mRNA_M-pyrifera_M_contig83836.19578.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83836.19578.1
Unique NamemRNA_M-pyrifera_M_contig83836.19578.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Match: A0A517W5S7_9PLAN (Filament cap protein n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517W5S7_9PLAN)

HSP 1 Score: 508 bits (1309), Expect = 4.120e-172
Identity = 285/306 (93.14%), Postives = 289/306 (94.44%), Query Frame = 1
Query:   10 GTSIEIQDVSG-------------NLASTLKIDTLLADNKHTVDSGSLDLRYINQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTTGITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDYNFGFSTSVEAKDALIRIGSNPQTAFLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYNSFVD 888
            GT I I+D S              NLASTLKIDTLLADNKHTVDSGSLDLRY+NQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTTGITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDY+FGFSTSVEAKDALIRIGSNPQT+FLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYNSFVD
Sbjct:  428 GTGISIKDTSAAXXXXXXXXXXXXNLASTLKIDTLLADNKHTVDSGSLDLRYVNQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTTGITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDYDFGFSTSVEAKDALIRIGSNPQTSFLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYNSFVD 733          
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Match: A0A517ZZV1_9PLAN (Filament cap protein n=3 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A517ZZV1_9PLAN)

HSP 1 Score: 484 bits (1245), Expect = 1.980e-162
Identity = 263/296 (88.85%), Postives = 283/296 (95.61%), Query Frame = 1
Query:    1 AASGTSIEIQDVSGNLASTLKIDTLLADNKHTVDSGSLDLRYINQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTTGITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDYNFGFSTSVEAKDALIRIGSNPQTAFLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYNSFVD 888
            AASGTSIEIQDVSGNLA  LKIDTLLADNKHTVDSGSLDLRY+NQNTSL TYGKNGT + +GS+RI DRDGT+F+VDLSD  TTKT+GDVLTKINDAA TAGAQINARLNDTGDGFI+ESTGGSSFDVK+EEVSGGSVA+SLGILGSGTTG+TSRQTTEISIEATDTL+DIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDY+FGFSTSV+AKDALIRIGSNPQT+FLLTSSTNSFDDAITGLEIDL SV D PSTINVARDTSGIK+ IK+FV++YN+FVD
Sbjct:  444 AASGTSIEIQDVSGNLAGFLKIDTLLADNKHTVDSGSLDLRYVNQNTSLSTYGKNGTAVSTGSIRITDRDGTNFLVDLSDKSTTKTVGDVLTKINDAATTAGAQINARLNDTGDGFIIESTGGSSFDVKVEEVSGGSVASSLGILGSGTTGVTSRQTTEISIEATDTLSDIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDYDFGFSTSVDAKDALIRIGSNPQTSFLLTSSTNSFDDAITGLEIDLHSVSDTPSTINVARDTSGIKSVIKNFVSAYNNFVD 739          
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Match: A6C894_9PLAN (Probable lateral flagellar hook-associated protein 2 n=2 Tax=Gimesia maris TaxID=122 RepID=A6C894_9PLAN)

HSP 1 Score: 434 bits (1117), Expect = 3.860e-146
Identity = 234/283 (82.69%), Postives = 259/283 (91.52%), Query Frame = 1
Query:   40 GNLASTLKIDTLLADNKHTVDSGSLDLRYINQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTTGITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDYNFGFSTSVEAKDALIRIGSNPQTAFLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYNSFVD 888
            GNLA  LKIDT+LAD+KHTVDSGSLDLRY+N+NTSL TYGKNGT + SGS+RI DRDG SF V LSD ETTKT+GDVLTKIN+AA TAGA+INARLND GDGFIVESTGGSSFDVK+EEVS G+VAASLGI G+G TG+TSRQ TE+S+EATDTL DI EK NA+GVASATIIDDGTAFNS+RLSITSSRSGA GELILESDYNFGFSTSV+A DALIRIGSNPQT+FLLTSSTNSFDDAITGLEIDLLS G +PSTINVARDTSGIK+T+ +F+N+YNSFVD
Sbjct:  216 GNLAGFLKIDTVLADSKHTVDSGSLDLRYVNENTSLSTYGKNGTAVTSGSIRITDRDGVSFNVSLSDSETTKTVGDVLTKINEAAATAGAKINARLNDFGDGFIVESTGGSSFDVKVEEVSSGTVAASLGIKGAGATGVTSRQITEVSVEATDTLQDITEKINATGVASATIIDDGTAFNSARLSITSSRSGAAGELILESDYNFGFSTSVDADDALIRIGSNPQTSFLLTSSTNSFDDAITGLEIDLLSTGLSPSTINVARDTSGIKSTVTTFINAYNSFVD 498          
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Match: A0A518I564_9PLAN (Filament cap protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518I564_9PLAN)

