mRNA_M-pyrifera_M_contig83494.19503.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83494.19503.1
Unique NamemRNA_M-pyrifera_M_contig83494.19503.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Match: A0A3N5Q7E0_9GAMM (YkuD domain-containing protein (Fragment) n=1 Tax=Xanthomonadales bacterium TaxID=2006849 RepID=A0A3N5Q7E0_9GAMM)

HSP 1 Score: 364 bits (935), Expect = 1.190e-123
Identity = 181/292 (61.99%), Postives = 221/292 (75.68%), Query Frame = 1
Query:    1 DPDAPRLAPLGTRYFAAVAPTAEVLGTTQVLFARHENTFSELARRHNLGYQELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGTREGP----GPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRAEHAELGDPLPSVVPAGPDNPLGRHMLQLALPGYLIHGTNKPAGVGLRVSHGCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAEDERDLADEAERVIAAALARAGRETAK--IDPAVVTRVVT 858
            DP APRLAPL TR+F  +AP   ++G TQVLFARHENTFS + R++NLGY+E+R ANP VD WLPG G+P++LPT +++P+ PR GIVIN+P+MRL Y T E P    GP+V L V+++P+GIG EGWATP G  KV++K  DP WY P S+R EHAE GDPLP +VP GPDNPLG+  + L LPGYLIHGTNKPAGVG+R SHGCIR+YPEDIE LF RV R T VR+VNQP LA W DG+LYLEVH PLAE+  DL  EA+  ++ AL RAG   A   ID A + ++VT
Sbjct:   19 DPAAPRLAPLETRHFE-LAPQQALVGETQVLFARHENTFSAIGRQYNLGYEEMRRANPGVDQWLPGEGTPIYLPTQTILPETPRTGIVINVPAMRLFYFTTEKPAAAGGPEV-LKVATHPVGIGTEGWATPFGEAKVVEKARDPTWYVPASVRKEHAERGDPLPRIVPPGPDNPLGKFAMTLTLPGYLIHGTNKPAGVGMRSSHGCIRLYPEDIEALFGRVARGTAVRLVNQPVLAAWHDGQLYLEVHPPLAEETHDLVAEADAALSRALERAGAGAAAVVIDRAAIEKIVT 308          
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Match: A0A7C2JTX3_9GAMM (L,D-transpeptidase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A7C2JTX3_9GAMM)

HSP 1 Score: 362 bits (929), Expect = 1.510e-122
Identity = 175/278 (62.95%), Postives = 216/278 (77.70%), Query Frame = 1
Query:   67 EVLGTTQVLFARHENTFSELARRHNLGYQELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGTREGP---GPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRAEHAELGDPLPSVVPAGPDNPLGRHMLQLALPGYLIHGTNKPAGVGLRVSHGCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAEDERDLADEAERVIAAALARAGRETA--KIDPAVVTRVVTERRGIPFPI 885
            E++G TQ++FAR+ENTFS + R +NLGY+E+R ANP VD WLPG G+P++LPT +++P+APR+GIV+N+P+MRL Y  +E P   G    L VSS+PIGIG +GWATP G  KV++K  DP WY P SIR EHAE GDPLPSVVP GPDNPLG   + L++PGYLIHGTNKPAGVG+R SHGCIR+YPEDIE LF RV R T VR+VNQP LAGW DG+LYLEVH PLAE+E DL  EA+  +  ALARAG   A  +ID A + ++VTE+RGIP P+
Sbjct:    3 ELIGETQIIFARYENTFSAIERVYNLGYEEMRRANPGVDQWLPGEGTPIYLPTQTILPEAPREGIVVNVPAMRLFYFKQEKPKEAGAPPALKVSSHPIGIGVQGWATPFGEAKVVEKARDPVWYVPASIRKEHAERGDPLPSVVPPGPDNPLGAFAMTLSMPGYLIHGTNKPAGVGMRSSHGCIRLYPEDIEALFPRVARGTSVRLVNQPVLAGWHDGQLYLEVHPPLAEEEHDLVAEADAALNRALARAGTAAAAVQIDRAAIEKIVTEQRGIPLPV 280          
