mRNA_M-pyrifera_M_contig83811.19566.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83811.19566.1
Unique NamemRNA_M-pyrifera_M_contig83811.19566.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Match: A0A812UGU2_9DINO (Hcp protein n=5 Tax=Sar TaxID=2698737 RepID=A0A812UGU2_9DINO)

HSP 1 Score: 325 bits (832), Expect = 9.850e-105
Identity = 158/263 (60.08%), Postives = 197/263 (74.90%), Query Frame = 1
Query:    1 GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGIPTVENRDFSKVIALAQELDGFAVTEEPNMIMGGFGHEAILSVADKVLEAAQGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGKQD-YGVLPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLELSWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNLQIIDTSNAKGSVDHVM 786
            G++GGPW LQ+F+FRRFPGPI+MTTNC+ EP+  Y DRI+T NEVGW     V  RD+SK+I  A+ ++GF  TE     + GFGH A++SVA  VL+A + G+L+++VLIGGCDG EG+RSYFT LAQ LPD A +LTLGC K+R+L K     V+P T IPR+LDMGQCNDAY AV VA +LA AL   +N LPLSL LSWLEQKAVAVLLSLLHLGVK IR+GP+ PAFVTPN+   L DGF+L+++D   A+     +M
Sbjct:  327 GHYGGPWNLQKFEFRRFPGPILMTTNCIMEPQTAYADRIYTANEVGWPSTQHVTGRDYSKLIEQAKAMEGFPETEPEKTTLTGFGHSAVMSVAGDVLKAIEDGNLKQLVLIGGCDGFEGERSYFTKLAQALPDEAAILTLGCGKFRVLNKTSGSAVIPNTGIPRVLDMGQCNDAYSAVHVATELAGALKCGVNDLPLSLALSWLEQKAVAVLLSLLHLGVKGIRVGPSAPAFVTPNIYKALQDGFDLKVVDADAAEADAAEMM 589          
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Match: A0A8J1XPW6_OWEFU (Ofus.G043286 protein n=1 Tax=Owenia fusiformis TaxID=6347 RepID=A0A8J1XPW6_OWEFU)

HSP 1 Score: 299 bits (765), Expect = 3.610e-94
Identity = 151/270 (55.93%), Postives = 196/270 (72.59%), Query Frame = 1
Query:    1 GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGIPTVE-NRD--FSKVIALAQELDGFAVTEEP----NMIMGGFGHEAILSVADKVLEAAQGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGKQDYGVLPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLELSWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNLQIIDTSNAKGSVDHVMG 789
            G+FGG WQ Q+F+F  FPGPIV+TTNCL EP + Y++RIFT+NE G+ G+P ++ N+   F  V+ +A E+ GF  T        ++  GFGH+AIL+ ADKV+EA Q G L+R+ ++GGCDGSE  RSY+T +   LP   ++LTLGCAKYR     D G+L  + IPRLLDMGQCNDAYGAVVVA  LA+A NTD+NSLPLS+ LSW EQKAVAVLLSLLHLG+K+IR+GP  PAF+TP +L+ LV+ FN+Q  D  +    +  +MG
Sbjct:  366 GHFGGAWQNQKFEFPTFPGPIVITTNCLVEPLKSYKNRIFTLNECGFSGVPHLDINKPNAFDPVLKIANEMRGFTETSAKASNNKVLTIGFGHDAILANADKVIEAVQTGGLKRVFVVGGCDGSENKRSYYTSIVDNLPKETIVLTLGCAKYRF-NSHDLGMLGDSGIPRLLDMGQCNDAYGAVVVASALAKAFNTDVNSLPLSIALSWFEQKAVAVLLSLLHLGIKNIRVGPVLPAFITPTVLDILVEKFNIQPTDNRHPLDDLHLMMG 634          
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Match: UPI0019FF99F9 (Hydroxylamine reductase n=1 Tax=Proteobacteria bacterium TaxID=1977087 RepID=UPI0019FF99F9)

