prot_M-pyrifera_M_contig10939.1960.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig10939.1960.1
Unique Nameprot_M-pyrifera_M_contig10939.1960.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length152
Homology
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Match: A0A6H5KGH1_9PHAE (SSD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KGH1_9PHAE)

HSP 1 Score: 217 bits (553), Expect = 3.370e-63
Identity = 118/149 (79.19%), Postives = 127/149 (85.23%), Query Frame = 0
Query:    1 MECFVEAARSLSDEFGSAISGDISLISGSYLIILIYTVINLSGRPLLKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFVICNAFGRTDPRKSIPDRMAEGLGTSGEELLYK--TYFFFFLIITFTFQP 147
            +EC+VEA RSLSDEFG AISGDISLISGSY+II+ YTV NLS  P LKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPF+LLGLGVDDSFVICNAFGRTDPRKSIP+RM EGLGTSG  +     T F  F+I + T  P
Sbjct:  254 LECYVEATRSLSDEFGGAISGDISLISGSYMIIMAYTVFNLSSTPFLKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFILLGLGVDDSFVICNAFGRTDPRKSIPERMREGLGTSGVSITVTSITDFVAFMISSTTALP 402          
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Match: A0A7R9U228_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U228_9STRA)

HSP 1 Score: 130 bits (328), Expect = 2.380e-35
Identity = 75/130 (57.69%), Postives = 91/130 (70.00%), Query Frame = 0
Query:    1 MECFVEAARSLSDEFGSAISGDISLISGSYLIILIYTVINLSGRPLLKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFVICNAFGRTDPRKS----IPDRMAEGLGTSG 126
            + C+ EA RSLSDEFG AI+GDI LIS  Y+IILIY  INL     +K R  LSLG ++TVG+S+  SIGLA+  G FY P+++VLPFVLLGLGVDDSFVI N+F +T P        P R+A  LG SG
Sbjct:   54 LRCYPEAQRSLSDEFGEAITGDIGLISLGYVIILIYMAINLGAFTPVKMRFSLSLGCLVTVGMSVGTSIGLASAFGQFYGPVNSVLPFVLLGLGVDDSFVIANSFDQTPPLPGEAFDAPTRVARALGHSG 183          
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Match: A0A7S1XPY4_9STRA (Hypothetical protein n=3 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XPY4_9STRA)

HSP 1 Score: 125 bits (314), Expect = 1.790e-30
Identity = 76/153 (49.67%), Postives = 97/153 (63.40%), Query Frame = 0
Query:    1 MECFVEAARSLSDEFGSAISGDISLISGSYLIILIYTVINLSGRPLLKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFVICNAFGRTDP----RKSIPDRMAEGLGTSGEELLYK--TYFFFFLIITFTFQP 147
            +EC+ +A RS SDEFGSAI GD++L++  Y IIL Y  INL     +K R+ LS G ++ VG+S+  SIGL++  G FY P++TVLPFVLLGLGVDD+FVI N+  +T P    R   P RMA  LG SG  +     T F  F I T T  P
Sbjct:  281 IECYPQATRSFSDEFGSAIQGDVALMTAGYFIILGYLAINLGEYTRVKMRLALSAGCLVAVGMSVGTSIGLSSAFGQFYGPVNTVLPFVLLGLGVDDAFVIVNSLDQTPPLPGERLEAPTRMARALGHSGVSISVTSLTDFVAFAISTSTVLP 433          
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Match: A0A813M0I9_POLGL (Hypothetical protein n=1 Tax=Polarella glacialis TaxID=89957 RepID=A0A813M0I9_POLGL)

HSP 1 Score: 113 bits (283), Expect = 2.870e-26
Identity = 62/130 (47.69%), Postives = 89/130 (68.46%), Query Frame = 0
Query:    2 ECFVEAARSLSDEFGSAISGDISLISGSYLIILIYTVINLSGR-PLLKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFVICNAFGRTDPRKSIPDRMAEGLGTSGEELL 130
            + F  A RS  D FG+ I GD+ LI+G++ II+I+ V+NL G    ++SR LL+LG++L++ L+ A   GLA Y  F YTP+ +VLPFVLLG+GVDDSFVI NA  R D    IP+R+A+ +  +G  ++
Sbjct: 3019 KAFAFATRSRGDAFGNVIQGDVGLINGAFAIIIIFMVLNLGGLCHKIRSRALLALGSVLSIVLAGAAGYGLAMYCQFIYTPVMSVLPFVLLGIGVDDSFVIMNALDRVDKNLPIPERIAKAIAHAGASVM 3148          
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Match: A0A813INV5_POLGL (Hypothetical protein n=3 Tax=Polarella glacialis TaxID=89957 RepID=A0A813INV5_POLGL)