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Match: A0A3M1S264_9GAMM (YkuD domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M1S264_9GAMM)

HSP 1 Score: 306 bits (785), Expect = 3.640e-100
Identity = 150/271 (55.35%), Postives = 185/271 (68.27%), Query Frame = 1
Query:   67 EVLGTTQVLFARHENTFSELARRHNLGYQELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGTREGPGPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRAEHAELGDPLPSVVPAGPDNPLGRHMLQLALPGYLIHGTNKPAGVGLRVSHGCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAEDERDLADEAERVIAAALARAGRETAKIDPAVVTRVVTERRGIPF 879
            +V+G  Q++  R  +TF E+AR + +GY ELRDANP VDPWLPG G+PV LPT  V+PDAPR+GIV+N+ + RL Y        D P  V +YPIGIGREGW TP+G T V+ K  DP W+ P SIR EHA  GDPLP  VP GPDNPLG ++L L +PGYLIHGTNKPAGVG+RVSHGC+R+YPEDIE+LF R+P  TPVRIV+QP LAGW+  EL +E H PL  D    A      +  ALAR G +   +D   +  V  +  G+P 
Sbjct:   58 DVVGELQLVKTREADTFVEVARSYGIGYDELRDANPGVDPWLPGEGTPVILPTRHVLPDAPREGIVLNIAAKRLFYFPPVDGDADGPRVVETYPIGIGREGWETPVGETTVVSKARDPVWFVPASIRREHAAAGDPLPPQVPPGPDNPLGHYVLGLGMPGYLIHGTNKPAGVGMRVSHGCVRLYPEDIESLFARIPIGTPVRIVDQPWLAGWQGTELLIEAHRPLDGDRAAAAAALRAQLERALARRGLQAGSVDRDAIETVTGQALGLPL 328          
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Match: A0A7C4E7N8_9PROT (Uncharacterized protein n=2 Tax=Betaproteobacteria bacterium TaxID=1891241 RepID=A0A7C4E7N8_9PROT)

HSP 1 Score: 303 bits (776), Expect = 1.590e-99
Identity = 151/286 (52.80%), Postives = 194/286 (67.83%), Query Frame = 1
Query:   31 GTRYFAAVAPTAEVLGTTQVLFARHENTFSELARRHNLGYQELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGTREGPGPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRAEHAELGDPLPSVVPAGPDNPLGRHMLQLALPG-YLIHGTNKPAGVGLRVSHGCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAEDERDLADEAERVIAAALARAGRETAKIDPAVVTRVVTERRGIPFPI 885
            G R  A       ++G+T  + AR+E+T  ++AR H +GY+ +  ANP VD WLPGAG+P+ +PT  ++PDAPR G+V+NLP  RL +     P P  P  VS+YP+ IG   W TPLG T+V+ KV  P+WYPP SIRAEHA  G+ LP+VVP GPDNPLG + L+LA+PG YLIHGTNKP G+G+RV+HGC+R+YPE I  L+  +P  TPVRIV+QP  AGW+DG LYLEVHAPLAE   +    A   + A +A   R  A ID   VTR   ERRG+P P+
Sbjct:   25 GARTLALPPEDEALVGSTTTVSARYEDTLPDIARAHEVGYEAIVAANPGVDRWLPGAGTPIVVPTEHILPDAPRTGVVLNLPEFRLYH--YHAPAPGAPARVSTYPVSIGDVDWRTPLGLTRVVSKVKRPSWYPPASIRAEHARDGNVLPAVVPPGPDNPLGEYALRLAVPGGYLIHGTNKPYGIGMRVTHGCVRLYPEHIARLYRELPVGTPVRIVDQPIKAGWKDGVLYLEVHAPLAESRTESG--ATAAVRAVIAATKRRDAAIDWDAVTRAARERRGVPVPV 306          