HSP 1 Score: 294 bits (753), Expect = 2.120e-93
Identity = 142/251 (56.57%), Postives = 181/251 (72.11%), Query Frame = 1
Query:    1 GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGIPTVENRDFSKVIALAQELDGFAVTEEPNMIMGGFGHEAILSVADKVLEAAQGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGKQDYGVLPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLELSWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNLQIIDT 753
            GN+GG WQ QR +F  FPG I+MTTNC+Q+P+  YRDRIFT   VGW G+  + +RDF+ VI   Q  +GF        I+ GFGH A+L VADKV+EA + G +    LIGGCDG++  R+Y+T+LAQ +P   ++LTLGC KYR   K D+G + G  IPRLLD+GQCNDAY A+ +A +LA+A +TD+NSLPLSL LSW EQKAV +LL+LLHLG++DIRLGP  PAFVTP  LN LV+ FN+  I T
Sbjct:  290 GNYGGAWQAQRKEFEAFPGAILMTTNCIQQPRASYRDRIFTTGVVGWPGVKHISDRDFTPVIEATQAAEGFKEDGSDRTILVGFGHHAVLGVADKVIEAVKAGKIRHFFLIGGCDGAKLGRNYYTELAQAVPKDCLILTLGCGKYRF-NKLDFGDIDG--IPRLLDVGQCNDAYSAIQIALELAKAFDTDVNSLPLSLNLSWFEQKAVVILLTLLHLGIRDIRLGPTLPAFVTPTALNVLVEKFNIMPITT 537          
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Match: A0A2P6U2E8_CHLSO (Hydroxylamine reductase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6U2E8_CHLSO)

HSP 1 Score: 296 bits (758), Expect = 4.500e-93
Identity = 145/266 (54.51%), Postives = 185/266 (69.55%), Query Frame = 1
Query:    1 GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGIPTVENR-----DFSKVIALAQELDGFA---VTEEPNMIMGGFGHEAILSVADKVLEAAQGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGKQDYGVLPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLELSWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNLQIIDTSNAKGSV 774
            GN+GG W  Q+ +F  FPGPI+MTTNC+ EPK+ Y DRI+T  EVGW G+  +E +     D+S VI  A E+ GFA     EE   +M GF   A+L VA +V++A Q G L+ I L+GGCDG E DR YFT +A   PD  ++LTLGC K+R     DYG+LPGT +PR+LDMGQCNDAY A+VVA KLAE   TD+N LPLSL+LSWLEQKAV +LL+LLHL VK+IR+GP  PAF+TP  L  +VD +NLQ+ D  + +  +
Sbjct:  373 GNYGGAWYAQQKEFAEFPGPILMTTNCISEPKKSYHDRIWTTGEVGWPGVGHIEGKPGQTKDYSAVINKALEMPGFAWEPKEEEVKTVMTGFARNAVLGVAGEVVKAVQEGHLKHIFLVGGCDGHEPDRKYFTQVADGTPDDTLLLTLGCGKFRFYD-HDYGMLPGTSLPRMLDMGQCNDAYSAIVVASKLAEVFGTDVNGLPLSLDLSWLEQKAVIILLTLLHLNVKNIRIGPKAPAFLTPESLAVIVDKWNLQVTDVKHPEADL 637          
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Match: A0A2P6VE53_9CHLO (Hydroxylamine reductase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VE53_9CHLO)

HSP 1 Score: 296 bits (757), Expect = 5.490e-93
Identity = 144/273 (52.75%), Postives = 190/273 (69.60%), Query Frame = 1
Query:    1 GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGIPTV-----ENRDFSKVIALAQELDGFAVTEEPN-----MIMGGFGHEAILSVADKVLEAAQGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGKQDYGV-LPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLELSWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNLQIIDTSNAKGSVDHVM 786
            GN+G  W  Q+ +F  FPGPI+MTTNC+ EP++ Y++RIFT N+VGW G+  V     + +DFS +I  AQ+  GF    E N      +  GF H A+L VA +V++A Q G+L+ I LIGGC+GSE DR YF   A + PD+ ++LTLGC K+R     D    +P T +PRL+DMGQCNDAY A+VVA KLAEA  TD+N LPLSL+LSWLEQKAV VLL+LLHLG+K+IR+GPNPPAF+TP  L  LV+ FNLQ++D  N    ++ ++
Sbjct:  363 GNYGNAWYRQQKEFSEFPGPILMTTNCIIEPRQAYKNRIFTTNDVGWAGVSHVPGGPGQTKDFSALIKAAQDAQGFTSEPEDNGEPVKTVTTGFAHNAVLGVAGEVVKAVQEGNLKHIFLIGGCEGSEPDRRYFGQTADKTPDNTMILTLGCGKFRFYDHPDLQKNIPNTPLPRLVDMGQCNDAYSAIVVASKLAEAFGTDVNGLPLSLDLSWLEQKAVVVLLTLLHLGIKNIRIGPNPPAFLTPESLGVLVEKFNLQVVDAKNPDRDIEKML 635          
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Match: E1Z521_CHLVA (Uncharacterized protein n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1Z521_CHLVA)

