mRNA_M-pyrifera_M_contig83699.19546.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83699.19546.1
Unique NamemRNA_M-pyrifera_M_contig83699.19546.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Match: A0A1E5QNH4_9CYAN (AB hydrolase-1 domain-containing protein n=2 Tax=unclassified Desertifilum TaxID=2621682 RepID=A0A1E5QNH4_9CYAN)

HSP 1 Score: 201 bits (512), Expect = 2.080e-60
Identity = 109/261 (41.76%), Postives = 159/261 (60.92%), Query Frame = 1
Query:    1 DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPRDMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTRLRGIAPDQILPQQKDWPELQARLARCGVNVQ-QDEPEIGMLLLEGIAEPRWAAARQRLASQGLFVPFAAQSGGGNRSATRWRRLLTETTARDNFLNDGGVTPQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPASRAPEFTHLLT 780
            D+V++HGLAA++AFW   + + L   +RVT YDLRGHGYS  PA+GYT +DMA DL  L NHL I  A LVGHS+GG+IAL+ A   P R+ SL +AD+R+  + P Q L       EL+A +     ++  ++E +IG+  LE IA+ RW + R+   S+  ++PF   SGGG R+A +W  LL  TTAR +  N  G++ + I  L+ PL+  YG  S  L + + L+++ P     L+    HF+P ++A  F  +LT
Sbjct:   21 DLVMIHGLAASRAFWYPLIAQQLEQKFRVTFYDLRGHGYSEMPAAGYTSQDMALDLHELLNHLQIHRALLVGHSFGGVIALQYALQHPERVSSLVVADSRISCLQPVQRLKDTDYLSELEAAILAASPDIDWENETQIGLRFLEEIAKERWQSLRRE--SRYGYIPFGG-SGGGTRAAQKWLNLLNTTTARQDLQNTAGLSIEKIRHLSVPLVAVYGARSRCLPTCQALTQILPTCQTHLIPDSSHFYPVTQAATFARILT 278          
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Match: A0A3S0WME3_9GAMM (Alpha/beta hydrolase n=1 Tax=Candidatus Competibacteraceae bacterium TaxID=2053538 RepID=A0A3S0WME3_9GAMM)

HSP 1 Score: 200 bits (508), Expect = 2.490e-59
Identity = 114/266 (42.86%), Postives = 150/266 (56.39%), Query Frame = 1
Query:    1 DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPRDMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTRLRGIAPDQILPQQKDWPELQARLARCGVNVQQDEPEIGMLLLEGIAEPRWAAARQRLASQGLFVPFAAQSGGGNR---SATRWRRLLTETTARDNFLNDGGVTPQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPASRAPEFTHLLTAFL 789
            ++VLVHGLAA+  FW L +V++L+    +T+YDLRGHG S  P +GYT   MA DL  L +HL +E  HL+GHS+GG IAL  A+  P+R+RS+ LADTRLR + P   L    DWP  Q  L R G+ +  D PE G  LL  +A+     A+    +  L +P  A   GG R   +A RW RL   T+ R + L D G+ P  + ++  P+L  YGEHSP + + R L  L PH    LV   GHF P SR     H    FL
Sbjct:   27 ELVLVHGLAASLGFWPLSVVRSLSWLCALTAYDLRGHGRSDMPITGYTIPRMADDLIELLDHLGLERVHLLGHSFGGAIALYCASRHPQRVRSVILADTRLRALQPYHRLRDWNDWPRWQPLLRRAGIELNADAPEGGYALLTAMAQ-----AQTDPNAPALPIPLFATPAGGKRRNGTAQRWLRLQEATSIRHDLLQDDGLGPAVLRAIRAPVLGLYGEHSPVMPTARTLRRLCPHYELHLVRQAGHFFPLSRPRRLAHASLRFL 287          