HSP 1 Score: 434 bits (1117), Expect = 2.790e-143
Identity = 235/296 (79.39%), Postives = 267/296 (90.20%), Query Frame = 1
Query:    1 AASGTSIEIQDVSGNLASTLKIDTLLADNKHTVDSGSLDLRYINQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTTGITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDYNFGFSTSVEAKDALIRIGSNPQTAFLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYNSFVD 888
            A SGTSIEIQDV+GNLA  LKID +LAD KHTV SGSLDLRYIN+ TSL TY KNG  + SGS+RI DRDGTSF V+LSD ETTKT+GDVLTKIN+AA TAGAQINARLNDTGDGFIVESTGGSSFDVK+EEVS G+VAA LGILGS  TG+ SRQTT I++EATDTL DIA+KFNA+GVASATIIDDGTAFNS+RLSITSSRSGA GELILES Y+FGF+TSV+A+DALIRIGSNPQT+FLLTS+TNSFDDAITGLEI+LL +G +PSTINV RDT+GIKT +K+F+++YN+FVD
Sbjct:  438 APSGTSIEIQDVTGNLAGFLKIDAVLADGKHTVGSGSLDLRYINEETSLSTYAKNGKAVASGSIRITDRDGTSFNVNLSDSETTKTVGDVLTKINEAATTAGAQINARLNDTGDGFIVESTGGSSFDVKVEEVSSGTVAADLGILGSSATGVDSRQTTVITVEATDTLEDIADKFNATGVASATIIDDGTAFNSARLSITSSRSGASGELILESSYDFGFATSVDAEDALIRIGSNPQTSFLLTSATNSFDDAITGLEINLLDIGSSPSTINVTRDTAGIKTAVKTFISAYNNFVD 733          
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Match: A0A2E2BZ97_9PLAN (Filament cap protein n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2BZ97_9PLAN)

HSP 1 Score: 431 bits (1109), Expect = 4.260e-142
Identity = 236/283 (83.39%), Postives = 258/283 (91.17%), Query Frame = 1
Query:   40 GNLASTLKIDTLLADNKHTVDSGSLDLRYINQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTTGITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDYNFGFSTSVEAKDALIRIGSNPQTAFLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYNSFVD 888
            GNLAS LKIDTLLAD+KHTVDSGSLDLRYINQ+TSL TYGKNGT +  GS+RI DR G SF V+LSDPETTKT+GDVLTKINDAAGTAGAQ+ ARLNDTGDGFIVESTGGS+FDVK+EEVS G+VAA+LGI GSGT G+TSRQ TEIS+EATDTL DI EK NA+GVASATIIDDGTAFNS+RLSITSSRSGA G L LESD+NFGF+TSVEA DALIRIGSNPQT+FLLTSSTNSF+DAITGLEIDL SVG +PSTINVARDTSGIK+TI SF+ SYNSFVD
Sbjct:  452 GNLASFLKIDTLLADSKHTVDSGSLDLRYINQDTSLSTYGKNGTAVSLGSIRITDRAGVSFNVNLSDPETTKTVGDVLTKINDAAGTAGAQVIARLNDTGDGFIVESTGGSAFDVKVEEVSSGTVAATLGIKGSGTMGVTSRQVTEISVEATDTLEDITEKINATGVASATIIDDGTAFNSARLSITSSRSGAAGGLTLESDFNFGFATSVEADDALIRIGSNPQTSFLLTSSTNSFNDAITGLEIDLKSVGTSPSTINVARDTSGIKSTINSFITSYNSFVD 734          
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Match: A0A3D3R597_9PLAN (Flagellar hook-associated protein 2 (Fragment) n=5 Tax=Gimesia TaxID=1649453 RepID=A0A3D3R597_9PLAN)

