mRNA_M-pyrifera_M_contig83925.19589.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83925.19589.1
Unique NamemRNA_M-pyrifera_M_contig83925.19589.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Match: A0A356VEX8_9GAMM (HDOD domain-containing protein n=7 Tax=Halieaceae TaxID=1706372 RepID=A0A356VEX8_9GAMM)

HSP 1 Score: 501 bits (1290), Expect = 1.770e-176
Identity = 275/296 (92.91%), Postives = 284/296 (95.95%), Query Frame = 1
Query:    1 PAARDMQPAAKPHAPLRVRTALQSFGANAESLDVAPEDAAPPASGPPAALQSFTLMRLDSARNAEEPGVFRTLVEAIPEPHAMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDINLLSLQPELAP-HAPGCLLLERVQAQQAALGANAAMFAALLARRWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL 885
            PA  D QPAAKP  PLRVRTA+QSFGAN ESLDVAPE AAPPASGPPAALQSFTLMR DSAR+A+EPGVFRTLVEA+PEPH MFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDINLLSL+PELA  +APGCLLLERV+ QQAALGANAAMF+ALLA+RWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL
Sbjct:   27 PAGPDTQPAAKPDGPLRVRTAIQSFGANTESLDVAPEGAAPPASGPPAALQSFTLMRRDSARDADEPGVFRTLVEALPEPHTMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDINLLSLRPELAALYAPGCLLLERVKGQQAALGANAAMFSALLAQRWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL 322          
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Match: A0A2E7C0S4_9GAMM (Histidine kinase n=1 Tax=Haliea sp. TaxID=1932666 RepID=A0A2E7C0S4_9GAMM)

HSP 1 Score: 350 bits (897), Expect = 8.680e-117
Identity = 203/280 (72.50%), Postives = 224/280 (80.00%), Query Frame = 1
Query:   49 RVRTALQSFGANAESLDVAPEDAAPPASGPPAALQSFTLMRLDSARNAEEPGVFRTLVEAIPEPHAMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDINLLSLQPELAP-HAPGCLLLERVQAQQAALGANAAMFAALLARRWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL 885
            RVRTA+QSF ANA+  +   E AA  +   P ALQSF L+R D+A +A  P     L +A+PEPHAMFLQVT ELDDIDEIT AVK EPALAADVLRTVNSAAF LTTPI+SVHHAIAYLGVSYVKGLIAQ+ALARTLPA+APGS QE AM RLWKSSQ+ASA+AFLLARNL ++NPSV STQALLANLGDINL+SL+PELA  +AP   LLERVQ QQA LGAN AM AALLA RWGLP  I A L+QSLLPLAV P EHPL G  LA A VVY A R+
Sbjct:   43 RVRTAIQSFSANADPTEAEAETAADASPVLPTALQSFVLLRTDTA-DAPTPQSLLELADALPEPHAMFLQVTRELDDIDEITAAVKQEPALAADVLRTVNSAAFGLTTPISSVHHAIAYLGVSYVKGLIAQTALARTLPATAPGSAQETAMHRLWKSSQIASASAFLLARNLGMENPSVTSTQALLANLGDINLVSLRPELAYLYAPEISLLERVQGQQAELGANGAMLAALLAERWGLPGTIRATLEQSLLPLAVHPREHPLYGGDLAAATVVYLAGRI 321          
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Match: A0A4R2KX73_9GAMM (HDOD domain-containing protein n=1 Tax=Chromatocurvus halotolerans TaxID=1132028 RepID=A0A4R2KX73_9GAMM)

HSP 1 Score: 176 bits (447), Expect = 2.400e-49
Identity = 113/250 (45.20%), Postives = 157/250 (62.80%), Query Frame = 1
Query:  139 PAALQSFTLMRLDSARNAEEPGVFRTLVEAIPEPHAMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDINLLSLQPELAP-HAPGCLLLERVQAQQAALGANAAMFAALLARRWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL 885
            P  L  F L+  D     E   V   +V  + +P  +  +VT  LDD D + EAVK+ PAL AD+LRTVNSAAFAL+ PI+S+ HAI YLG S VKGL+ QS + R +      S+Q+A MR LW+SS VAS TA +L ++L + +PS+ ST++LLANLGD+ LLS + ++A  +A    L  R +AQQ  L ANAA+ + +L  +WGLP  +   L    +P+A+PPA+HP     LA+A + Y A R+
Sbjct:   54 PNELADFFLVMEDHLTEVEREDVAE-IVARLRQPPPILERVTKGLDDPDALAEAVKSNPALTADILRTVNSAAFALSAPISSIQHAITYLGTSLVKGLVLQSTVNRVMEFE-HASQQDAYMR-LWRSSYVASTTALMLGQHLGVAHPSILSTRSLLANLGDLALLSARADMAGLYARKATLFSRAKAQQDELMANAAVISGMLVEQWGLPEALIRGLQHGYIPMALPPAQHPDIDGDLASAVLCYVAERI 300          
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Match: B8KEU2_9GAMM (Putative signal transduction protein n=1 Tax=gamma proteobacterium NOR5-3 TaxID=566466 RepID=B8KEU2_9GAMM)

