mRNA_M-pyrifera_M_contig84008.19601.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Match: R1DAR8_EMIHU (Thioredoxin n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1DAR8_EMIHU) HSP 1 Score: 81.6 bits (200), Expect = 5.380e-18 Identity = 40/82 (48.78%), Postives = 51/82 (62.20%), Query Frame = 1 Query: 67 VTVIKFTAAWCGPCRAIAPAVHRMAQEMRNVQFVSIDGDLPAMRQTLSALGIRAFPTFLLYVDGRQIGQVRGADERKLRAAI 312 + V+ FTA+WCGPCR IAP +AQEM V FV +D D + G+RA PTF Y G ++G+V GA+E LRAAI Sbjct: 8 LVVVDFTASWCGPCRRIAPVFASLAQEMPEVDFVKVDVD--EAQDVAQMCGVRAMPTFQFYRRGSKLGEVSGANEAALRAAI 87
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Match: A0A1R1XXR6_9FUNG (Thioredoxin n=3 Tax=Smittium culicis TaxID=133412 RepID=A0A1R1XXR6_9FUNG) HSP 1 Score: 81.6 bits (200), Expect = 7.430e-18 Identity = 43/104 (41.35%), Postives = 61/104 (58.65%), Query Frame = 1 Query: 1 VCDLRQPKEFMQAIETGKQEGCVTVIKFTAAWCGPCRAIAPAVHRMAQEMRNVQFVSIDGDLPAMRQTLSALGIRAFPTFLLYVDGRQIGQVRGADERKLRAAI 312 V +L+ +EF AI +TV+ F A WCGPCRAI+PA+ + A+E V+FV +D D + Q +GI A PT LY DG+ + +V GA+ +RA I Sbjct: 3 VVELKSTQEFNDAISAST----LTVVDFHAVWCGPCRAISPAILKFAEEFPAVKFVKVDVD--ELSQVAEQVGITAMPTIKLYRDGKVVAEVVGANINAIRAKI 100
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Match: A0A161TBW3_XYLHT (Thioredoxin n=1 Tax=Xylona heveae (strain CBS 132557 / TC161) TaxID=1328760 RepID=A0A161TBW3_XYLHT) HSP 1 Score: 80.1 bits (196), Expect = 3.240e-17 Identity = 42/102 (41.18%), Postives = 63/102 (61.76%), Query Frame = 1 Query: 7 DLRQPKEFMQAIETGKQEGCVTVIKFTAAWCGPCRAIAPAVHRMAQEMRNVQFVSIDGDLPAMRQTLSALGIRAFPTFLLYVDGRQIGQVRGADERKLRAAI 312 +L EF A+E + V+ A WCGPC+ IAP V ++++E NV+F ID D + + L IRA PTF+L+ +G+++G+V GA+E+ LRAAI Sbjct: 7 NLNNKSEFNTALEAPDT---LIVLDCFATWCGPCKVIAPKVVKLSEEFPNVKFYKIDVD--EVSDVAADLSIRAMPTFILFKNGQRVGEVVGANEKALRAAI 103
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Match: A0A8H7APW8_9EURO (Thioredoxin n=1 Tax=Endocarpon pusillum TaxID=364733 RepID=A0A8H7APW8_9EURO) HSP 1 Score: 77.8 bits (190), Expect = 2.540e-16 Identity = 37/82 (45.12%), Postives = 55/82 (67.07%), Query Frame = 1 Query: 67 VTVIKFTAAWCGPCRAIAPAVHRMAQEMRNVQFVSIDGDLPAMRQTLSALGIRAFPTFLLYVDGRQIGQVRGADERKLRAAI 312 + V+ A WCGPC+ IAP V ++A+E ++ +F ID D + LGIRA PTFLL+ +G ++G+V GA+E+ L+AAI Sbjct: 23 LVVLDCFATWCGPCKVIAPKVVQLAKEFQDARFYKIDVD--EVSDVAQELGIRAMPTFLLFKNGEKVGEVVGANEKALKAAI 102
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Match: A0A6P8S151_GEOSA (Thioredoxin n=1 Tax=Geotrypetes seraphini TaxID=260995 RepID=A0A6P8S151_GEOSA) HSP 1 Score: 76.6 bits (187), Expect = 7.220e-16 Identity = 35/104 (33.65%), Postives = 64/104 (61.54%), Query Frame = 1 Query: 1 VCDLRQPKEFMQAIETGKQEGCVTVIKFTAAWCGPCRAIAPAVHRMAQEMRNVQFVSIDGDLPAMRQTLSALGIRAFPTFLLYVDGRQIGQVRGADERKLRAAI 312 V +++ EF Q ++ ++ + ++ FTAAWCGPC+ IAP + ++ ++ F+ +D D + S+ GIRA PTF+ Y G+++ +V+GAD+ +L+ I Sbjct: 2 VKEIQSKDEFDQILKDQSEK--LIIVDFTAAWCGPCKLIAPYFDHLCEKYPDILFLKVDVD--EVDDLASSCGIRAMPTFVFYKKGKKVAEVKGADKEQLKTKI 101
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Match: A0A813T761_9BILA (Thioredoxin n=1 Tax=Brachionus calyciflorus TaxID=104777 RepID=A0A813T761_9BILA) HSP 1 Score: 76.3 bits (186), Expect = 1.020e-15 Identity = 36/104 (34.62%), Postives = 62/104 (59.62%), Query Frame = 1 Query: 1 VCDLRQPKEFMQAIETGKQEGCVTVIKFTAAWCGPCRAIAPAVHRMAQEMRNVQFVSIDGDLPAMRQTLSALGIRAFPTFLLYVDGRQIGQVRGADERKLRAAI 312 V +++ +EF Q +++GK +++ FTA WCGPC+ I P R++ E VQF+ +D D + G+RA PTF++YV+G ++ ++ GA + KL + Sbjct: 5 VIEVKSAEEFQQ-LKSGK----TSIVDFTATWCGPCQNIKPEFERLSNEYPTVQFLKVDVD--ELSDVAGDAGVRAMPTFMVYVNGEKVDELVGASKDKLNEIV 101