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Match: A0A5Q4EY01_9GAMM (Peptigoglycan-binding protein LysM n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A5Q4EY01_9GAMM)

HSP 1 Score: 303 bits (776), Expect = 1.630e-98
Identity = 154/286 (53.85%), Postives = 190/286 (66.43%), Query Frame = 1
Query:   25 PLGTRYFAAVAPTAEVLGTTQVLFARHENTFSELARRHNLGYQELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGTREGPGPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRAEHAELGDPLPSVVPAGPDNPLGRHMLQLALPGYLIHGTNKPAGVGLRVSHGCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAEDERDLADEAERVIAAALARAGRETAKIDPAVVTRVVTERRGIPFP 882
            PL T  F    P   V+G  QVL  R E+TF ++AR +NLG++EL  ANP VDPWLPG G+ V LPT  ++P  PR+GIVIN   MRL Y   E PG D    V ++PIGIGR G ATP G + VI K  DP WYPP S+R EHAE GDPLP++VP GPDNPLGRH+ +L LP YLIHGTN+P GVG+RVS GC+RM+PEDIE L+ R+   TPVR++N+P LA W   +LY++ HAPL ED RD       VI  A+A AG+    +D      ++ E RGI  P
Sbjct:   59 PLDTSRFVVADPAQRVVGELQVLQTRDEDTFVDIARAYNLGFEELVAANPDVDPWLPGEGTAVVLPTRFILPPVPREGIVINNAQMRLFYF--EPPGEDGTQVVYTHPIGIGRLGRATPTGQSTVIDKATDPTWYPPLSVRREHAEQGDPLPAIVPPGPDNPLGRHVFRLGLPSYLIHGTNQPPGVGMRVSAGCVRMFPEDIEALYPRIALGTPVRLINEPVLAAWHGRQLYVDAHAPLEEDARDPEKLLVDVIEQAMAEAGQPLGTVDFRRAASLLAEGRGIALP 342          
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Match: A0A7C5G895_9GAMM (YkuD domain-containing protein n=1 Tax=Chromatiales bacterium TaxID=2026725 RepID=A0A7C5G895_9GAMM)

HSP 1 Score: 297 bits (761), Expect = 6.330e-97
Identity = 151/281 (53.74%), Postives = 194/281 (69.04%), Query Frame = 1
Query:   37 RYFAAVAPTAEVLGTTQVLFARHENTFSELARRHNLGYQELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGTREGPGPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRAEHAELGDPLPSVVPAGPDNPLGRHMLQLALPGYLIHGTNKPAGVGLRVSHGCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAEDERDL-ADEAERVIAAALARAGRETAKIDPAVVTRVVTERRGIP 876
            R F    P   V+G  Q +  R E T  ++ARR+++G++ELR ANP VDPWLPG  + V LPT  V+PDAPR GIV+N+P MRL Y  +   G   P  V +YPI +GR  W TPLG T++++K+ +P+W PPKSIR EHA  GDPLP VVP GPDNPLGR+ L+L LPGYLIHGTNKP G+G++V+HGCIR++PEDIE LF RVP   PVR+V+QP   GWR+GELYLE H PL + +  L   EA RV++ AL   G    ++D ++V R+     GIP
Sbjct:   28 REFLLPPPGEAVVGELQHVATRQEETLLDVARRYHVGFRELRIANPNVDPWLPGERTQVILPTRYVLPDAPRQGIVVNIPEMRLYYYPKPRKGE--PARVITYPISVGRRNWHTPLGLTRIVRKIRNPSWRPPKSIREEHAARGDPLPPVVPPGPDNPLGRYALRLGLPGYLIHGTNKPDGIGMQVTHGCIRLFPEDIEDLFRRVPVNLPVRLVDQPFKGGWRNGELYLEAHPPLDKKDGPLDLTEAVRVVSRALQ--GHPDVEVDWSLVRRLAANPSGIP 304          
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Match: A0A193LIN5_9GAMM (YkuD domain-containing protein n=2 Tax=Woeseia oceani TaxID=1548547 RepID=A0A193LIN5_9GAMM)