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Match: A0A1Q7RNY2_9BACT (AB hydrolase-1 domain-containing protein n=2 Tax=unclassified Acidobacteria TaxID=305072 RepID=A0A1Q7RNY2_9BACT)

HSP 1 Score: 197 bits (501), Expect = 1.370e-58
Identity = 114/263 (43.35%), Postives = 150/263 (57.03%), Query Frame = 1
Query:    1 DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPRDMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTRLRGIAPDQILPQQKDWPELQARLARCGVNVQQDEPEIGMLLLEGIAEPRWAAARQRLASQGLFVPFAAQSGGGNRSATRWRRLLTETTARDNFLNDGGVTPQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPASRAPEFTHLLTAFL 789
            D+VLVHG+AAN AFW   +  ALA  +RVT YDLRGHG SA P +GYTP DMA DL  L +HL IE A LVGHS+GG + L  AT  P R+RSLTLAD  +  +        +  W   + +L   G+ +  + P++   LLE +AEP    ARQ+      FVPF   +G   R+A +W +LL  T A  + +  GG T +AI  +  P LL +GE S  L + + L+E  P++   +V G GHF P  R   F   L AFL
Sbjct:   21 DLVLVHGVAANLAFWFPRIAPALARRHRVTVYDLRGHGLSAMPPAGYTPADMAGDLGALLDHLGIERADLVGHSFGGTVCLEYATSHPGRVRSLTLADVTVNALQSIDSGQDRAYWTTWREQLGSMGITIPSELPKMTYGLLEELAEPDRLEARQKKHPGEFFVPFGRWNGA-RRTARKWLQLLRTTEAWKD-MQSGGPTREAIRGIGHPTLLIFGERSRWLRTCQLLAETLPNAETVIVPGAGHFFPLLRPLVFAGHLGAFL 281          
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Match: A0A1Q7HWI7_9BACT (AB hydrolase-1 domain-containing protein n=1 Tax=Acidobacteria bacterium 13_1_40CM_4_69_4 TaxID=1803457 RepID=A0A1Q7HWI7_9BACT)

HSP 1 Score: 194 bits (493), Expect = 2.180e-57
Identity = 120/266 (45.11%), Postives = 149/266 (56.02%), Query Frame = 1
Query:    1 DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPRDMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTR---LRGIAPDQILPQQKDWPELQARLARCGVNVQQDEPEIGMLLLEGIAEPRWAAARQRLASQGLFVPFAAQSGGGNRSATRWRRLLTETTARDNFLNDGGVTPQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPASRAPEFTHLLTAFL 789
            D+VLVHG+AAN AFW   +  ALA   RVT YDLRGHG SA P  GYTP DMA DL GL +HL IE A LVGHS+GG I L  A   P R+RSLTLAD     L+ I   Q     K W E   +L   G+ V  + P++   LLE +A+PR  AARQ+      FVPF   +G   R+A +W +LL  T A    +  GG T + I  +  P LL +GE S  L +   L+E  P++   +V G GHF P  +   F   L AFL
Sbjct:   21 DLVLVHGIAANLAFWFPRIAPALAQRRRVTVYDLRGHGLSAMPPVGYTPADMAEDLGGLMDHLGIERADLVGHSFGGTICLEYAARHPDRVRSLTLADVTVNALQSIDSGQDWAYWKTWRE---QLESVGITVPAELPKVTFGLLEELADPRRLAARQKKHPGEFFVPFGRWNGA-RRTARKWLKLLRTTQAWKE-MQSGGPTLEEIRRIGHPCLLIFGERSRWLRTCEVLAETLPNADTVIVQGAGHFFPLLKPLVFAGHLGAFL 281          
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Match: A0A7C6VY35_9GAMM (Alpha/beta hydrolase n=1 Tax=Xanthomonadaceae bacterium TaxID=1926873 RepID=A0A7C6VY35_9GAMM)

