mRNA_M-pyrifera_M_contig83498.19506.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83498.19506.1
Unique NamemRNA_M-pyrifera_M_contig83498.19506.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Match: A0A067D610_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067D610_SAPPC)

HSP 1 Score: 136 bits (343), Expect = 1.560e-37
Identity = 69/135 (51.11%), Postives = 92/135 (68.15%), Query Frame = 1
Query:   22 VLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVPNYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCARGVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSFI 426
            VL  +YLG R  AKD+  L KLG+  ++N TP RSVD VAGVPN+FE+D    Y RCA+YDN   D+L+ ++ C+ F+   + YG VLVHC +GVSRSA+IV AY++  K LS  EA+  V+  R  A+PN SF+
Sbjct:    9 VLDHVYLGSRSHAKDRDTLLKLGITHILNVTPARSVDPVAGVPNFFENDTRFTYRRCALYDNKGEDILTSIEGCLAFLDQAQFYGKVLVHCKQGVSRSASIVVAYVMRTKELSRDEALAFVQARRPEAQPNGSFL 143          
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Match: D7G0E2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G0E2_ECTSI)

HSP 1 Score: 139 bits (349), Expect = 8.030e-37
Identity = 70/140 (50.00%), Postives = 96/140 (68.57%), Query Frame = 1
Query:    7 KHCSRVLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVPNYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCARGVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSFI 426
            K  SRVL  LY+G R  AK++ LL++LG+ RV+N TP R++D   GVPN+FE D A+ Y R AV+DN   DLL HL+ C+ FI  G  YG VLVHC +GVSRS+T+VAAYL+  + LS + A+  ++  RS+  P+  F+
Sbjct:    9 KRPSRVLDHLYIGSRVHAKNRGLLKELGINRVLNVTPARTMDPTNGVPNFFEKDRAMTYKRVAVFDNRGEDLLQHLESCISFIEQGSFYGKVLVHCNKGVSRSSTVVAAYLMRTRGLSKTTALTYLRSRRSIVNPHEGFL 148          
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Match: A0A6G0WZN8_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0WZN8_9STRA)

HSP 1 Score: 132 bits (333), Expect = 7.760e-36
Identity = 66/136 (48.53%), Postives = 89/136 (65.44%), Query Frame = 1
Query:   16 SRVLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVPNYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCARGVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSF 423
            S++L +L+LG R  AK++  L+ LG+  ++N TPPR VD VAGVPN+FE D    Y RC +YDN   ++L+ LD C  FI   + YG +LVHC  GVSRSA+IV AYL+    L+  EA+  V+  R +A PN SF
Sbjct:    7 SQILDYLFLGGRHHAKNRDQLKALGITHILNVTPPRKVDPVAGVPNFFEKDPTFTYRRCTLYDNQGENILASLDGCFAFIDQAKFYGRILVHCKAGVSRSASIVIAYLMKTNQLTFKEALAAVQAKRPMANPNASF 142          
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Match: T0QIZ1_SAPDV (Uncharacterized protein n=2 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0QIZ1_SAPDV)

HSP 1 Score: 135 bits (340), Expect = 1.130e-35
Identity = 68/135 (50.37%), Postives = 92/135 (68.15%), Query Frame = 1
Query:   22 VLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVPNYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCARGVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSFI 426
            VL  +YLG R  AKD+  L KLG+  ++N TP RSVD VAGVPN+FE+D    Y RCA+YDN   D+L+ ++ C+ F+   + YG VLVHC +GVSRSA+IV AY++  K LS  +A+  V+  R  A+PN SF+
Sbjct:  146 VLDHVYLGSRSHAKDRDTLLKLGITHILNVTPARSVDPVAGVPNFFENDTRFTYRRCALYDNKGEDILTSIEGCLAFLDQAQFYGKVLVHCKQGVSRSASIVVAYVMRTKELSRDDALTFVQARRPEAQPNGSFL 280          
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Match: K3WZQ8_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WZQ8_GLOUD)