HSP 1 Score: 422 bits (1084), Expect = 3.480e-140
Identity = 228/278 (82.01%), Postives = 253/278 (91.01%), Query Frame = 1
Query:   40 GNLASTLKIDTLLADNKHTVDSGSLDLRYINQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTTGITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDYNFGFSTSVEAKDALIRIGSNPQTAFLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSY 873
            GNLA  LKIDT+LAD+KHTVDSGSLDLRY+N+NTSL TYGKNGT + SGS+RI DRDG SF V LSD ETTKT+GDVLTKIN+AA TAGA+INARLND GDGFIVESTGGSSFDVK+EEVS G+VAASLGI G+G TG+TSRQ TE+S+EATDTL DI EK NA+GVASATIIDDGTAFNS+RLSITSSRSGA GELILESDYNFGFSTSV+A DALIRIGSNPQT+FLLTSSTNSFDDAITGLEIDL SVG +PSTINVARDTSGIK+T+ SF+ ++
Sbjct:  452 GNLAGFLKIDTVLADSKHTVDSGSLDLRYVNENTSLSTYGKNGTAVTSGSIRITDRDGVSFNVSLSDSETTKTVGDVLTKINEAAATAGAKINARLNDFGDGFIVESTGGSSFDVKVEEVSSGTVAASLGIKGAGATGVTSRQITEVSVEATDTLQDITEKINATGVASATIIDDGTAFNSARLSITSSRSGAAGELILESDYNFGFSTSVDADDALIRIGSNPQTSFLLTSSTNSFDDAITGLEIDLKSVGLSPSTINVARDTSGIKSTVNSFITAF 729          
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Match: A0A517X3A7_9PLAN (Filament cap protein n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517X3A7_9PLAN)

HSP 1 Score: 424 bits (1090), Expect = 3.070e-139
Identity = 230/296 (77.70%), Postives = 264/296 (89.19%), Query Frame = 1
Query:    1 AASGTSIEIQDVSGNLASTLKIDTLLADNKHTVDSGSLDLRYINQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTTGITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDYNFGFSTSVEAKDALIRIGSNPQTAFLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYNSFVD 888
            A SGTSIEIQDV+GNLAS LKIDT LA+ KHTVDSGSLDLRY+N+ TSL TYGKNGT + +GS+RI DRDG SF VDLSD  TTKTIGDVLTKINDAA TA AQINARLND GDGFI+ESTGGSSFDVK+EEVS G+VAA LGILGSGTT + S QTT I++EATDTL DIAEK NA+GVASA+IIDDGTAFNSSRLS+TS RSG  GE+ILES ++FGF+TSV+A+DALIRIGSNPQT+FLLTSSTNSFD+AITGLEIDLLS G +P+TI+VARDT+GIK++I +F+ +YN+FVD
Sbjct:  438 APSGTSIEIQDVTGNLASFLKIDTTLAETKHTVDSGSLDLRYVNEETSLSTYGKNGTAVSTGSIRITDRDGVSFNVDLSDATTTKTIGDVLTKINDAATTASAQINARLNDAGDGFIIESTGGSSFDVKVEEVSSGTVAADLGILGSGTTSVESNQTTVITVEATDTLDDIAEKINATGVASASIIDDGTAFNSSRLSLTSVRSGGAGEMILESSFDFGFTTSVDAEDALIRIGSNPQTSFLLTSSTNSFDNAITGLEIDLLSTGTSPATISVARDTAGIKSSINNFITAYNAFVD 733          
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Match: A0A350KEL6_9PLAN (FliD_C domain-containing protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KEL6_9PLAN)

HSP 1 Score: 235 bits (600), Expect = 5.580e-75
Identity = 130/160 (81.25%), Postives = 147/160 (91.88%), Query Frame = 1
Query:  397 VSGGSVAASLGILGSGTTGITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESDYNFGFSTSVEAKDALIRIGSNPQTAFLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYN 876
            VS G+VAASLGI G+G TG+TSRQ TE+S+EATDTL DI EK NA+GVASATIIDDGTAFNS+RLSITSSRSGA GELILESDYNFGF+TSV+A DALIRIGSNPQT+FLLTSSTNSF+DAITGLEIDL SVG +PSTINVARDTSGIK+T+ SF+ ++N
Sbjct:    1 VSSGTVAASLGIKGAGATGVTSRQITEVSVEATDTLQDITEKINATGVASATIIDDGTAFNSARLSITSSRSGAAGELILESDYNFGFATSVDADDALIRIGSNPQTSFLLTSSTNSFEDAITGLEIDLKSVGLSPSTINVARDTSGIKSTVNSFITAFN 160          
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Match: A0A350KEL5_9PLAN (Uncharacterized protein (Fragment) n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A350KEL5_9PLAN)