HSP 1 Score: 173 bits (438), Expect = 7.760e-48
Identity = 108/250 (43.20%), Postives = 157/250 (62.80%), Query Frame = 1
Query:  139 PAALQSFTLMRLDSARNAEEPGVFRTLVEAIPEPHAMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDINL-LSLQPELAPHAPGCLLLERVQAQQAALGANAAMFAALLARRWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL 885
            P  L+ F L+      +A    + +++   +PEPH +  Q+   LD  D++ EAV ++  L A +LRTVNSAAF+L +PI SV HAI YLGVS VKGL+AQ+A+A  +    P   Q+AA+ R+WKS+  ASA A +L + L ++ PSV +T+AL  NLGD+ L +S++   A +  G  ++ERV AQQ A  ANAA+  ++LA  W LP +I  A++  LLPL    A+HP+QG A  +  +VY A R+
Sbjct:   72 PDELRGFHLIMQSEMDDAARERI-KSICTNMPEPHPVQRQLANGLDTPDDLMEAVASDAGLTASILRTVNSAAFSLASPITSVQHAITYLGVSVVKGLVAQAAVAEQVDDVTPS--QQAALSRIWKSACTASALAQMLGQELGVERPSVLATKALFFNLGDVALAMSIEESAAWYKDGVSIVERVAAQQQACSANAAIVGSMLADLWHLPQDIVDAIESGLLPLVTTAADHPMQGDARRDNVLVYLAGRI 318          
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Match: A4ACS8_9GAMM (HDOD domain protein n=1 Tax=Congregibacter litoralis KT71 TaxID=314285 RepID=A4ACS8_9GAMM)

HSP 1 Score: 172 bits (437), Expect = 1.090e-47
Identity = 108/250 (43.20%), Postives = 154/250 (61.60%), Query Frame = 1
Query:  139 PAALQSFTLMRLDSARNAEEPGVFRTLVEAIPEPHAMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDINLL-SLQPELAPHAPGCLLLERVQAQQAALGANAAMFAALLARRWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL 885
            PA L+ F L+  D     E       +   +PEPH +  ++   LD  D + EAV ++  L A +LRTVNSAAF+L +PI SV HAI YLGVS VKGL+AQ+A+A  L   +P  EQ+AA+ R+WKS+  ASA A +L + L ++ PSV +T+AL  NLGD+ L+ S++   A ++ G  +++RV AQQ A  AN A+  A LAR W LP +I  A++   +PL  P +EHP+ GA      ++Y A R+
Sbjct:   72 PAELEGFHLVMRDEL-TPEVSANIDAICTRMPEPHPVQRKLASGLDTPDALMEAVASDAGLTASILRTVNSAAFSLASPITSVQHAITYLGVSVVKGLVAQAAVAEQLDEGSP--EQQAALGRIWKSACTASAMAQMLGQELGVERPSVLATKALFFNLGDVALVTSVEGLPAVYSDGVSIVDRVSAQQKACSANTAIVGAGLARHWHLPDDIANAIESGFIPLVTPASEHPMSGAERQENVLLYLAGRI 318          
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Match: A4ABI9_9GAMM (HDOD domain protein n=1 Tax=Congregibacter litoralis KT71 TaxID=314285 RepID=A4ABI9_9GAMM)