HSP 1 Score: 134 bits (337), Expect = 2.300e-35
Identity = 62/134 (46.27%), Postives = 91/134 (67.91%), Query Frame = 1
Query:   22 VLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVPNYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCARGVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSF 423
            +L  L+LG R  A+D++LLR+L +  ++N TPPR+ D  AGVPN+FE D +  Y RC ++DN   D+L  L+ C+ F+   ++YG +LVHC +GVSRS ++V AYL+  K +S  +A+  V   RS+A PNPSF
Sbjct:   10 ILEHLFLGSRAHARDRELLRRLQITHILNVTPPRTTDPAAGVPNFFEKDKSFTYRRCPIFDNKAEDILGVLEGCIAFMDQAKYYGRILVHCNKGVSRSTSMVVAYLMKIKDMSLDDALAFVTKRRSMANPNPSF 143          
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Match: A0A024UKG7_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UKG7_9STRA)

HSP 1 Score: 129 bits (324), Expect = 6.630e-35
Identity = 61/136 (44.85%), Postives = 93/136 (68.38%), Query Frame = 1
Query:   16 SRVLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVPNYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCARGVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSF 423
            ++V+ +++LG R+ AK+++LL  LG+  ++N TP R VD VAGVPN+FE D+A  Y RCA++DN   D+L+ LD C+ FI   + +G +LVHC  GVSRSA IV AYL+   ++  ++A+  ++  R +  PN SF
Sbjct:    7 TKVMDYVFLGGRQQAKNRELLESLGITHILNVTPTRKVDPVAGVPNFFEKDNAFTYRRCALFDNQGEDILTSLDGCIAFIDQAKFHGRILVHCKAGVSRSAAIVLAYLMKTLAMPFADALSLLQQKRPMVNPNASF 142          
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Match: A0A8J2T104_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2T104_9STRA)

HSP 1 Score: 130 bits (327), Expect = 1.090e-34
Identity = 67/137 (48.91%), Postives = 91/137 (66.42%), Query Frame = 1
Query:   16 SRVLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVPNYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCARGVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSFI 426
            ++V P LYLGDRK AKD+  LR+LG+  +VN TPP+S D  AG P++FE +  +RYLR  +YD+   D   H    + FI S  HYG VLVHC RGVSRSAT V A+L+  ++L  + A+  V+ AR  A+PN +F+
Sbjct:    4 AQVAPGLYLGDRKDAKDRAALRRLGIQSIVNCTPPKSEDPAAGCPSFFERE--LRYLRVPIYDSPAEDAAEHFAAVLDFIASRLHYGGVLVHCNRGVSRSATFVVAHLMKTRALDPASALELVRAARPQAEPNAAFL 138          
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Match: A0A5D6XQE4_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQE4_9STRA)

HSP 1 Score: 130 bits (328), Expect = 1.260e-34
Identity = 62/136 (45.59%), Postives = 91/136 (66.91%), Query Frame = 1
Query:   16 SRVLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVPNYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCARGVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSF 423
            +RVLP ++LG +  A+D++LL +L +  V+N TPPR+VD VAGVPN+FE D  + Y RC ++DN   DL   L+ CV FI   ++YG +LVHC +GVSRS+++V AYL+ + ++    A+  V   R +  PN SF
Sbjct:    8 ARVLPHVFLGSKAHARDRELLARLQITHVLNVTPPRTVDPVAGVPNFFEKDKTLTYKRCPIFDNKAEDLSGLLEGCVAFIEQAKYYGRILVHCNKGVSRSSSVVVAYLMKSSAMGFERALRFVVDKRPIVNPNASF 143          
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Match: A0A225W435_9STRA (Uncharacterized protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225W435_9STRA)

HSP 1 Score: 129 bits (324), Expect = 2.400e-34
Identity = 59/136 (43.38%), Postives = 93/136 (68.38%), Query Frame = 1
Query:   16 SRVLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVPNYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCARGVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSF 423
            S++L  ++LG R  A+DK+LL++L +  ++N TPP++ D VAGVPN+FE D    Y RC ++DN   D+   L+ C+ F+   ++YG +LVHC +GVSRS+++V AYL+  +S++  +A+  V   RS+A PN SF
Sbjct:    8 SQILEHVFLGSRTHARDKELLQRLRITHILNVTPPKTTDPVAGVPNFFEKDKLFTYRRCPIFDNKAEDITGVLEGCIAFVDQAKYYGRILVHCNKGVSRSSSVVVAYLMKTRSMTFEQALAHVVERRSMANPNESF 143          
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Match: W4H1K2_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H1K2_9STRA)