HSP 1 Score: 194 bits (494), Expect = 2.570e-57
Identity = 111/263 (42.21%), Postives = 147/263 (55.89%), Query Frame = 1
Query:    1 DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPRDMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTRLRGIAPDQILPQQKDWPELQARLARCGVNVQQDEPEIGMLLLEGIAEPRWAAARQRLASQGLFVPFAAQSGGGNRSATRWRRLLTETTARDNFLNDGGVTPQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPASRAPEFTHLLTAFL 789
            D+VL+HGLAA+  FW L +V+ L+   R+T+YDLRGHG S  PA+GY+   MA DL  L + L +E  HL+GHS+GG IAL  A+  P R+RS+ LAD RLR + P   L    DWP  Q  L R G+ + + EPE G  LL  +A    A +R+  A      P +A    GN +A RW RL   T+ R +     G+TP  + ++  P+L  YGE+SP L + R L  L PH    LV   GHF P +R     H    FL
Sbjct:   27 DLVLIHGLAASLGFWQLGIVRPLSWLCRLTTYDLRGHGRSEIPATGYSIPQMADDLAALLDQLGLERVHLLGHSFGGAIALLFASRHPERVRSVILADARLRALQPYHRLRDWNDWPRWQPILRRAGIELNESEPEGGYELLVAMAR---AQSRETSALALPLFPPSAAGVRGNGTAQRWLRLQEATSIRQDLRLPDGLTPAVLRAIRPPVLGLYGENSPVLPTGRALRRLCPHYDLQLVRNAGHFFPLTRPRRLAHASLRFL 286          
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Match: A0A2E3NSL7_9GAMM (Alpha/beta hydrolase n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A2E3NSL7_9GAMM)

HSP 1 Score: 191 bits (486), Expect = 2.750e-56
Identity = 112/267 (41.95%), Postives = 149/267 (55.81%), Query Frame = 1
Query:    1 DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPRDMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTRLRGIAPDQILPQQKDWPELQARLARCGVNVQQD-EPEIGMLLLEGIAEPRWAAARQRLASQGLFVPFAAQSGGGNRSATRWRRLLTETTARDNFLNDGGVTPQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPASRAPEFT-HLLTAFLGQ 795
            D++ VHGLAAN+AFW   L   L   +R+T YDLRGHGYSA P +GY+  + A DL  L +HL I+ A +V HS+GG +AL  A   P R+  L L D ++  + P   L         +  L     ++  + E +IG+  LE +AE R A  + ++ +   FVPFA Q G G R A  W +LL ETTA+  FL+  G +P+ IA LT P+LL YGE+S    S  +L EL PH     V   GHF PA RAP      L  FLG+
Sbjct:   18 DLIFVHGLAANRAFWFTGLAPLLRDHFRLTLYDLRGHGYSATPETGYSSSNQADDLAALLDHLGIDKAPIVAHSFGGAVALEFAVKHPNRVTQLALLDAKINRLQPTLKLSDCAHLTPFEQELVAEATDIDWEAEDQIGLKFLEAVAERRLAGIQTQVKND--FVPFADQRGSG-RDAKHWLKLLHETTAKAEFLSTSGASPEQIAELTMPVLLMYGEYSRVRKSGDRLRELLPHCTYECVPNAGHFFPA-RAPRVVLQSLKPFLGE 280          
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Match: A0A850SRA8_9PROT (Alpha/beta hydrolase n=1 Tax=Parvularculaceae bacterium TaxID=2510335 RepID=A0A850SRA8_9PROT)

HSP 1 Score: 191 bits (484), Expect = 7.060e-56
Identity = 113/268 (42.16%), Postives = 142/268 (52.99%), Query Frame = 1