HSP 1 Score: 193 bits (490), Expect = 2.630e-55
Identity = 99/121 (81.82%), Postives = 110/121 (90.91%), Query Frame = 1
Query:   40 GNLASTLKIDTLLADNKHTVDSGSLDLRYINQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVS 402
            GNLA  LKIDTLLAD+KHTVDSGSLDLRY+N+NT+L TYGKNGT + SGS+RI DRDG SF V+LSD ETTKT+GDVLTKIN+AA TAGA+INARLND GDGFIVESTGGSSFDVK+EEVS
Sbjct:  280 GNLAGFLKIDTLLADSKHTVDSGSLDLRYVNENTALSTYGKNGTAVTSGSIRITDRDGVSFNVNLSDSETTKTVGDVLTKINEAAATAGAKINARLNDFGDGFIVESTGGSSFDVKVEEVS 400          
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Match: A0A3B1E858_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B1E858_9ZZZZ)

HSP 1 Score: 189 bits (481), Expect = 6.150e-51
Identity = 126/312 (40.38%), Postives = 190/312 (60.90%), Query Frame = 1
Query:   10 GTSIEIQDVSGNLA----------STLKIDTLLADN--KHTVDSGSLDLRYINQNTSLETYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGTAGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTTG------ITSRQTTEISIEATDTLADIAEKFN-ASGVASATIIDDGTAFNSSRLSITSSRSGAGGELILESD-YNFGFSTSVEAKDALIRIGSNPQTAFLLTSSTNSFDDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYNSFV 885
            GT I I D+SG+ A          ST+  D  +  N    ++DSGSL LRY+N+ TSL  Y  +GT + +GS++I D  G   +V +S   +T T+GDV+T+IN A G    Q+ A+LNDTGDGF++      +  + + E SGGS AA L +LG+G         I S+  T I+++ATDTL+ IA K N A G+A+A+  DDG+AFNS+RLSITS  SG  G LI++      G  T+ +  DAL+R+GS+  + F+++SS N+F +   G++I  ++ G +   +++ RDT  IK+ +  FV+SYN ++
Sbjct:  424 GTGITITDISGSTAGNFIIADVTTSTVAADLGITINAASDSIDSGSLGLRYVNEATSLSNYAPDGTSVDNGSIKITDSAGNEAIVSIS--TSTLTVGDVITRINAATGI---QVTAQLNDTGDGFVLIDEAAGAGTLSVTE-SGGSTAADLRLLGNGAIASDGKLHIESQLVTTITVDATDTLSSIATKINDAGGLATASTFDDGSAFNSARLSITSKTSGRAGRLIIDDGGLGLGLVTTAQGNDALLRVGSSVASGFVVSSSNNTFTNIAQGVDITAVAAGSSIKQVSLKRDTGSIKSLLAGFVSSYNGYI 729          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83836.19578.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517W5S7_9PLAN4.120e-17293.14Filament cap protein n=6 Tax=Gimesia TaxID=1649453... [more]
A0A517ZZV1_9PLAN1.980e-16288.85Filament cap protein n=3 Tax=Gimesia panareensis T... [more]
A6C894_9PLAN3.860e-14682.69Probable lateral flagellar hook-associated protein... [more]
A0A518I564_9PLAN2.790e-14379.39Filament cap protein n=2 Tax=Gimesia TaxID=1649453... [more]
A0A2E2BZ97_9PLAN4.260e-14283.39Filament cap protein n=3 Tax=Planctomycetaceae Tax... [more]
A0A3D3R597_9PLAN3.480e-14082.01Flagellar hook-associated protein 2 (Fragment) n=5... [more]
A0A517X3A7_9PLAN3.070e-13977.70Filament cap protein n=2 Tax=Gimesia aquarii TaxID... [more]
A0A350KEL6_9PLAN5.580e-7581.25FliD_C domain-containing protein (Fragment) n=1 Ta... [more]
A0A350KEL5_9PLAN2.630e-5581.82Uncharacterized protein (Fragment) n=1 Tax=Plancto... [more]
A0A3B1E858_9ZZZZ6.150e-5140.38Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83836contigM-pyrifera_M_contig83836:1..888 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score444.5
Seed ortholog evalue3.9e-122
Seed eggNOG ortholog344747.PM8797T_07844
Preferred namefliD
KEGG koko:K02407
KEGG Pathwayko02040,map02040
Hectar predicted targeting categoryother localisation
GOsGO:0001539,GO:0003674,GO:0005198,GO:0005575,GO:0005576,GO:0005623,GO:0006928,GO:0008150,GO:0009288,GO:0009420,GO:0009421,GO:0009424,GO:0009987,GO:0040011,GO:0042995,GO:0043226,GO:0043228,GO:0044422,GO:0044461,GO:0044463,GO:0044464,GO:0048870,GO:0051179,GO:0051674,GO:0071973,GO:0071978,GO:0097588
EggNOG free text desc.flagellar hook-associated protein 2
EggNOG OGs2IXUU@203682,COG1345@1,COG1345@2
COG Functional cat.N
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko02035
Exons1
Model size888
Cds size888
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816746.3668654-CDS-M-pyrifera_M_contig83836:0..8881622816746.3668654-CDS-M-pyrifera_M_contig83836:0..888Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83836 1..888 -
1692278153.6187649-CDS-M-pyrifera_M_contig83836:0..8881692278153.6187649-CDS-M-pyrifera_M_contig83836:0..888Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83836 1..888 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83836.19578.1prot_M-pyrifera_M_contig83836.19578.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83836 1..888 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83836.19578.1