HSP 1 Score: 167 bits (423), Expect = 8.360e-46
Identity = 108/251 (43.03%), Postives = 158/251 (62.95%), Query Frame = 1
Query:  136 PPAALQSFTLMRLDSARNAEEPGVFRTLVEAIPEPHAMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDINLLSLQPELAP-HAPGCLLLERVQAQQAALGANAAMFAALLARRWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL 885
            PP AL    L+ ++   N  E    R LV  + +P  +  +++  LDD +E+ EA+ + P L+ADVLR VNSAAFAL +PI+S+ HA+AYLG + V+GL+ QSA+ + +        Q+AA  R+W+SS VASA A   AR LN+++PSV +T+ALL N+GD+ L+S +PEL+  +AP   LL RV+AQQ  + AN+A+ ++LL R+W LP ++  +L  SL PL   P  +           VVY ACR+
Sbjct:   53 PPDALADLFLV-MEEHLNELELEDIRALVATLRQPPPLVERLSSGLDDPEELREAILSSPTLSADVLRVVNSAAFALNSPISSIEHAVAYLGTTMVRGLVLQSAVGQVMAFETD--VQKAAYMRIWRSSYVASAAAQAYARALNVEHPSVHATRALLVNIGDLALISARPELSVIYAPKTDLLGRVEAQQEEIMANSAVLSSLLVRQWSLPDDLCDSLRHSLTPLTWAPEGNERSADKQREDLVVYLACRI 300          
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Match: A0A4R2KRS5_9GAMM (HD-like signal output (HDOD) protein n=1 Tax=Chromatocurvus halotolerans TaxID=1132028 RepID=A0A4R2KRS5_9GAMM)

HSP 1 Score: 164 bits (414), Expect = 3.010e-44
Identity = 95/220 (43.18%), Postives = 139/220 (63.18%), Query Frame = 1
Query:  229 IPEPHAMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDINLLSLQPELAP-HAPGCLLLERVQAQQAALGANAAMFAALLARRWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL 885
            +P+PH +  Q+   LD  +E+ E V ++  L A +LR VNSAAF+L +PI S+ HAI YLG+S VKGL+AQ+A+A+ + +  P  EQ+AA+ R+W S   ASA   LLA+ L L  PSV +T+AL  NLGD+ L+ ++P     +APG  ++ER+ +QQ  +G N AM  A LA+RW LP +I  A+     PL     E+P+Q  A  +  ++Y A R+
Sbjct:  106 MPDPHPIHRQLASGLDSPEELAEIVASDAGLTASLLRNVNSAAFSLASPIISIRHAITYLGMSTVKGLVAQAAVAQQVESLTP--EQQAALTRIWTSGCAASAVTQLLAQELGLTRPSVLATRALFLNLGDVALVMVRPSSVEWYAPGSNIVERICSQQNTIGMNTAMVGARLAQRWNLPDDISKAIQDGFTPLVTASEEYPMQEEARQDNVILYLAARI 323          
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Match: B8KKJ3_9GAMM (Putative signal transduction protein n=1 Tax=gamma proteobacterium NOR5-3 TaxID=566466 RepID=B8KKJ3_9GAMM)

HSP 1 Score: 163 bits (412), Expect = 3.280e-44
Identity = 98/226 (43.36%), Postives = 150/226 (66.37%), Query Frame = 1
Query:  211 RTLVEAIPEPHAMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDINLLSLQPELAP-HAPGCLLLERVQAQQAALGANAAMFAALLARRWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL 885
            + LV A+ +P  +  ++TG LDD +E+ EA+ + P L+ADVLR VNSAAFAL +PI+S+ HA+AYLG + V+GL+ QS + + +        Q+AA  R+W+SS VASA A   A  L+L++PS+ +T+ALL N+GD+ L+S +PEL+  +AP   LL RV+AQQ  + AN+A+ +++L R+W LP ++  AL  SL PL   P ++        +  ++Y ACR+
Sbjct:   74 QALVAALKQPPPLIERLTGGLDDPEELREAIVSSPTLSADVLRVVNSAAFALRSPISSIEHAVAYLGTTMVRGLVLQSTVGQVMKFETD--VQKAAYMRIWRSSYVASAAAQAYATALSLEHPSIHATRALLVNIGDLALISARPELSVIYAPKTGLLSRVEAQQRDVMANSAVLSSMLVRQWSLPEDLCDALRHSLTPLTWTPDDNERSTDQQRDDLLLYLACRI 297          
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Match: A0A1H9EWC2_9GAMM (HD-like signal output (HDOD) domain, no enzymatic activity n=3 Tax=Amphritea TaxID=515417 RepID=A0A1H9EWC2_9GAMM)