HSP 1 Score: 127 bits (320), Expect = 2.950e-34
Identity = 61/136 (44.85%), Postives = 91/136 (66.91%), Query Frame = 1
Query:   16 SRVLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVPNYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCARGVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSF 423
            ++VL +++LG R+ AK++ +L  LG+  ++N TP R VD VAGVPN+FE D+   Y RCA++DN   D+L+ LD C+ FI   + +G + VHC  GVSRSA+IV AYL+ A ++   EA+  ++  R +  PN SF
Sbjct:    7 TQVLDYVFLGSRQHAKNRAMLESLGITHILNVTPTRKVDPVAGVPNFFEKDNVFTYRRCALFDNQGEDILTSLDGCIAFIDQAKFHGRIFVHCKAGVSRSASIVLAYLMKANAMPFDEALSFLQHKRPMVNPNASF 142          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83498.19506.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A067D610_SAPPC1.560e-3751.11Uncharacterized protein n=1 Tax=Saprolegnia parasi... [more]
D7G0E2_ECTSI8.030e-3750.00Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6G0WZN8_9STRA7.760e-3648.53Uncharacterized protein n=1 Tax=Aphanomyces euteic... [more]
T0QIZ1_SAPDV1.130e-3550.37Uncharacterized protein n=2 Tax=Saprolegnia diclin... [more]
K3WZQ8_GLOUD2.300e-3546.27Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
A0A024UKG7_9STRA6.630e-3544.85Uncharacterized protein n=1 Tax=Aphanomyces invada... [more]
A0A8J2T104_9STRA1.090e-3448.91Hypothetical protein n=1 Tax=Pelagomonas calceolat... [more]
A0A5D6XQE4_9STRA1.260e-3445.59Uncharacterized protein n=1 Tax=Pythium brassicum ... [more]
A0A225W435_9STRA2.400e-3443.38Uncharacterized protein n=1 Tax=Phytophthora megak... [more]
W4H1K2_9STRA2.950e-3444.85Uncharacterized protein n=2 Tax=Aphanomyces astaci... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83498contigM-pyrifera_M_contig83498:317..889 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score142.1
Seed ortholog evalue2e-31
Seed eggNOG ortholog2880.D7G0E2
Preferred nameDUSP28
KEGG koko:K04459,ko:K14165
KEGG Pathwayko04010,map04010
Hectar predicted targeting categoryother localisation
EggNOG free text desc.phosphatase
EggNOG OGsCOG2453@1,KOG1716@2759
Ec32 ortholog descriptionDual specificity phosphatase, subgroup, catalytic domain
Ec32 orthologEc-02_000740.1
EC3.1.3.16,3.1.3.48
COG Functional cat.T
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko01009
Exons3
Model size426
Cds size426
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83498.19506.1prot_M-pyrifera_M_contig83498.19506.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83498 317..889 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816742.4878886-CDS-M-pyrifera_M_contig83498:316..4951622816742.4878886-CDS-M-pyrifera_M_contig83498:316..495Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83498 317..495 +
1692278151.4489803-CDS-M-pyrifera_M_contig83498:316..4951692278151.4489803-CDS-M-pyrifera_M_contig83498:316..495Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83498 317..495 +
1622816742.499769-CDS-M-pyrifera_M_contig83498:572..6671622816742.499769-CDS-M-pyrifera_M_contig83498:572..667Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83498 573..667 +
1692278151.463396-CDS-M-pyrifera_M_contig83498:572..6671692278151.463396-CDS-M-pyrifera_M_contig83498:572..667Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83498 573..667 +
1622816742.5120275-CDS-M-pyrifera_M_contig83498:737..8891622816742.5120275-CDS-M-pyrifera_M_contig83498:737..889Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83498 738..889 +
1692278151.4767036-CDS-M-pyrifera_M_contig83498:737..8891692278151.4767036-CDS-M-pyrifera_M_contig83498:737..889Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83498 738..889 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83498.19506.1