HSP 1 Score: 113 bits (282), Expect = 3.610e-26
Identity = 62/130 (47.69%), Postives = 89/130 (68.46%), Query Frame = 0
Query:    2 ECFVEAARSLSDEFGSAISGDISLISGSYLIILIYTVINLSGR-PLLKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFVICNAFGRTDPRKSIPDRMAEGLGTSGEELL 130
            + F  A RS  D FG+ I GD+ LI+G++ II+I+ V+NL G    ++SR LL+LG++L++ L+ A   GLA Y  F YTP+ +VLPFVLLG+GVDDSFVI NA  R D    IP+R+A+ +  +G  ++
Sbjct:  265 KAFAFATRSRGDAFGNVIRGDVGLINGAFAIIIIFMVLNLGGLCHKIRSRALLALGSVLSIVLAGAAGYGLAMYCQFIYTPVMSVLPFVLLGIGVDDSFVIMNALDRVDKNLPIPERIAKAIAHAGASVM 394          
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Match: A0A7S2SME8_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SME8_9STRA)

HSP 1 Score: 108 bits (271), Expect = 1.050e-24
Identity = 60/129 (46.51%), Postives = 87/129 (67.44%), Query Frame = 0
Query:    7 AARSLSDEFGSAISGDISLISGSYLIILIYTVINLSGRPL------LKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFVICNAFGRTDPRKSIPDRMAEGLGTSGEEL 129
            A RS +DEFG AI GDI L++ +++I+++Y  + L   P         SRILLSL +IL +GL++  + GL +Y+G+ ++P+H VLPFV+LGLGVDDSFVI N+F  T   + IP+RMA  LG +   +
Sbjct:   81 ADRSWADEFGDAIGGDILLVNVAFVIMMVYLSLFLGEIPCSCKYPNTGSRILLSLASILAIGLAMLSAFGLCSYMGYIWSPVHGVLPFVILGLGVDDSFVIANSFDHTPRNRPIPERMALALGHAASSI 209          
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Match: K8EQV0_9CHLO (RND family transporter: Niemann-Pick type C1 disease protein-like protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EQV0_9CHLO)

HSP 1 Score: 107 bits (268), Expect = 2.780e-24
Identity = 63/148 (42.57%), Postives = 95/148 (64.19%), Query Frame = 0
Query:    9 RSLSDEFGSAISGDISLISGSYLIILIYTVINLS--GRPLLKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFVICNAFGRTDPRKSIPDRMAEGLGTSGEELLYKTY--FFFFLIITFTFQPTRRRF 152
            RS  DEFG+AI+GDI+ +  ++++IL Y  + LS  G   + SR+ +S   ++++GL+IA S GL +Y G FY+PL  VLPF+LLG+GVDD FV+ NA+  T+P  SI +R+   + T+G  +   ++   F FLI + T  P  R F
Sbjct:  363 RSFGDEFGAAITGDITKLQIAFILILGYATLMLSKGGEGCVGSRVFVSGMGVVSIGLAIASSYGLCSYFGLFYSPLMNVLPFLLLGIGVDDMFVLVNAYDNTNPYLSIAERLGNAMSTAGMSITVTSFTDIFAFLIGSTTSLPALRNF 510          
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Match: A0A061RV36_9CHLO (Niemann-Pick C1 protein n=3 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061RV36_9CHLO)

HSP 1 Score: 105 bits (262), Expect = 1.780e-23
Identity = 63/149 (42.28%), Postives = 90/149 (60.40%), Query Frame = 0
Query:    8 ARSLSDEFGSAISGDISLISGSYLIILIYTVINLS--GRPLLKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFVICNAFGRTDPRKSIPDRMAEGLGTSGEELLYK--TYFFFFLIITFTFQPTRRRF 152
            ARSLSDEFG+ + GD  L+S + +++L Y V+ LS         R+LL +G  L++G+SIA + G+++ +G FY+PL  +LPF+LLG+GVDD FVI NAF  +     IP R+   L T+G  +     T    F I +FT  P  R F
Sbjct:  277 ARSLSDEFGAELDGDTQLLSAALMLVLFYAVVMLSRWSEGWKGIRLLLCIGGTLSIGMSIACTFGISSAIGLFYSPLTGILPFLLLGIGVDDMFVIVNAFDNSPEDLEIPKRIGHALATAGSSITVTSLTDILAFFIGSFTSLPALRNF 425          
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Match: A0A7S2G6F6_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G6F6_9STRA)