HSP 1 Score: 156 bits (395), Expect = 1.170e-41
Identity = 105/250 (42.00%), Postives = 150/250 (60.00%), Query Frame = 1
Query:  151 QSFTLMRLDSARNAEEPGVFRT--LVEAIPEPHAMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDIN-LLSLQPELAPHAPGCLLLERVQAQQAALGANAAMFAALLARRWGLPANIEAALDQSLLPLAVPPAEHP--LQGAALANAAVVYTACRL 885
            +S T   L  A   +E    R   L E +P+P+ +  ++ G LD   E+   +  +P L A+VLRTVNSAAF+LT+PI+SV HA+ YLGVS+VKGL++Q+A A      +    Q  A++R W S+ VASA A LL +N     PSV +T+AL  NLGD+  +L  +     +A G  +L+R++AQQ   G NAA+  + LAR WGLP +IE A+  S+LPL   PA+ P  LQ   L +  ++Y A R+
Sbjct:   55 RSLTEFNLFVASYIDEQQAARAQQLCEKLPDPNPVQAKLAGGLDTPQELVATLAADPGLTAEVLRTVNSAAFSLTSPISSVQHAVNYLGVSFVKGLVSQAATADQTKGCSEA--QRTALQRAWLSTAVASAFANLLGQNAGHPRPSVLATKALFFNLGDLGFILGEESAHTWYAEGMTVLDRIKAQQQGSGLNAAIVGSTLARSWGLPEDIERAIANSMLPLVKTPAQLPRVLQEDELKDTVLLYLAARI 302          
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Match: A0A430KUU8_9GAMM (HDOD domain-containing protein n=3 Tax=Amphritea TaxID=515417 RepID=A0A430KUU8_9GAMM)

HSP 1 Score: 155 bits (393), Expect = 2.750e-41
Identity = 108/265 (40.75%), Postives = 158/265 (59.62%), Query Frame = 1
Query:   94 LDVAPEDAAPPASGPPAALQSFTLMRLDSARNAEEPGVFRTLVEAIPEPHAMFLQVTGELDDIDEITEAVKNEPALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLPASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANLGDIN-LLSLQPELAPHAPGCLLLERVQAQQAALGANAAMFAALLARRWGLPANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL 885
            ++V PE    P    PA+L  F L+ + S  + ++    + L E +P PH +  ++ G LD   E+ E +  +P L ADVLRTVNSAAFALT+PI+S  HA+ YLGVS+VK LI+Q+A   T       + Q+ A++R+W S+ VASA A LL ++L    PSV +T+AL  NLGD+  +L  +   + +A    LL+RV+AQQ     N+++  + LAR WGLP  IE A+  S LPLA  P +  L+   L +  ++Y A R+
Sbjct:   53 VEVVPE----PPKERPASLAEFDLL-VSSQIDEQQLAQAQQLCEKLPAPHPVQAKLAGGLDTPKELIETLAADPGLTADVLRTVNSAAFALTSPISSAQHAVNYLGVSFVKSLISQAA--NTHQTKDCSAAQKTALQRVWLSTAVASAFATLLGQHLGHSRPSVLATKALFFNLGDLAFILGNEDAHSWYAEDMTLLDRVKAQQQNCRLNSSIVGSTLARNWGLPEEIERAIANSTLPLANAPTQLDLKEDELKDTILLYLAARI 310          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83925.19589.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A356VEX8_9GAMM1.770e-17692.91HDOD domain-containing protein n=7 Tax=Halieaceae ... [more]
A0A2E7C0S4_9GAMM8.680e-11772.50Histidine kinase n=1 Tax=Haliea sp. TaxID=1932666 ... [more]
A0A4R2KX73_9GAMM2.400e-4945.20HDOD domain-containing protein n=1 Tax=Chromatocur... [more]
B8KEU2_9GAMM7.760e-4843.20Putative signal transduction protein n=1 Tax=gamma... [more]
A4ACS8_9GAMM1.090e-4743.20HDOD domain protein n=1 Tax=Congregibacter litoral... [more]
A4ABI9_9GAMM8.360e-4643.03HDOD domain protein n=1 Tax=Congregibacter litoral... [more]
A0A4R2KRS5_9GAMM3.010e-4443.18HD-like signal output (HDOD) protein n=1 Tax=Chrom... [more]
B8KKJ3_9GAMM3.280e-4443.36Putative signal transduction protein n=1 Tax=gamma... [more]
A0A1H9EWC2_9GAMM1.170e-4142.00HD-like signal output (HDOD) domain, no enzymatic ... [more]
A0A430KUU8_9GAMM2.750e-4140.75HDOD domain-containing protein n=3 Tax=Amphritea T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83925contigM-pyrifera_M_contig83925:1..885 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score472.2
Seed ortholog evalue1.7e-130
Seed eggNOG ortholog1121937.AUHJ01000004_gene981
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Signal transduction protein
EggNOG OGs1R4P9@1224,1RRBF@1236,4680J@72275,COG1639@1,COG1639@2
COG Functional cat.T
Best tax levelAlteromonadaceae
Best eggNOG OGNA|NA|NA
Exons1
Model size885
Cds size870
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816746.89324-CDS-M-pyrifera_M_contig83925:0..8701622816746.89324-CDS-M-pyrifera_M_contig83925:0..870Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83925 1..870 -
1692278153.9607885-CDS-M-pyrifera_M_contig83925:0..8701692278153.9607885-CDS-M-pyrifera_M_contig83925:0..870Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83925 1..870 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816746.9046078-UTR-M-pyrifera_M_contig83925:870..8851622816746.9046078-UTR-M-pyrifera_M_contig83925:870..885Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig83925 871..885 -
1692278153.9774258-UTR-M-pyrifera_M_contig83925:870..8851692278153.9774258-UTR-M-pyrifera_M_contig83925:870..885Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig83925 871..885 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83925.19589.1prot_M-pyrifera_M_contig83925.19589.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83925 1..870 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83925.19589.1