HSP 1 Score: 295 bits (756), Expect = 7.730e-93
Identity = 148/270 (54.81%), Postives = 185/270 (68.52%), Query Frame = 1
Query:    1 GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGIPTVEN-----RDFSKVIALAQELDGFAVT---EEPNMIMGGFGHEAILSVADKVLEAAQGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGKQDYGVLPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLELSWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNLQIIDTSNAKGSVDHVM 786
            GN+GG W  Q+ DF  FPG ++MTTNC+ EP++ Y DRIFT  EVGW G+  +E      +D+S +I+ AQEL GF       E   +  GF   A+L VA +V++A Q G L+ I LIGGCDGSE DR YF  +A   P   ++LTLGC K+R     D+G+LP T +PRL+DMGQCNDAY AVVVA KLAE   TDIN LPLSL+LSWLEQKAV +LLSLLHL VK+IR+GP  PAF+TP  L  +VD +NLQI+DT N +  V  +M
Sbjct:  367 GNYGGAWYRQQKDFAEFPGAVLMTTNCIVEPRQSYADRIFTTGEVGWAGVRHIEGEMGRTKDYSALISKAQELPGFEYEPPESEAKFVTTGFARNAVLGVAGEVVKAVQEGHLKHIFLIGGCDGSEPDRKYFGRVADATPQDTMVLTLGCGKFRFYD-HDFGMLPNTPLPRLVDMGQCNDAYSAVVVASKLAEVFGTDINGLPLSLDLSWLEQKAVIILLSLLHLNVKNIRIGPRAPAFLTPEALKVIVDKWNLQIVDTKNPESDVQKMM 635          
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Match: A0A2P6TW37_CHLSO (Hydroxylamine reductase n=1 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TW37_CHLSO)

HSP 1 Score: 303 bits (776), Expect = 1.010e-92
Identity = 149/272 (54.78%), Postives = 195/272 (71.69%), Query Frame = 1
Query:    1 GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGIPTVENR-----DFSKVIALAQELDGFAVTEEP-----NMIMGGFGHEAILSVADKVLEAAQGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGKQDYGVLPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLELSWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNLQIIDTSNAKGSVDHVM 786
            GN+GG W  Q+ DF  FPG I+MTTNC+ EP++ Y+DRIFT  EVGW G+P +E +     D+S++I  AQE+ GF  TEEP       +  GF   A+L VA +V++A Q G+L+ I L+GGCDGSE +R YF  +A+  P+  ++LTLGC K+R     D+G+LPGT +PRL+DMGQCNDAY A+VVA KLAE   TD+N LPLSL+LSWLEQKAV +LL+LLHLGVK+IR+GP  PAF+TP  L  +VD +NLQI DT + K  V+ +M
Sbjct:  727 GNYGGAWYRQQKDFSDFPGAILMTTNCIIEPRQSYKDRIFTTGEVGWSGVPHIEGKPGQTKDYSELIEKAQEMPGF--TEEPAESEAKFVTTGFARNAVLGVAGEVVKAVQEGNLKHIFLVGGCDGSEPERRYFGQVAKATPEDTMLLTLGCGKFRFYD-HDFGMLPGTSLPRLVDMGQCNDAYSAIVVASKLAEVFGTDVNGLPLSLDLSWLEQKAVIILLTLLHLGVKNIRIGPKAPAFLTPEALKVVVDKWNLQISDTKHPKADVEKMM 995          
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Match: A0A1S3K988_LINUN (uncharacterized protein LOC106179825 n=1 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3K988_LINUN)