Query:    1 DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPRDMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTRLRGIAPDQILPQQKDWPELQARLARCGVNVQQDEPEIGMLLLEGIAEPRWAAARQRLASQGLFVPFAAQSGG-----GNRSATRWRRLLTETTARDNFLNDGGVTPQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPASRAPEFTHLLTAFL 789
            +VVLVHGLA N AFW   + KALA   RVT  DLRGHG S  P  GYT  DMA DL+G+F+ L IE AHL+GHSYGGL+A   A   P  + SL LAD RL  + P   L          ARLA  G+ +  D P+ G+ +L        A AR RL ++G         GG     G R A +W RLL  TTAR +F +   +TP  + +L  P+   YG++SP L+S   L+   P      +   GHF PASR  +F      FL
Sbjct:   30 NVVLVHGLATNMAFWYFGVAKALAQFCRVTVIDLRGHGMSTMPKDGYTADDMAEDLRGVFSCLQIERAHLIGHSYGGLVAAAFAARNPSSVGSLVLADVRLPSVQPQLRLGGSPMARAFAARLANAGIEIDPDTPDFGIEMLT-------ALARMRLRNEGDVDKLEGVLGGAKRVMGPRVAAKWLRLLETTTARRDFAHGSALTPHELRALNAPIYAVYGDNSPALSSGMALAGALPGCRLETIPKAGHFFPASRPRDFAFRSLKFL 290          
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Match: A0A383XQ12_9GAMM (Alpha/beta hydrolase n=2 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A383XQ12_9GAMM)

HSP 1 Score: 189 bits (479), Expect = 3.170e-55
Identity = 113/266 (42.48%), Postives = 146/266 (54.89%), Query Frame = 1
Query:    1 DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPRDMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTRLRGIAPDQILPQQKDWPELQARLARCGVNVQ-QDEPEIGMLLLEGIAEPRWAAARQRLASQGLFVPFAAQSGGGNRSATRWRRLLTETTARDNFLNDGGVTPQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPASRAPEFT-HLLTAFLG 792
            D+++VHGLAAN+AFW   L   L   +R+T YDLRGHGYSA P SGY+    A DL  L +HL I+ A +V HS+GG +AL  A   P R+  L L D ++  + P   L         +  L      +    E +IG+  LE +AE R A    R+ +   FVPFA + G G R A  W RLL ETTAR+ F++  G  P+AIA L+ P+LL YGEHS    S  +L EL P +    V   GHF PA RAP    + L   LG
Sbjct:   21 DLIMVHGLAANRAFWFTGLAPMLRDRFRLTLYDLRGHGYSATPPSGYSAGQQADDLLALMDHLGIDQAPIVAHSFGGAVALEFAVRYPHRVSKLALLDAKINCLQPTLRLADCAHLTPFEQELIGDVTEIDWAAEQQIGIRFLETVAERRVAGIHSRVTND--FVPFADRRGNG-RDARHWLRLLRETTAREEFVSTDGAAPEAIAGLSMPVLLMYGEHSRVRPSGERLHELLPAARYVTVPNAGHFFPA-RAPRVVLNALAPLLG 282          
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Match: UPI00197EA8E8 (alpha/beta hydrolase n=1 Tax=Nostoc sp. UHCC 0702 TaxID=2814655 RepID=UPI00197EA8E8)

HSP 1 Score: 182 bits (463), Expect = 6.000e-53
Identity = 103/263 (39.16%), Postives = 135/263 (51.33%), Query Frame = 1
Query:    1 DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPRDMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTRLRGIAPDQILPQQKDWPELQARLARCGVNVQQDEPEIGMLLLEGIAEPRWAAARQRLASQGLFVPFAAQSGGGNRSATRWRRLLTETTARDNFLNDGGVTPQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPASRAPEFTHLLTAFL 789
            D++L+HGL AN AFW + +   LA  YRV  YDLRGHG S+ P +GYT   M  DLQ L  HL ++ AH+VGHS+GG +AL  A   P ++ +LTLADT+   + P   L     W   + R  + G+    D+  IGM LL  +     A A     SQ    PF  Q   GN+   RW +LL  T A         +  + I +LT P L  YGE+S  L    KL ++ PH    +V   GHFHPA +   F   L  FL
Sbjct:   22 DLILIHGLGANLAFWYMRIASVLAQHYRVIIYDLRGHGESSMPIAGYTLSHMTQDLQALMEHLQVKGAHVVGHSFGGTVALHYALSYPNKVATLTLADTQFSCLQPKVRLGDWPYWGIWKQRFIKQGITPPTDDEFIGMRLLS-LLNQLSAKASYTDKSQTTRKPFLRQFNMGNKGTERWEKLLNATLAEKELDESEQINLEQIQNLTLPTLAIYGEYSYCLPCCEKLKDIIPHCQTVIVPEVGHFHPAVKPDFFVENLQQFL 283          
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Match: UPI001CA6DCFB (alpha/beta hydrolase n=1 Tax=Algiphilus sp. NNCM1 TaxID=2834409 RepID=UPI001CA6DCFB)

HSP 1 Score: 182 bits (461), Expect = 1.040e-52
Identity = 106/263 (40.30%), Postives = 141/263 (53.61%), Query Frame = 1
Query:    1 DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPRDMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTRLRGIAPDQILPQQKDWPELQARLARCGVNVQQDEPEIGMLLLEGIAEPRWAAARQRLASQGLFVPFAAQSGGGNRSATRWRRLLTETTARDNFLNDGGVTPQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPASRAPEFTHLLTAFL 789
            D+VLVHGLA N+AFW   L + L + YRVT +DLRGHGYS  P SGY  RDM  DL  + ++L+++   ++ HSYGG +AL  A     R+R+L L D R+  + P+Q L         +  +AR        EP+IG   LE +A  R A      + +  F PFA    GG R A  + RLL  TTARD+FL  G    Q + SL  P+ L YG HS +L S   L+   P +    ++  GHF P S A E   L+  FL
Sbjct:   21 DIVLVHGLATNRAFWYASLAQQLRTHYRVTLFDLRGHGYSDMPPSGYAARDMGQDLAAVIDNLDLDPLAVIAHSYGGSVALEYAVSPRARLRALVLMDARINSLQPEQWLADAPHLTAFEQEVARADGRDWYQEPQIGFAFLEAMARLRTAGFTP--SQRDPFTPFA-DGKGGKRGAMAFCRLLDRTTARDDFLQRGAEREQ-LQSLDIPVQLLYGAHSRNLPSGEALAACLPDATLQRIAEAGHFFPLSHASEVARLVAEFL 279          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83699.19546.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A1E5QNH4_9CYAN2.080e-6041.76AB hydrolase-1 domain-containing protein n=2 Tax=u... [more]
A0A3S0WME3_9GAMM2.490e-5942.86Alpha/beta hydrolase n=1 Tax=Candidatus Competibac... [more]
A0A1Q7RNY2_9BACT1.370e-5843.35AB hydrolase-1 domain-containing protein n=2 Tax=u... [more]
A0A1Q7HWI7_9BACT2.180e-5745.11AB hydrolase-1 domain-containing protein n=1 Tax=A... [more]
A0A7C6VY35_9GAMM2.570e-5742.21Alpha/beta hydrolase n=1 Tax=Xanthomonadaceae bact... [more]
A0A2E3NSL7_9GAMM2.750e-5641.95Alpha/beta hydrolase n=1 Tax=Xanthomonadales bacte... [more]
A0A850SRA8_9PROT7.060e-5642.16Alpha/beta hydrolase n=1 Tax=Parvularculaceae bact... [more]
A0A383XQ12_9GAMM3.170e-5542.48Alpha/beta hydrolase n=2 Tax=Gammaproteobacteria T... [more]