>prot_M-pyrifera_M_contig83925.19589.1 ID=prot_M-pyrifera_M_contig83925.19589.1|Name=mRNA_M-pyrifera_M_contig83925.19589.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=290bp
MQPAAKPHAPLRVRTALQSFGANAESLDVAPEDAAPPASGPPAALQSFTL
MRLDSARNAEEPGVFRTLVEAIPEPHAMFLQVTGELDDIDEITEAVKNEP
ALAADVLRTVNSAAFALTTPIASVHHAIAYLGVSYVKGLIAQSALARTLP
ASAPGSEQEAAMRRLWKSSQVASATAFLLARNLNLDNPSVASTQALLANL
GDINLLSLQPELAPHAPGCLLLERVQAQQAALGANAAMFAALLARRWGLP
ANIEAALDQSLLPLAVPPAEHPLQGAALANAAVVYTACRL
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mRNA from alignment at M-pyrifera_M_contig83925:1..885-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83925.19589.1 ID=mRNA_M-pyrifera_M_contig83925.19589.1|Name=mRNA_M-pyrifera_M_contig83925.19589.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=885bp|location=Sequence derived from alignment at M-pyrifera_M_contig83925:1..885- (Macrocystis pyrifera P11B4 male)
CCTGCCGCCCGCGACATGCAGCCAGCGGCCAAACCGCATGCCCCACTCAG GGTGCGCACGGCGCTCCAGTCATTTGGCGCCAACGCCGAGTCCCTGGACG TCGCCCCGGAGGATGCAGCGCCCCCAGCCAGCGGCCCACCCGCCGCACTG CAGTCCTTCACGCTTATGCGTCTCGACAGTGCCCGCAATGCAGAAGAGCC CGGCGTATTCCGGACACTGGTTGAGGCCATACCCGAGCCCCATGCCATGT TCCTGCAGGTTACCGGGGAGCTTGATGACATTGATGAGATTACGGAAGCC GTGAAGAACGAGCCCGCATTGGCCGCGGATGTACTGCGCACGGTGAATTC AGCGGCCTTCGCCCTGACCACCCCCATCGCGAGCGTACACCATGCCATTG CCTATCTCGGAGTAAGTTACGTCAAGGGCCTGATTGCGCAATCCGCCCTG GCACGCACACTGCCGGCAAGCGCCCCGGGGTCGGAGCAGGAAGCGGCAAT GCGACGACTGTGGAAATCCAGCCAGGTCGCCAGCGCCACGGCATTCCTGT TGGCCCGTAACCTCAACCTCGATAACCCATCCGTCGCGTCCACCCAAGCT CTGCTGGCCAACCTGGGAGACATCAACCTGTTGTCCCTGCAACCGGAGCT CGCCCCGCACGCCCCGGGCTGCCTGCTTTTGGAGCGCGTGCAGGCGCAAC AAGCCGCTCTGGGGGCGAATGCCGCCATGTTCGCGGCACTACTCGCACGG CGCTGGGGCCTGCCAGCCAATATCGAGGCAGCACTGGACCAATCCTTGCT GCCTCTGGCAGTACCGCCTGCTGAGCACCCCCTGCAGGGAGCTGCGCTGG CCAATGCGGCCGTTGTCTACACCGCCTGCCGCCTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83925:1..885-