HSP 1 Score: 298 bits (764), Expect = 1.450e-96
Identity = 158/295 (53.56%), Postives = 190/295 (64.41%), Query Frame = 1
Query:    1 DPDAPRLAPLGTRYFAAVAPTAEVLGTTQVLFARHENTFSELARRHNLGYQELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGTREGPGPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRAEHAELGDPLPSVVPAGPDNPLGRHMLQLALPGYLIHGTNKPAGVGLRVSHGCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAEDERDLADEAERVIAAALARAGRETAKIDP---AVVTRVVTERRGIP 876
            D + P   P+   YF  V     V+G  QV+     +TFS+LAR + LGY E+  ANP VDPW+P  G+PV LPT  V+PD PR G+V+N+ + RL Y      G   P TV +YPIGIGR GW TP GAT V  K  DP WY P S+R EHAE GDPLPS+VP GPDNPLGRH+L+L LPGYLIHGTN+P GVG+RVSHGC+RMYPE+IETL+E V     V IVNQP L G RDGE Y E H PL EDE    +    ++ AA A    ET  +DP   A +    +E RG+P
Sbjct:   47 DAELPLADPISRNYFQLVDKNQSVIGELQVVRINEGDTFSDLAREYGLGYDEIVTANPTVDPWIPPVGTPVLLPTQYVLPDTPRRGVVLNIATKRLFYFPEAAEGE--PQTVMTYPIGIGRVGWETPTGATTVTAKARDPHWYVPASVRKEHAENGDPLPSIVPPGPDNPLGRHVLKLGLPGYLIHGTNQPYGVGMRVSHGCVRMYPENIETLYELVGLGLQVTIVNQPYLLGKRDGEWYFESHPPLEEDELPADERIAGLLKAAAA--DDETLLVDPELSAHMQAAASEARGVP 337          
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Match: A0A0S8FBK2_9GAMM (YkuD domain-containing protein n=1 Tax=Gammaproteobacteria bacterium SG8_31 TaxID=1703405 RepID=A0A0S8FBK2_9GAMM)

HSP 1 Score: 296 bits (758), Expect = 3.110e-96
Identity = 155/295 (52.54%), Postives = 195/295 (66.10%), Query Frame = 1
Query:   19 LAPLGTRYFAAVAPTAEVLGTTQVLFARHENTFSELARRHNLGYQELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGTREGPGPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRAEHAELGDPLPSVVPAGPDNPLGRHMLQLALPGYLIHGTNKPAGVGLRVSHGCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAEDERD------LADEAERVIAAALARAGRETAKIDPAVVTRVVTERRGIPFPI 885
            +AP+    F   A   +VLG  Q + ARHE+T  +L R  NLGY+E+  ANP VDPWLPG G+ + LPT+ V+P+APRDG+V+N+  MRL Y T   P  +    + ++PIGIGR GW+TPLG T++  +  DP+WY P+SIR EHA+ GDPLP VVP GPDNPLGRH+L+LALP YLIHGTNKP GVG+RVSHGCIR+YPEDIE L+  VP   PV I++QP LAGW DG L    + PL E+  D      L D+  R      A  G  TA ID   V R+  E  G+ FP+
Sbjct:   28 VAPMAPHEFQVPAEQ-QVLGALQRIQARHEDTLPDLGRLFNLGYEEITRANPGVDPWLPGDGAELVLPTLFVLPEAPRDGLVLNMAGMRLYYFT--APDDNGIRKIFTHPIGIGRVGWSTPLGTTRITARAKDPSWYVPESIREEHAKEGDPLPPVVPPGPDNPLGRHVLRLALPSYLIHGTNKPWGVGMRVSHGCIRLYPEDIEALYSMVPTGAPVHIIDQPYLAGWHDGRLMFTAYKPLEENGGDWLAALELLDQRFRE-----APEGASTAAIDWGRVARITRESMGVAFPV 314          
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Match: A0A523LPK9_9GAMM (Peptigoglycan-binding protein LysM n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A523LPK9_9GAMM)