>prot_M-pyrifera_M_contig83836.19578.1 ID=prot_M-pyrifera_M_contig83836.19578.1|Name=mRNA_M-pyrifera_M_contig83836.19578.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=296bp
AASGTSIEIQDVSGNLASTLKIDTLLADNKHTVDSGSLDLRYINQNTSLE
TYGKNGTEIPSGSVRIIDRDGTSFVVDLSDPETTKTIGDVLTKINDAAGT
AGAQINARLNDTGDGFIVESTGGSSFDVKIEEVSGGSVAASLGILGSGTT
GITSRQTTEISIEATDTLADIAEKFNASGVASATIIDDGTAFNSSRLSIT
SSRSGAGGELILESDYNFGFSTSVEAKDALIRIGSNPQTAFLLTSSTNSF
DDAITGLEIDLLSVGDAPSTINVARDTSGIKTTIKSFVNSYNSFVD
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mRNA from alignment at M-pyrifera_M_contig83836:1..888-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83836.19578.1 ID=mRNA_M-pyrifera_M_contig83836.19578.1|Name=mRNA_M-pyrifera_M_contig83836.19578.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=888bp|location=Sequence derived from alignment at M-pyrifera_M_contig83836:1..888- (Macrocystis pyrifera P11B4 male)
GCCGCCTCGGGTACATCGATTGAAATTCAGGACGTGAGTGGCAATCTCGC GAGCACACTCAAAATCGACACACTACTGGCAGATAACAAACACACGGTCG ACTCCGGTTCGCTCGACCTGCGGTACATCAATCAGAATACATCACTGGAA ACCTACGGAAAAAACGGGACCGAGATCCCATCGGGCAGCGTTCGCATTAT CGACCGCGACGGTACCAGCTTCGTAGTCGACCTGTCCGACCCGGAGACGA CCAAAACCATCGGCGATGTGCTCACAAAAATCAACGATGCCGCAGGAACC GCGGGCGCTCAGATCAATGCCCGCCTGAATGACACCGGCGATGGATTCAT CGTGGAAAGCACCGGGGGCAGTTCATTTGATGTAAAGATCGAAGAAGTCT CAGGAGGTTCGGTCGCAGCCAGCCTGGGTATTCTGGGTTCTGGAACTACC GGCATTACCAGTCGACAGACCACGGAAATTTCCATCGAAGCAACCGACAC CCTGGCAGACATCGCCGAGAAGTTCAATGCCTCTGGAGTGGCCTCCGCTA CGATCATCGACGACGGAACCGCCTTTAATTCATCGCGGCTGTCAATCACA TCTTCACGCAGTGGTGCAGGCGGCGAGTTGATTCTGGAAAGCGACTATAA TTTCGGGTTTTCGACCTCCGTCGAAGCCAAAGACGCGTTGATCCGCATCG GCAGTAACCCCCAGACAGCCTTCCTGCTGACTTCATCGACCAACAGTTTC GATGATGCCATCACCGGACTGGAAATCGATCTGCTCTCGGTCGGAGACGC ACCGTCCACAATCAATGTGGCCCGCGATACATCCGGCATCAAAACAACGA TCAAGAGCTTCGTGAACTCCTACAACAGTTTTGTCGAT
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83836:1..888-