UPI00197EA8E86.000e-5339.16alpha/beta hydrolase n=1 Tax=Nostoc sp. UHCC 0702 ... [more]
UPI001CA6DCFB1.040e-5240.30alpha/beta hydrolase n=1 Tax=Algiphilus sp. NNCM1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83699contigM-pyrifera_M_contig83699:83..877 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score184.9
Seed ortholog evalue4.9e-44
Seed eggNOG ortholog1122604.JONR01000014_gene231
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Alpha/beta hydrolase family
EggNOG OGs1QVQK@1224,1RZ4K@1236,1X5RK@135614,COG0596@1,COG0596@2
COG Functional cat.S
Best tax levelXanthomonadales
Best eggNOG OGNA|NA|NA
Exons1
Model size795
Cds size795
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816744.7303123-CDS-M-pyrifera_M_contig83699:82..8771622816744.7303123-CDS-M-pyrifera_M_contig83699:82..877Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83699 83..877 -
1692278152.639758-CDS-M-pyrifera_M_contig83699:82..8771692278152.639758-CDS-M-pyrifera_M_contig83699:82..877Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83699 83..877 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83699.19546.1prot_M-pyrifera_M_contig83699.19546.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83699 83..877 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83699.19546.1

>prot_M-pyrifera_M_contig83699.19546.1 ID=prot_M-pyrifera_M_contig83699.19546.1|Name=mRNA_M-pyrifera_M_contig83699.19546.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=265bp
DVVLVHGLAANQAFWNLELVKALASGYRVTSYDLRGHGYSARPASGYTPR
DMASDLQGLFNHLNIEAAHLVGHSYGGLIALRLATDQPRRIRSLTLADTR
LRGIAPDQILPQQKDWPELQARLARCGVNVQQDEPEIGMLLLEGIAEPRW
AAARQRLASQGLFVPFAAQSGGGNRSATRWRRLLTETTARDNFLNDGGVT
PQAIASLTFPLLLAYGEHSPHLASYRKLSELAPHSHAALVSGGGHFHPAS
RAPEFTHLLTAFLGQ
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mRNA from alignment at M-pyrifera_M_contig83699:83..877-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83699.19546.1 ID=mRNA_M-pyrifera_M_contig83699.19546.1|Name=mRNA_M-pyrifera_M_contig83699.19546.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=795bp|location=Sequence derived from alignment at M-pyrifera_M_contig83699:83..877- (Macrocystis pyrifera P11B4 male)