HSP 1 Score: 296 bits (757), Expect = 1.990e-95
Identity = 139/246 (56.50%), Postives = 176/246 (71.54%), Query Frame = 1
Query:   16 RLAPLGTRYFAAVAPTAEVLGTTQVLFARHENTFSELARRHNLGYQELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGTREGPGPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRAEHAELGDPLPSVVPAGPDNPLGRHMLQLALPGYLIHGTNKPAGVGLRVSHGCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAEDE 753
            RL P+   +F   AP   V+G  Q+++   ENTFS+LAR + LGY E+  ANP +DPWLPG  +PV LPT  V+PD PR G+V+N+ S RL Y      G   P+ V +YPIGIGR GW TPLG ++V+ K  DP+WY P S+R E AE G+PLP+VVP GPDNPLG  +L+L +PGYLIHGTN+P GVG+RVSHGCIR+YPE+IE L+  V    PV I+N+P LAGWRDGELY E H+PL +D+
Sbjct:   54 RLEPISRNFFILDAPDQSVIGEPQIVYTTQENTFSDLAREYGLGYDEIVAANPGIDPWLPGVETPVLLPTQYVLPDVPRRGLVLNIASKRLFYFPEVAAGE--PVQVLTYPIGIGRVGWETPLGKSEVVAKARDPSWYVPASVRRERAESGNPLPAVVPPGPDNPLGHFVLKLDMPGYLIHGTNQPYGVGMRVSHGCIRLYPENIEPLYNMVGIGEPVTIINEPYLAGWRDGELYFESHSPLEDDD 297          
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Match: A0A657Q2P3_9GAMM (L,D-transpeptidase n=1 Tax=Candidatus Sedimenticola endophacoides TaxID=2548426 RepID=A0A657Q2P3_9GAMM)

HSP 1 Score: 292 bits (748), Expect = 2.290e-95
Identity = 144/270 (53.33%), Postives = 181/270 (67.04%), Query Frame = 1
Query:   67 EVLGTTQVLFARHENTFSELARRHNLGYQELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGTREGPGPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRAEHAELGDPLPSVVPAGPDNPLGRHMLQLALPGYLIHGTNKPAGVGLRVSHGCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAEDERDLADEAERVIAAALARAGRETAKIDPAVVTRVVTERRGIP 876
            +++G  +    R+E+T S+LAR H+LGY E+ DANP VDPWLPG G+PV LP   ++P  PRDG+VINL  +RL Y  R G G      V ++P+GIGREGW+TP G  +V  K V+PAW PP+SIR EHA+ GDPLP  +  GPDNPLG H L L+LPGYLIHGTNKP GVG+RVSHGCIR+YPEDI +LF +VP  TPVRI+N+P  AGW  G LY+E H PL+E           ++ A +   G  T + D     R    +RGIP
Sbjct:   32 DLIGAIEETTTRYEDTLSDLARNHDLGYTEITDANPRVDPWLPGEGTPVILPKRFILPPGPRDGLVINLAELRLYYYPR-GEG-----RVITHPLGIGREGWSTPTGRGRVTHKAVNPAWRPPESIRQEHAQTGDPLPEYIAPGPDNPLGSHALYLSLPGYLIHGTNKPYGVGMRVSHGCIRLYPEDIASLFHQVPAGTPVRIINEPYKAGWHQGSLYVEAHPPLSEQLETHGMNLTPMVRAIIEALGESTLRPDWEATRRAALRQRGIP 295          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83494.19503.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3N5Q7E0_9GAMM1.190e-12361.99YkuD domain-containing protein (Fragment) n=1 Tax=... [more]
A0A7C2JTX3_9GAMM1.510e-12262.95L,D-transpeptidase n=1 Tax=Gammaproteobacteria bac... [more]
A0A3M1S264_9GAMM3.640e-10055.35YkuD domain-containing protein n=1 Tax=Gammaproteo... [more]