HSP 1 Score: 102 bits (255), Expect = 1.540e-22
Identity = 60/128 (46.88%), Postives = 83/128 (64.84%), Query Frame = 0
Query:    1 MECFVEAARSLSDEFGSAISGDISLISGSYLIILIYTVINLSGRPLL------KSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFVICNAFGRTDPRKSIPDRMAEGL 122
            ++ +  A+RS  D F  AI GDI L++ +Y I++IY  +NL   P L       SR+LL++ ++L + LS+  + GL A +GF ++P H VLPFVLLGLGVDDSFVI +AF  T+PR  IP RM   L
Sbjct:  200 LKYYAMASRSWGDVFSDAIGGDIVLMNIAYYIMIIYLSMNLGRLPCLPGCPNYNSRVLLAISSVLAILLSMGAAFGLCAMMGFIWSPQHGVLPFVLLGLGVDDSFVIVSAFDHTNPRDPIPLRMRNTL 327          
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Match: UPI001458C1C9 (protein patched homolog 1-like n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001458C1C9)

HSP 1 Score: 102 bits (254), Expect = 2.130e-22
Identity = 59/119 (49.58%), Postives = 80/119 (67.23%), Query Frame = 0
Query:    2 ECFVEAARSLSDEFGSAISGDISLISGSYLIILIYTVINLSGRPLLKSRILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFVICNAFGRTDPRKSIPDRMAE 120
            E ++ A RS SD  G AISGD+SL+S  Y+I+++Y VI L     L   + +S+  IL +GLS+ FS GLA+  G+ YTPLH+VLPF+LLG+GVDD FVI  A+      KS+PD  +E
Sbjct:  262 EYYILATRSFSDVAGDAISGDVSLLSAGYMIVIVYVVIILGRFNCLDFGLGISVCGILVIGLSLGFSYGLASAAGWNYTPLHSVLPFLLLGIGVDDLFVIMGAY------KSLPDGYSE 374          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig10939.1960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KGH1_9PHAE3.370e-6379.19SSD domain-containing protein n=2 Tax=Ectocarpus T... [more]
A0A7R9U228_9STRA2.380e-3557.69Hypothetical protein (Fragment) n=1 Tax=Pinguiococ... [more]
A0A7S1XPY4_9STRA1.790e-3049.67Hypothetical protein n=3 Tax=Phaeomonas parva TaxI... [more]
A0A813M0I9_POLGL2.870e-2647.69Hypothetical protein n=1 Tax=Polarella glacialis T... [more]
A0A813INV5_POLGL3.610e-2647.69Hypothetical protein n=3 Tax=Polarella glacialis T... [more]
A0A7S2SME8_9STRA1.050e-2446.51Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
K8EQV0_9CHLO2.780e-2442.57RND family transporter: Niemann-Pick type C1 disea... [more]
A0A061RV36_9CHLO1.780e-2342.28Niemann-Pick C1 protein n=3 Tax=Tetraselmis sp. GS... [more]
A0A7S2G6F6_9STRA1.540e-2246.88Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
UPI001458C1C92.130e-2249.58protein patched homolog 1-like n=1 Tax=Pecten maxi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000731Sterol-sensing domainPFAMPF12349Sterol-sensingcoord: 47..144
e-value: 5.0E-21
score: 75.1
IPR000731Sterol-sensing domainPROSITEPS50156SSDcoord: 22..152
score: 21.115
NoneNo IPR availablePANTHERPTHR10796:SF130coord: 4..113
NoneNo IPR availablePANTHERPTHR10796PATCHED-RELATEDcoord: 4..113
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 109..128
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 147..152
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 85..108
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..17
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 18..39
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 80..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 40..50
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 129..146
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 51..79
NoneNo IPR availableSUPERFAMILY82866Multidrug efflux transporter AcrB transmembrane domaincoord: 11..130
NoneNo IPR availableTMHMMTMhelixcoord: 18..40
NoneNo IPR availableTMHMMTMhelixcoord: 52..74
NoneNo IPR availableTMHMMTMhelixcoord: 84..106

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig10939contigM-pyrifera_M_contig10939:16..5225 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig10939.1960.1mRNA_M-pyrifera_M_contig10939.1960.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig10939 16..5237 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig10939.1960.1 ID=prot_M-pyrifera_M_contig10939.1960.1|Name=mRNA_M-pyrifera_M_contig10939.1960.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp
MECFVEAARSLSDEFGSAISGDISLISGSYLIILIYTVINLSGRPLLKSR
ILLSLGAILTVGLSIAFSIGLAAYLGFFYTPLHTVLPFVLLGLGVDDSFV
ICNAFGRTDPRKSIPDRMAEGLGTSGEELLYKTYFFFFLIITFTFQPTRR
RF
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR000731SSD