HSP 1 Score: 294 bits (752), Expect = 2.770e-92
Identity = 145/267 (54.31%), Postives = 191/267 (71.54%), Query Frame = 1
Query:    1 GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGIPTVE-NRDFSKVIALAQELDGFAVTE---EPNMIMGGFGHEAILSVADKVLEAAQGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGKQDYGVLPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLELSWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNLQIIDTSNAKGSVDHVMG 789
            G+FGG WQLQ+F+F  FPGP+V+TTNC+ EP + Y++R+FT+N+ GW G+  ++  RD  +VI LA EL GF   +   E   +  GFG + +L  ADKV+EA + G L+RI ++GGCDG+E  R+YF  L   LP   V+LT+GCAK+R   +++ G L  T +PRLLDMGQCND+YGAVVVA  LA A  TDINSLPLS+ LSW EQKAVAVLLSLLHLGVK+IRLGP  PAF+TP +L+ LVD + +  +D  + K  +  +MG
Sbjct:  366 GHFGGAWQLQQFEFPTFPGPVVITTNCMIEPMKSYKNRLFTLNDCGWPGVEHIDIARDMDRVIKLADELKGFPEADDKTEEQFLSVGFGRDVLLDNADKVIEAVKSGELKRIFVVGGCDGAEHKRNYFATLVDSLPPETVVLTMGCAKFRF-NRKELGTLGTTGLPRLLDMGQCNDSYGAVVVANALAGAFETDINSLPLSIALSWFEQKAVAVLLSLLHLGVKNIRLGPVLPAFITPTVLDILVDKYQISAVDVRHPKEDLKLMMG 631          
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Match: A0A5J4Z238_PORPP (Hydroxylamine reductase n=1 Tax=Porphyridium purpureum TaxID=35688 RepID=A0A5J4Z238_PORPP)

HSP 1 Score: 294 bits (752), Expect = 3.700e-92
Identity = 135/246 (54.88%), Postives = 185/246 (75.20%), Query Frame = 1
Query:    1 GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGIPTVENRDFSKVIALAQELDGFAVTEEPNMIMGGFGHEAILSVADKVLEAAQGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGKQDYGVLPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLELSWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNL 738
            GN+GG W LQ+ +F  FPGPI++TTNC+ EP++ YRDRI+++N VG+ G+  +E+R+F+ ++  A E+DGF   E+      GFGH A+L +ADKV+ A + G +    LIGGCDGSEG+R+Y+ +LA  +P+  V+LTL C KYR   K+++GV+PGT IPRLLD+GQCNDA+ A+ +A  LA A  TD+N LPLS  LS+LEQKA  +LLSLLHLGV++IRLGP  PAF+TPN+LN LV+ +NL
Sbjct:  385 GNYGGAWMLQKIEFAAFPGPILVTTNCILEPRKSYRDRIYSVNAVGYNGVRHLEDRNFAPLVQQALEMDGFVADEKEQYTTTGFGHNAVLGIADKVISAVKEGKIRHFFLIGGCDGSEGERNYYAELAGAVPEDCVILTLACGKYRF-NKREFGVVPGTAIPRLLDVGQCNDAHSAIQIAAALAGAFKTDVNGLPLSFALSYLEQKATIILLSLLHLGVQNIRLGPRLPAFLTPNVLNLLVEKYNL 629          
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Match: UPI001F013297 (hydroxylamine reductase n=1 Tax=Pleomorphomonas sp. COJ-58 TaxID=2766474 RepID=UPI001F013297)