GATGTGGTTCTGGTCCACGGCTTAGCGGCCAATCAGGCTTTTTGGAACCT GGAACTCGTCAAAGCCCTGGCAAGCGGGTATCGGGTCACTTCATACGACC TGCGGGGTCACGGCTATAGTGCTCGCCCAGCCTCAGGCTATACACCCCGC GACATGGCCAGCGATCTCCAGGGACTGTTCAACCACCTCAACATCGAAGC GGCCCATCTTGTCGGGCATAGCTATGGCGGTCTGATTGCATTGCGACTGG CTACCGATCAACCACGGCGAATACGTTCCCTCACCCTGGCCGATACGCGG CTGCGGGGCATCGCACCAGATCAGATTCTGCCACAGCAGAAAGATTGGCC CGAACTCCAAGCCCGCCTGGCGCGATGTGGCGTGAACGTTCAACAAGACG AACCCGAAATCGGCATGCTGCTGCTCGAAGGCATTGCCGAGCCCCGTTGG GCTGCGGCCCGACAACGATTGGCCTCCCAGGGGCTATTCGTCCCGTTTGC GGCTCAATCGGGCGGAGGGAACCGCTCAGCGACCCGTTGGAGACGTCTGC TGACCGAAACCACGGCCCGAGATAATTTTCTGAACGATGGCGGCGTTACC CCGCAAGCCATCGCTAGCTTGACCTTCCCACTGCTTCTCGCCTACGGCGA GCATTCTCCCCATCTTGCCAGCTACCGAAAATTGTCGGAGCTGGCCCCAC ACAGTCACGCAGCATTGGTTTCCGGCGGCGGACACTTTCATCCAGCGAGT CGAGCCCCCGAATTCACCCATCTCTTGACCGCCTTCCTTGGACAA
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83699:83..877-

>mRNA_M-pyrifera_M_contig83699.19546.1 ID=mRNA_M-pyrifera_M_contig83699.19546.1|Name=mRNA_M-pyrifera_M_contig83699.19546.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1590bp|location=Sequence derived from alignment at M-pyrifera_M_contig83699:83..877- (Macrocystis pyrifera P11B4 male)
GATGTGGTTCTGGTCCACGGCTTAGCGGCCAATCAGGCTTTTTGGAACCT
GGAACTCGTCAAAGCCCTGGCAAGCGGGTATCGGGTCACTTCATACGACC
TGCGGGGTCACGGCTATAGTGCTCGCCCAGCCTCAGGCTATACACCCCGC
GACATGGCCAGCGATCTCCAGGGACTGTTCAACCACCTCAACATCGAAGC
GGCCCATCTTGTCGGGCATAGCTATGGCGGTCTGATTGCATTGCGACTGG
CTACCGATCAACCACGGCGAATACGTTCCCTCACCCTGGCCGATACGCGG
CTGCGGGGCATCGCACCAGATCAGATTCTGCCACAGCAGAAAGATTGGCC
CGAACTCCAAGCCCGCCTGGCGCGATGTGGCGTGAACGTTCAACAAGACG
AACCCGAAATCGGCATGCTGCTGCTCGAAGGCATTGCCGAGCCCCGTTGG
GCTGCGGCCCGACAACGATTGGCCTCCCAGGGGCTATTCGTCCCGTTTGC
GGCTCAATCGGGCGGAGGGAACCGCTCAGCGACCCGTTGGAGACGTCTGC
TGACCGAAACCACGGCCCGAGATAATTTTCTGAACGATGGCGGCGTTACC
CCGCAAGCCATCGCTAGCTTGACCTTCCCACTGCTTCTCGCCTACGGCGA
GCATTCTCCCCATCTTGCCAGCTACCGAAAATTGTCGGAGCTGGCCCCAC
ACAGTCACGCAGCATTGGTTTCCGGCGGCGGACACTTTCATCCAGCGAGT
CGAGCCCCCGAATTCACCCATCTCTTGACCGCCTTCCTTGGACAAGATGT
GGTTCTGGTCCACGGCTTAGCGGCCAATCAGGCTTTTTGGAACCTGGAAC
TCGTCAAAGCCCTGGCAAGCGGGTATCGGGTCACTTCATACGACCTGCGG
GGTCACGGCTATAGTGCTCGCCCAGCCTCAGGCTATACACCCCGCGACAT
GGCCAGCGATCTCCAGGGACTGTTCAACCACCTCAACATCGAAGCGGCCC
ATCTTGTCGGGCATAGCTATGGCGGTCTGATTGCATTGCGACTGGCTACC
GATCAACCACGGCGAATACGTTCCCTCACCCTGGCCGATACGCGGCTGCG
GGGCATCGCACCAGATCAGATTCTGCCACAGCAGAAAGATTGGCCCGAAC
TCCAAGCCCGCCTGGCGCGATGTGGCGTGAACGTTCAACAAGACGAACCC
GAAATCGGCATGCTGCTGCTCGAAGGCATTGCCGAGCCCCGTTGGGCTGC
GGCCCGACAACGATTGGCCTCCCAGGGGCTATTCGTCCCGTTTGCGGCTC
AATCGGGCGGAGGGAACCGCTCAGCGACCCGTTGGAGACGTCTGCTGACC
GAAACCACGGCCCGAGATAATTTTCTGAACGATGGCGGCGTTACCCCGCA
AGCCATCGCTAGCTTGACCTTCCCACTGCTTCTCGCCTACGGCGAGCATT
CTCCCCATCTTGCCAGCTACCGAAAATTGTCGGAGCTGGCCCCACACAGT
CACGCAGCATTGGTTTCCGGCGGCGGACACTTTCATCCAGCGAGTCGAGC
CCCCGAATTCACCCATCTCTTGACCGCCTTCCTTGGACAA
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