>prot_M-pyrifera_M_contig83498.19506.1 ID=prot_M-pyrifera_M_contig83498.19506.1|Name=mRNA_M-pyrifera_M_contig83498.19506.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=142bp
MSKHCSRVLPWLYLGDRKAAKDKKLLRKLGVVRVVNATPPRSVDRVAGVP
NYFESDHAIRYLRCAVYDNTTGDLLSHLDKCVRFIVSGRHYGSVLVHCAR
GVSRSATIVAAYLIYAKSLSASEAVHTVKLARSVAKPNPSFI
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mRNA from alignment at M-pyrifera_M_contig83498:317..889+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83498.19506.1 ID=mRNA_M-pyrifera_M_contig83498.19506.1|Name=mRNA_M-pyrifera_M_contig83498.19506.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=573bp|location=Sequence derived from alignment at M-pyrifera_M_contig83498:317..889+ (Macrocystis pyrifera P11B4 male)
ATGAGCAAACACTGCTCCCGCGTGCTGCCTTGGCTGTATCTGGGAGATCG CAAGGCAGCAAAAGACAAGAAGCTTCTTCGCAAGCTTGGGGTTGTGCGGG TGGTGAATGCGACACCACCTAGGTCTGTAGATCGAGTGGCAGGAGTGCCC AACTATTTCGAAAGCGACCATGCCATACGGTGCGTTTCGCTCTGCTGTCA AAGCGACACGCTCCCTGGGATCTCATGATTTTGTGCCACGGCAAGCCACT GCCCAGGTATTTGAGGTGTGCAGTGTACGACAACACGACAGGTGACCTGC TTTCGCACCTGGACAAGTGCGTGCGGTTCATCGTCTCTGGACGCCACTAC GGTCCGTTCTCCGTGCGCTCTTGCTGCCCTCTTCCTTCTACTAACTGTCA CCTTCTGCTGTGACTCCGCAGGCTCTGTGCTTGTGCATTGCGCCAGGGGC GTCAGCCGTTCCGCCACCATCGTCGCTGCGTACCTCATCTACGCAAAATC GCTCAGCGCCAGCGAAGCCGTCCACACTGTCAAGCTCGCGCGCTCCGTGG CAAAGCCCAACCCATCTTTCATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83498:317..889+

>mRNA_M-pyrifera_M_contig83498.19506.1 ID=mRNA_M-pyrifera_M_contig83498.19506.1|Name=mRNA_M-pyrifera_M_contig83498.19506.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=852bp|location=Sequence derived from alignment at M-pyrifera_M_contig83498:317..889+ (Macrocystis pyrifera P11B4 male)
ATGAGCAAACACTGCTCCCGCGTGCTGCCTTGGCTGTATCTGGGAGATCG
CAAGGCAGCAAAAGACAAGAAGCTTCTTCGCAAGCTTGGGGTTGTGCGGG
TGGTGAATGCGACACCACCTAGGTCTGTAGATCGAGTGGCAGGAGTGCCC
AACTATTTCGAAAGCGACCATGCCATACGATGAGCAAACACTGCTCCCGC
GTGCTGCCTTGGCTGTATCTGGGAGATCGCAAGGCAGCAAAAGACAAGAA
GCTTCTTCGCAAGCTTGGGGTTGTGCGGGTGGTGAATGCGACACCACCTA
GGTCTGTAGATCGAGTGGCAGGAGTGCCCAACTATTTCGAAAGCGACCAT
GCCATACGGTATTTGAGGTGTGCAGTGTACGACAACACGACAGGTGACCT
GCTTTCGCACCTGGACAAGTGCGTGCGGTTCATCGTCTCTGGACGCCACT
ACGGTATTTGAGGTGTGCAGTGTACGACAACACGACAGGTGACCTGCTTT
CGCACCTGGACAAGTGCGTGCGGTTCATCGTCTCTGGACGCCACTACGGC
TCTGTGCTTGTGCATTGCGCCAGGGGCGTCAGCCGTTCCGCCACCATCGT
CGCTGCGTACCTCATCTACGCAAAATCGCTCAGCGCCAGCGAAGCCGTCC
ACACTGTCAAGCTCGCGCGCTCCGTGGCAAAGCCCAACCCATCTTTCATC
GCTCTGTGCTTGTGCATTGCGCCAGGGGCGTCAGCCGTTCCGCCACCATC
GTCGCTGCGTACCTCATCTACGCAAAATCGCTCAGCGCCAGCGAAGCCGT
CCACACTGTCAAGCTCGCGCGCTCCGTGGCAAAGCCCAACCCATCTTTCA
TC
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