HSP 1 Score: 287 bits (735), Expect = 6.370e-91
Identity = 144/246 (58.54%), Postives = 177/246 (71.95%), Query Frame = 1
Query:    1 GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGIPTVENRDFSKVIALAQELDGFAVTEEPNMIMGGFGHEAILSVADKVLEAAQGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGKQDYGVLPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLELSWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNL 738
            G+FGG W LQ+ +F  FPG I+MTTNCL  P   Y  R+FT N VGW GI  +E RDFS VIA A    GF  + +    + GFGH+A+L VADKV++A + G ++   LIGGCDGSEG+RSY+TDLA  +P   V+LTLGC KYR+LG  DYG + G  +PRLLDMGQCND++ AV VA  LA+A N  +N LPLS+ LSW EQKAV VLL+LLHLGVK+IR+GP  PAFV+ N+L  LVD FNL
Sbjct:  269 GHFGGAWMLQQREFPNFPGAILMTTNCLMSPFETYEGRLFTRNLVGWPGISHIEGRDFSAVIASALAAPGFTDSAKTGEHLVGFGHDAVLGVADKVIDAVKSGEIKHFALIGGCDGSEGERSYYTDLATTIPKDWVILTLGCGKYRVLG-HDYGTVAG--LPRLLDMGQCNDSFSAVKVAMALADAFNCGLNDLPLSIVLSWFEQKAVCVLLALLHLGVKNIRIGPKLPAFVSSNVLKVLVDTFNL 511          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83811.19566.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A812UGU2_9DINO9.850e-10560.08Hcp protein n=5 Tax=Sar TaxID=2698737 RepID=A0A812... [more]
A0A8J1XPW6_OWEFU3.610e-9455.93Ofus.G043286 protein n=1 Tax=Owenia fusiformis Tax... [more]
UPI0019FF99F92.120e-9356.57Hydroxylamine reductase n=1 Tax=Proteobacteria bac... [more]
A0A2P6U2E8_CHLSO4.500e-9354.51Hydroxylamine reductase n=1 Tax=Chlorella sorokini... [more]
A0A2P6VE53_9CHLO5.490e-9352.75Hydroxylamine reductase n=1 Tax=Micractinium condu... [more]
E1Z521_CHLVA7.730e-9354.81Uncharacterized protein n=1 Tax=Chlorella variabil... [more]
A0A2P6TW37_CHLSO1.010e-9254.78Hydroxylamine reductase n=1 Tax=Chlorella sorokini... [more]
A0A1S3K988_LINUN2.770e-9254.31uncharacterized protein LOC106179825 n=1 Tax=Lingu... [more]
A0A5J4Z238_PORPP3.700e-9254.88Hydroxylamine reductase n=1 Tax=Porphyridium purpu... [more]
UPI001F0132976.370e-9158.54hydroxylamine reductase n=1 Tax=Pleomorphomonas sp... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83811contigM-pyrifera_M_contig83811:3..800 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score299.3
Seed ortholog evalue1.8e-78
Seed eggNOG ortholog554065.XP_005851548.1
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Hybrid-cluster protein
EggNOG OGs2QQAR@2759,34J0Z@3041,37ZI8@33090,COG1151@1
COG Functional cat.C
BiGG ReactioniRC1080.CRv4_Au5_s9_g15305_t1
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
Exons1
Model size798
Cds size798
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816745.913568-CDS-M-pyrifera_M_contig83811:2..8001622816745.913568-CDS-M-pyrifera_M_contig83811:2..800Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83811 3..800 +
1692278153.391939-CDS-M-pyrifera_M_contig83811:2..8001692278153.391939-CDS-M-pyrifera_M_contig83811:2..800Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83811 3..800 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83811.19566.1prot_M-pyrifera_M_contig83811.19566.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83811 3..800 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83811.19566.1

>prot_M-pyrifera_M_contig83811.19566.1 ID=prot_M-pyrifera_M_contig83811.19566.1|Name=mRNA_M-pyrifera_M_contig83811.19566.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=266bp
GNFGGPWQLQRFDFRRFPGPIVMTTNCLQEPKRGYRDRIFTMNEVGWEGI
PTVENRDFSKVIALAQELDGFAVTEEPNMIMGGFGHEAILSVADKVLEAA
QGGSLERIVLIGGCDGSEGDRSYFTDLAQELPDSAVMLTLGCAKYRLLGK
QDYGVLPGTEIPRLLDMGQCNDAYGAVVVAQKLAEALNTDINSLPLSLEL
SWLEQKAVAVLLSLLHLGVKDIRLGPNPPAFVTPNMLNTLVDGFNLQIID
TSNAKGSVDHVMGRA*
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mRNA from alignment at M-pyrifera_M_contig83811:3..800+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83811.19566.1 ID=mRNA_M-pyrifera_M_contig83811.19566.1|Name=mRNA_M-pyrifera_M_contig83811.19566.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=798bp|location=Sequence derived from alignment at M-pyrifera_M_contig83811:3..800+ (Macrocystis pyrifera P11B4 male)
GGTAACTTTGGAGGACCATGGCAATTGCAACGCTTTGATTTCCGTCGCTT CCCAGGGCCAATTGTGATGACCACAAACTGCTTGCAAGAACCCAAGCGAG GGTATCGCGACCGCATTTTCACCATGAACGAAGTTGGGTGGGAAGGAATC CCAACTGTGGAAAACCGCGACTTTTCAAAAGTGATTGCGTTGGCGCAAGA ATTGGATGGATTTGCAGTGACGGAAGAACCCAACATGATCATGGGTGGAT TTGGCCATGAAGCAATCCTTAGTGTTGCGGACAAGGTGCTTGAAGCAGCT CAGGGTGGATCTTTGGAGCGAATTGTCCTTATTGGCGGTTGTGATGGCTC TGAAGGTGATCGATCCTACTTTACAGATTTGGCACAAGAACTGCCAGATT CTGCTGTCATGTTGACTCTTGGTTGCGCAAAGTACCGTCTTCTTGGAAAG CAAGACTATGGGGTGCTTCCAGGAACAGAAATCCCACGTCTTCTTGACAT GGGTCAATGCAATGATGCATATGGTGCAGTGGTTGTGGCGCAGAAGTTGG CAGAAGCATTGAACACAGATATCAACTCTCTCCCTCTGTCTTTGGAGCTC TCGTGGCTTGAACAAAAGGCAGTCGCTGTCCTTCTCTCTCTTCTTCATCT TGGAGTCAAAGACATTCGTCTTGGACCAAACCCACCAGCCTTTGTCACAC CAAACATGCTCAACACACTTGTGGATGGATTCAACCTCCAAATCATTGAC ACTTCCAATGCCAAGGGATCTGTTGACCACGTCATGGGACGTGCATGA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83811:3..800+