A0A7C4E7N8_9PROT1.590e-9952.80Uncharacterized protein n=2 Tax=Betaproteobacteria... [more]
A0A5Q4EY01_9GAMM1.630e-9853.85Peptigoglycan-binding protein LysM n=1 Tax=Gammapr... [more]
A0A7C5G895_9GAMM6.330e-9753.74YkuD domain-containing protein n=1 Tax=Chromatiale... [more]
A0A193LIN5_9GAMM1.450e-9653.56YkuD domain-containing protein n=2 Tax=Woeseia oce... [more]
A0A0S8FBK2_9GAMM3.110e-9652.54YkuD domain-containing protein n=1 Tax=Gammaproteo... [more]
A0A523LPK9_9GAMM1.990e-9556.50Peptigoglycan-binding protein LysM n=1 Tax=Gammapr... [more]
A0A657Q2P3_9GAMM2.290e-9553.33L,D-transpeptidase n=1 Tax=Candidatus Sedimenticol... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83494contigM-pyrifera_M_contig83494:2..886 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score296.2
Seed ortholog evalue1.7e-77
Seed eggNOG ortholog1123368.AUIS01000007_gene2702
Preferred nameerfK
KEGG koko:K16291
Hectar predicted targeting categoryother localisation
EggNOG free text desc.L,D-transpeptidase catalytic domain
EggNOG OGs1MVYT@1224,1RMNC@1236,2NCX3@225057,COG1376@1,COG1376@2
COG Functional cat.S
Best tax levelAcidithiobacillales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01002,ko01011
Exons1
Model size885
Cds size885
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816742.3720348-CDS-M-pyrifera_M_contig83494:1..8861622816742.3720348-CDS-M-pyrifera_M_contig83494:1..886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83494 2..886 -
1692278151.3814929-CDS-M-pyrifera_M_contig83494:1..8861692278151.3814929-CDS-M-pyrifera_M_contig83494:1..886Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83494 2..886 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83494.19503.1prot_M-pyrifera_M_contig83494.19503.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83494 2..886 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83494.19503.1

>prot_M-pyrifera_M_contig83494.19503.1 ID=prot_M-pyrifera_M_contig83494.19503.1|Name=mRNA_M-pyrifera_M_contig83494.19503.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=295bp
DPDAPRLAPLGTRYFAAVAPTAEVLGTTQVLFARHENTFSELARRHNLGY
QELRDANPAVDPWLPGAGSPVFLPTMSVMPDAPRDGIVINLPSMRLLYGT
REGPGPDVPLTVSSYPIGIGREGWATPLGATKVIQKVVDPAWYPPKSIRA
EHAELGDPLPSVVPAGPDNPLGRHMLQLALPGYLIHGTNKPAGVGLRVSH
GCIRMYPEDIETLFERVPRQTPVRIVNQPALAGWRDGELYLEVHAPLAED
ERDLADEAERVIAAALARAGRETAKIDPAVVTRVVTERRGIPFPI
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mRNA from alignment at M-pyrifera_M_contig83494:2..886-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83494.19503.1 ID=mRNA_M-pyrifera_M_contig83494.19503.1|Name=mRNA_M-pyrifera_M_contig83494.19503.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=885bp|location=Sequence derived from alignment at M-pyrifera_M_contig83494:2..886- (Macrocystis pyrifera P11B4 male)