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Match: A0A7S3AFB6_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AFB6_9EUKA) HSP 1 Score: 79.7 bits (195), Expect = 4.640e-15 Identity = 36/93 (38.71%), Postives = 56/93 (60.22%), Query Frame = 1 Query: 25 EFMQAIETGKQEGCVTVIKFTAAWCGPCRAIAPAVHRMAQEMRNVQFVSIDGDLPAMRQTLSALGIRAFPTFLLYVDGRQIGQVRGADERKLR 303 E+ + + G + ++ F A WCGPC+ IAPA+ ++A+E V F +D D ++ A GI+A PTF Y+D +++G VRGADE +R Sbjct: 12 EYERLLSQAASSGRMVLVDFFAEWCGPCKMIAPAIEKLAKEYPQVIFAKVDVD--QLQDVAQAAGIQAMPTFKTYLDTKEVGSVRGADEDAIR 102
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Match: A0A177T472_9BASI (Thioredoxin n=2 Tax=Tilletia TaxID=13289 RepID=A0A177T472_9BASI) HSP 1 Score: 73.9 bits (180), Expect = 8.650e-15 Identity = 45/110 (40.91%), Postives = 60/110 (54.55%), Query Frame = 1 Query: 1 VCDLRQPKEFMQAIETGKQEGCVTVIKFTAAWCGPCRAIAPAVHRMAQEM-RNVQFVSIDGDLPAMRQTLSALGIRAFPTFLLYVDGRQIGQVRGADERKLRAAIGVAQE 327 V L EF AI+ K V +I F A WCGPCR I+P ++A++ V+F +D D A LGI+A PTFLL+V+G + G+V GA KL+ I A E Sbjct: 3 VTPLGSLSEFQSAIKDNK----VVLIDFWAEWCGPCRMISPIFEKLAEQHGEKVKFFKVDVD--AAPDVSQELGIKAMPTFLLFVNGEKAGEVVGAVPAKLQTLISQAVE 106
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Match: A0A507CIZ3_9FUNG (Thioredoxin domain-containing protein n=1 Tax=Synchytrium endobioticum TaxID=286115 RepID=A0A507CIZ3_9FUNG) HSP 1 Score: 75.1 bits (183), Expect = 1.300e-14 Identity = 34/81 (41.98%), Postives = 52/81 (64.20%), Query Frame = 1 Query: 58 EGCVTVIKFTAAWCGPCRAIAPAVHRMAQEMRNVQFVSIDGDLPAMRQTLSALGIRAFPTFLLYVDGRQIGQVRGADERKL 300 E +TV KFTA WCGPC+A+AP +A + NV F+ +D D + ++ GIRA PTF+ + +G+++ +V GAD K+ Sbjct: 18 ESKLTVTKFTAVWCGPCKAVAPRFEALANQTTNVNFLEVDVD--QQKDVAASSGIRAMPTFVFHKNGKKLAEVVGADIAKV 96
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Match: UPI001D0370C6 (thioredoxin domain-containing protein n=1 Tax=Hirsutella rhossiliensis TaxID=111463 RepID=UPI001D0370C6) HSP 1 Score: 75.1 bits (183), Expect = 1.700e-14 Identity = 38/83 (45.78%), Postives = 52/83 (62.65%), Query Frame = 1 Query: 73 VIKFTAAWCGPCRAIAPAVHRMAQEMR---NVQFVSIDGDLPAMRQTLSALGIRAFPTFLLYVDGRQIGQVRGADERKLRAAI 312 V+ A WCGPC+AIAP + M++E++ V FV D D + Q LG+RA PTF+++ DG G+V GAD RKL AA+ Sbjct: 96 VVDCFATWCGPCKAIAPVLETMSEELQFRDKVHFVKFDVD--RLPQVTQELGVRAMPTFVMFKDGVTAGEVVGADPRKLAAAL 176 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig84008.19601.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig84008.19601.1 >prot_M-pyrifera_M_contig84008.19601.1 ID=prot_M-pyrifera_M_contig84008.19601.1|Name=mRNA_M-pyrifera_M_contig84008.19601.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp MQAIETGKQEGCVTVIKFTAAWCGPCRAIAPAVHRMAQEMRNVQFVSIDGback to top mRNA from alignment at M-pyrifera_M_contig84008:103..447+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig84008.19601.1 ID=mRNA_M-pyrifera_M_contig84008.19601.1|Name=mRNA_M-pyrifera_M_contig84008.19601.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=345bp|location=Sequence derived from alignment at M-pyrifera_M_contig84008:103..447+ (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig84008:103..447+ >mRNA_M-pyrifera_M_contig84008.19601.1 ID=mRNA_M-pyrifera_M_contig84008.19601.1|Name=mRNA_M-pyrifera_M_contig84008.19601.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=630bp|location=Sequence derived from alignment at M-pyrifera_M_contig84008:103..447+ (Macrocystis pyrifera P11B4 male)back to top |