>mRNA_M-pyrifera_M_contig83811.19566.1 ID=mRNA_M-pyrifera_M_contig83811.19566.1|Name=mRNA_M-pyrifera_M_contig83811.19566.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1596bp|location=Sequence derived from alignment at M-pyrifera_M_contig83811:3..800+ (Macrocystis pyrifera P11B4 male)
GGTAACTTTGGAGGACCATGGCAATTGCAACGCTTTGATTTCCGTCGCTT
CCCAGGGCCAATTGTGATGACCACAAACTGCTTGCAAGAACCCAAGCGAG
GGTATCGCGACCGCATTTTCACCATGAACGAAGTTGGGTGGGAAGGAATC
CCAACTGTGGAAAACCGCGACTTTTCAAAAGTGATTGCGTTGGCGCAAGA
ATTGGATGGATTTGCAGTGACGGAAGAACCCAACATGATCATGGGTGGAT
TTGGCCATGAAGCAATCCTTAGTGTTGCGGACAAGGTGCTTGAAGCAGCT
CAGGGTGGATCTTTGGAGCGAATTGTCCTTATTGGCGGTTGTGATGGCTC
TGAAGGTGATCGATCCTACTTTACAGATTTGGCACAAGAACTGCCAGATT
CTGCTGTCATGTTGACTCTTGGTTGCGCAAAGTACCGTCTTCTTGGAAAG
CAAGACTATGGGGTGCTTCCAGGAACAGAAATCCCACGTCTTCTTGACAT
GGGTCAATGCAATGATGCATATGGTGCAGTGGTTGTGGCGCAGAAGTTGG
CAGAAGCATTGAACACAGATATCAACTCTCTCCCTCTGTCTTTGGAGCTC
TCGTGGCTTGAACAAAAGGCAGTCGCTGTCCTTCTCTCTCTTCTTCATCT
TGGAGTCAAAGACATTCGTCTTGGACCAAACCCACCAGCCTTTGTCACAC
CAAACATGCTCAACACACTTGTGGATGGATTCAACCTCCAAATCATTGAC
ACTTCCAATGCCAAGGGATCTGTTGACCACGTCATGGGACGTGCATGAGG
TAACTTTGGAGGACCATGGCAATTGCAACGCTTTGATTTCCGTCGCTTCC
CAGGGCCAATTGTGATGACCACAAACTGCTTGCAAGAACCCAAGCGAGGG
TATCGCGACCGCATTTTCACCATGAACGAAGTTGGGTGGGAAGGAATCCC
AACTGTGGAAAACCGCGACTTTTCAAAAGTGATTGCGTTGGCGCAAGAAT
TGGATGGATTTGCAGTGACGGAAGAACCCAACATGATCATGGGTGGATTT
GGCCATGAAGCAATCCTTAGTGTTGCGGACAAGGTGCTTGAAGCAGCTCA
GGGTGGATCTTTGGAGCGAATTGTCCTTATTGGCGGTTGTGATGGCTCTG
AAGGTGATCGATCCTACTTTACAGATTTGGCACAAGAACTGCCAGATTCT
GCTGTCATGTTGACTCTTGGTTGCGCAAAGTACCGTCTTCTTGGAAAGCA
AGACTATGGGGTGCTTCCAGGAACAGAAATCCCACGTCTTCTTGACATGG
GTCAATGCAATGATGCATATGGTGCAGTGGTTGTGGCGCAGAAGTTGGCA
GAAGCATTGAACACAGATATCAACTCTCTCCCTCTGTCTTTGGAGCTCTC
GTGGCTTGAACAAAAGGCAGTCGCTGTCCTTCTCTCTCTTCTTCATCTTG
GAGTCAAAGACATTCGTCTTGGACCAAACCCACCAGCCTTTGTCACACCA
AACATGCTCAACACACTTGTGGATGGATTCAACCTCCAAATCATTGACAC
TTCCAATGCCAAGGGATCTGTTGACCACGTCATGGGACGTGCATGA
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