPMDVIKTRLMAQETVVGVEPKYKGFIHAFNLIAKEEGHAALWKGLVPRLTRMAPGQAITWTVVMRVTAFFE 313
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Match: A0A7S3PR75_9STRA (Hypothetical protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PR75_9STRA) HSP 1 Score: 127 bits (319), Expect = 1.800e-33 Identity = 58/104 (55.77%), Postives = 74/104 (71.15%), Query Frame = 1
Query: 1 EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAEE-KGKR-RYNGWVHATKTIAKEEGIGALWKGIIPRLARLAPGQAITWTVVTLVQTMFERRQMG 306
+GDGK A+WK + G++A +GP NCP+DV+KTRMMA E G+ +Y W A K IAKEEG+ ALWKG+IPRL RLAPGQ ITWTVV V + FE++ +
Sbjct: 222 QGDGKQLAVWKTLLNGILAGAVGPCMNCPVDVIKTRMMAQEHIPGQEVKYKNWYQAAKLIAKEEGVPALWKGLIPRLTRLAPGQGITWTVVMRVTSFFEQQGLA 325
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Match: A0A067BSK2_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BSK2_SAPPC) HSP 1 Score: 122 bits (305), Expect = 2.560e-33 Identity = 57/99 (57.58%), Postives = 73/99 (73.74%), Query Frame = 1
Query: 1 EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAEE-KG-KRRYNGWVHATKTIAKEEGIGALWKGIIPRLARLAPGQAITWTVVTLVQTMFE 291
+GDGK +WK + GL+A ++GP N PMDV+KTR+MA E KG + +Y G+VHA IA+EEG ALWKG++PRL R+APGQAITWTVV V + FE
Sbjct: 53 DGDGKQLEVWKTLINGLVAGSLGPCLNSPMDVIKTRLMAQETVKGVEPKYRGFVHAFGVIAREEGNAALWKGLVPRLTRMAPGQAITWTVVMRVTSFFE 151
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Match: A0A485L8L5_9STRA (Aste57867_16413 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485L8L5_9STRA) HSP 1 Score: 126 bits (317), Expect = 2.920e-33 Identity = 60/101 (59.41%), Postives = 75/101 (74.26%), Query Frame = 1
Query: 1 EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAEE-KGKR-RYNGWVHATKTIAKEEGIGALWKGIIPRLARLAPGQAITWTVVTLVQTMFERR 297
+GDGK +WK FV GL+A ++GP NCPMDV+KTR+MA E KG+ +Y G+V A IAKEEG ALWKG++PRL R+APGQAITWTVV V + FE +
Sbjct: 226 DGDGKTLEVWKTFVNGLVAGSLGPCLNCPMDVIKTRLMAQETVKGQALKYTGFVQAFNLIAKEEGHAALWKGLLPRLTRMAPGQAITWTVVMRVTSFFENQ 326
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Match: A0A5D6YZX8_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YZX8_9STRA) HSP 1 Score: 125 bits (315), Expect = 9.490e-33 Identity = 61/106 (57.55%), Postives = 80/106 (75.47%), Query Frame = 1
Query: 1 EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAEE-KGKR-RYNGWVHATKTIAKEEGIGALWKGIIPRLARLAPGQAITWTVVTLVQTMFERRQMGEK 312
+GDGK + FV GLIA ++GP+ N PMDV+KTR+MA E KG+ +Y G+VHA + IAKEEG ALWKG++PRL R+APGQAITWTVV V ++FE +MG++
Sbjct: 242 DGDGKTLPSYVTFVNGLIAGSLGPMFNTPMDVLKTRLMAQETVKGQELKYKGFVHALRLIAKEEGPAALWKGLLPRLTRMAPGQAITWTVVMRVTSIFENAEMGDE 347
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Match: A0A2R5G1X8_9STRA (Mitochondrial succinate-fumarate transporter 1 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5G1X8_9STRA) HSP 1 Score: 124 bits (311), Expect = 4.800e-32 Identity = 58/102 (56.86%), Postives = 72/102 (70.59%), Query Frame = 1
Query: 1 EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAE--EKGKRRYNGWVHATKTIAKEEGIGALWKGIIPRLARLAPGQAITWTVVTLVQTMFERRQ 300
+GDGK A+W+ + GL+A +GP N P+DVVKTRMM + + G+ +Y GW + IA EEG+ ALWKGIIPRL+RLAPGQAITWTVV V T FE Q
Sbjct: 249 QGDGKVLAVWQTLLNGLLAGAVGPCLNAPIDVVKTRMMGQDFSKPGEIKYTGWYQTARLIAAEEGLPALWKGIIPRLSRLAPGQAITWTVVMRVSTYFENLQ 350 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109392.1962.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109392.1962.1 >prot_M-pyrifera_M_contig109392.1962.1 ID=prot_M-pyrifera_M_contig109392.1962.1|Name=mRNA_M-pyrifera_M_contig109392.1962.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=106bp EGDGKHQAIWKPFVTGLIAATIGPLCNCPMDVVKTRMMAAEEKGKRRYNGback to top mRNA from alignment at M-pyrifera_M_contig109392:285..602- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109392.1962.1 ID=mRNA_M-pyrifera_M_contig109392.1962.1|Name=mRNA_M-pyrifera_M_contig109392.1962.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=318bp|location=Sequence derived from alignment at M-pyrifera_M_contig109392:285..602- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109392:285..602- >mRNA_M-pyrifera_M_contig109392.1962.1 ID=mRNA_M-pyrifera_M_contig109392.1962.1|Name=mRNA_M-pyrifera_M_contig109392.1962.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=636bp|location=Sequence derived from alignment at M-pyrifera_M_contig109392:285..602- (Macrocystis pyrifera P11B4 male)back to top |