>mRNA_M-pyrifera_M_contig83836.19578.1 ID=mRNA_M-pyrifera_M_contig83836.19578.1|Name=mRNA_M-pyrifera_M_contig83836.19578.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1776bp|location=Sequence derived from alignment at M-pyrifera_M_contig83836:1..888- (Macrocystis pyrifera P11B4 male)
GCCGCCTCGGGTACATCGATTGAAATTCAGGACGTGAGTGGCAATCTCGC
GAGCACACTCAAAATCGACACACTACTGGCAGATAACAAACACACGGTCG
ACTCCGGTTCGCTCGACCTGCGGTACATCAATCAGAATACATCACTGGAA
ACCTACGGAAAAAACGGGACCGAGATCCCATCGGGCAGCGTTCGCATTAT
CGACCGCGACGGTACCAGCTTCGTAGTCGACCTGTCCGACCCGGAGACGA
CCAAAACCATCGGCGATGTGCTCACAAAAATCAACGATGCCGCAGGAACC
GCGGGCGCTCAGATCAATGCCCGCCTGAATGACACCGGCGATGGATTCAT
CGTGGAAAGCACCGGGGGCAGTTCATTTGATGTAAAGATCGAAGAAGTCT
CAGGAGGTTCGGTCGCAGCCAGCCTGGGTATTCTGGGTTCTGGAACTACC
GGCATTACCAGTCGACAGACCACGGAAATTTCCATCGAAGCAACCGACAC
CCTGGCAGACATCGCCGAGAAGTTCAATGCCTCTGGAGTGGCCTCCGCTA
CGATCATCGACGACGGAACCGCCTTTAATTCATCGCGGCTGTCAATCACA
TCTTCACGCAGTGGTGCAGGCGGCGAGTTGATTCTGGAAAGCGACTATAA
TTTCGGGTTTTCGACCTCCGTCGAAGCCAAAGACGCGTTGATCCGCATCG
GCAGTAACCCCCAGACAGCCTTCCTGCTGACTTCATCGACCAACAGTTTC
GATGATGCCATCACCGGACTGGAAATCGATCTGCTCTCGGTCGGAGACGC
ACCGTCCACAATCAATGTGGCCCGCGATACATCCGGCATCAAAACAACGA
TCAAGAGCTTCGTGAACTCCTACAACAGTTTTGTCGATGCCGCCTCGGGT
ACATCGATTGAAATTCAGGACGTGAGTGGCAATCTCGCGAGCACACTCAA
AATCGACACACTACTGGCAGATAACAAACACACGGTCGACTCCGGTTCGC
TCGACCTGCGGTACATCAATCAGAATACATCACTGGAAACCTACGGAAAA
AACGGGACCGAGATCCCATCGGGCAGCGTTCGCATTATCGACCGCGACGG
TACCAGCTTCGTAGTCGACCTGTCCGACCCGGAGACGACCAAAACCATCG
GCGATGTGCTCACAAAAATCAACGATGCCGCAGGAACCGCGGGCGCTCAG
ATCAATGCCCGCCTGAATGACACCGGCGATGGATTCATCGTGGAAAGCAC
CGGGGGCAGTTCATTTGATGTAAAGATCGAAGAAGTCTCAGGAGGTTCGG
TCGCAGCCAGCCTGGGTATTCTGGGTTCTGGAACTACCGGCATTACCAGT
CGACAGACCACGGAAATTTCCATCGAAGCAACCGACACCCTGGCAGACAT
CGCCGAGAAGTTCAATGCCTCTGGAGTGGCCTCCGCTACGATCATCGACG
ACGGAACCGCCTTTAATTCATCGCGGCTGTCAATCACATCTTCACGCAGT
GGTGCAGGCGGCGAGTTGATTCTGGAAAGCGACTATAATTTCGGGTTTTC
GACCTCCGTCGAAGCCAAAGACGCGTTGATCCGCATCGGCAGTAACCCCC
AGACAGCCTTCCTGCTGACTTCATCGACCAACAGTTTCGATGATGCCATC
ACCGGACTGGAAATCGATCTGCTCTCGGTCGGAGACGCACCGTCCACAAT
CAATGTGGCCCGCGATACATCCGGCATCAAAACAACGATCAAGAGCTTCG
TGAACTCCTACAACAGTTTTGTCGAT
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