>mRNA_M-pyrifera_M_contig83925.19589.1 ID=mRNA_M-pyrifera_M_contig83925.19589.1|Name=mRNA_M-pyrifera_M_contig83925.19589.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1740bp|location=Sequence derived from alignment at M-pyrifera_M_contig83925:1..885- (Macrocystis pyrifera P11B4 male)
ATGCAGCCAGCGGCCAAACCGCATGCCCCACTCAGGGTGCGCACGGCGCT
CCAGTCATTTGGCGCCAACGCCGAGTCCCTGGACGTCGCCCCGGAGGATG
CAGCGCCCCCAGCCAGCGGCCCACCCGCCGCACTGCAGTCCTTCACGCTT
ATGCGTCTCGACAGTGCCCGCAATGCAGAAGAGCCCGGCGTATTCCGGAC
ACTGGTTGAGGCCATACCCGAGCCCCATGCCATGTTCCTGCAGGTTACCG
GGGAGCTTGATGACATTGATGAGATTACGGAAGCCGTGAAGAACGAGCCC
GCATTGGCCGCGGATGTACTGCGCACGGTGAATTCAGCGGCCTTCGCCCT
GACCACCCCCATCGCGAGCGTACACCATGCCATTGCCTATCTCGGAGTAA
GTTACGTCAAGGGCCTGATTGCGCAATCCGCCCTGGCACGCACACTGCCG
GCAAGCGCCCCGGGGTCGGAGCAGGAAGCGGCAATGCGACGACTGTGGAA
ATCCAGCCAGGTCGCCAGCGCCACGGCATTCCTGTTGGCCCGTAACCTCA
ACCTCGATAACCCATCCGTCGCGTCCACCCAAGCTCTGCTGGCCAACCTG
GGAGACATCAACCTGTTGTCCCTGCAACCGGAGCTCGCCCCGCACGCCCC
GGGCTGCCTGCTTTTGGAGCGCGTGCAGGCGCAACAAGCCGCTCTGGGGG
CGAATGCCGCCATGTTCGCGGCACTACTCGCACGGCGCTGGGGCCTGCCA
GCCAATATCGAGGCAGCACTGGACCAATCCTTGCTGCCTCTGGCAGTACC
GCCTGCTGAGCACCCCCTGCAGGGAGCTGCGCTGGCCAATGCGGCCGTTG
TCTACACCGCCTGCCGCCTGATGCAGCCAGCGGCCAAACCGCATGCCCCA
CTCAGGGTGCGCACGGCGCTCCAGTCATTTGGCGCCAACGCCGAGTCCCT
GGACGTCGCCCCGGAGGATGCAGCGCCCCCAGCCAGCGGCCCACCCGCCG
CACTGCAGTCCTTCACGCTTATGCGTCTCGACAGTGCCCGCAATGCAGAA
GAGCCCGGCGTATTCCGGACACTGGTTGAGGCCATACCCGAGCCCCATGC
CATGTTCCTGCAGGTTACCGGGGAGCTTGATGACATTGATGAGATTACGG
AAGCCGTGAAGAACGAGCCCGCATTGGCCGCGGATGTACTGCGCACGGTG
AATTCAGCGGCCTTCGCCCTGACCACCCCCATCGCGAGCGTACACCATGC
CATTGCCTATCTCGGAGTAAGTTACGTCAAGGGCCTGATTGCGCAATCCG
CCCTGGCACGCACACTGCCGGCAAGCGCCCCGGGGTCGGAGCAGGAAGCG
GCAATGCGACGACTGTGGAAATCCAGCCAGGTCGCCAGCGCCACGGCATT
CCTGTTGGCCCGTAACCTCAACCTCGATAACCCATCCGTCGCGTCCACCC
AAGCTCTGCTGGCCAACCTGGGAGACATCAACCTGTTGTCCCTGCAACCG
GAGCTCGCCCCGCACGCCCCGGGCTGCCTGCTTTTGGAGCGCGTGCAGGC
GCAACAAGCCGCTCTGGGGGCGAATGCCGCCATGTTCGCGGCACTACTCG
CACGGCGCTGGGGCCTGCCAGCCAATATCGAGGCAGCACTGGACCAATCC
TTGCTGCCTCTGGCAGTACCGCCTGCTGAGCACCCCCTGCAGGGAGCTGC
GCTGGCCAATGCGGCCGTTGTCTACACCGCCTGCCGCCTG
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