GACCCTGACGCGCCACGGCTGGCGCCGCTCGGTACGCGCTACTTCGCCGC GGTCGCACCGACCGCGGAGGTGCTTGGCACAACCCAGGTGCTATTCGCGC GCCACGAGAACACGTTCTCCGAACTCGCCCGCCGGCACAATCTCGGTTAC CAGGAGTTGCGTGACGCGAATCCGGCCGTCGATCCGTGGCTGCCGGGCGC GGGCTCACCCGTTTTTTTGCCGACGATGAGCGTGATGCCGGATGCGCCGC GCGACGGCATCGTGATCAATCTGCCGAGCATGCGCCTGCTGTACGGCACG CGTGAGGGCCCCGGGCCGGATGTCCCGCTGACCGTGTCGAGCTACCCGAT CGGGATCGGCCGTGAAGGCTGGGCGACCCCGCTCGGGGCGACGAAGGTGA TCCAGAAAGTCGTCGATCCGGCCTGGTATCCGCCGAAGTCGATCCGCGCG GAACACGCGGAACTCGGCGATCCGCTGCCGAGCGTCGTGCCGGCCGGCCC GGACAATCCGCTCGGACGTCACATGCTGCAACTCGCGCTACCGGGCTACC TGATCCACGGCACGAACAAGCCCGCGGGGGTTGGCCTGCGCGTGAGCCAC GGCTGCATCCGCATGTACCCGGAAGACATCGAGACCCTGTTCGAACGCGT GCCGCGGCAGACCCCGGTGAGGATCGTGAACCAGCCCGCGCTCGCCGGCT GGCGCGACGGGGAACTGTATCTTGAAGTCCATGCGCCACTCGCGGAAGAC GAACGCGACCTGGCCGACGAGGCCGAACGCGTGATCGCGGCGGCGCTCGC GCGCGCGGGTCGCGAGACGGCGAAAATCGATCCGGCGGTCGTCACCCGGG TCGTTACCGAACGACGCGGCATTCCGTTTCCCATC
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83494:2..886-

>mRNA_M-pyrifera_M_contig83494.19503.1 ID=mRNA_M-pyrifera_M_contig83494.19503.1|Name=mRNA_M-pyrifera_M_contig83494.19503.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1770bp|location=Sequence derived from alignment at M-pyrifera_M_contig83494:2..886- (Macrocystis pyrifera P11B4 male)
GACCCTGACGCGCCACGGCTGGCGCCGCTCGGTACGCGCTACTTCGCCGC
GGTCGCACCGACCGCGGAGGTGCTTGGCACAACCCAGGTGCTATTCGCGC
GCCACGAGAACACGTTCTCCGAACTCGCCCGCCGGCACAATCTCGGTTAC
CAGGAGTTGCGTGACGCGAATCCGGCCGTCGATCCGTGGCTGCCGGGCGC
GGGCTCACCCGTTTTTTTGCCGACGATGAGCGTGATGCCGGATGCGCCGC
GCGACGGCATCGTGATCAATCTGCCGAGCATGCGCCTGCTGTACGGCACG
CGTGAGGGCCCCGGGCCGGATGTCCCGCTGACCGTGTCGAGCTACCCGAT
CGGGATCGGCCGTGAAGGCTGGGCGACCCCGCTCGGGGCGACGAAGGTGA
TCCAGAAAGTCGTCGATCCGGCCTGGTATCCGCCGAAGTCGATCCGCGCG
GAACACGCGGAACTCGGCGATCCGCTGCCGAGCGTCGTGCCGGCCGGCCC
GGACAATCCGCTCGGACGTCACATGCTGCAACTCGCGCTACCGGGCTACC
TGATCCACGGCACGAACAAGCCCGCGGGGGTTGGCCTGCGCGTGAGCCAC
GGCTGCATCCGCATGTACCCGGAAGACATCGAGACCCTGTTCGAACGCGT
GCCGCGGCAGACCCCGGTGAGGATCGTGAACCAGCCCGCGCTCGCCGGCT
GGCGCGACGGGGAACTGTATCTTGAAGTCCATGCGCCACTCGCGGAAGAC
GAACGCGACCTGGCCGACGAGGCCGAACGCGTGATCGCGGCGGCGCTCGC
GCGCGCGGGTCGCGAGACGGCGAAAATCGATCCGGCGGTCGTCACCCGGG
TCGTTACCGAACGACGCGGCATTCCGTTTCCCATCGACCCTGACGCGCCA
CGGCTGGCGCCGCTCGGTACGCGCTACTTCGCCGCGGTCGCACCGACCGC
GGAGGTGCTTGGCACAACCCAGGTGCTATTCGCGCGCCACGAGAACACGT
TCTCCGAACTCGCCCGCCGGCACAATCTCGGTTACCAGGAGTTGCGTGAC
GCGAATCCGGCCGTCGATCCGTGGCTGCCGGGCGCGGGCTCACCCGTTTT
TTTGCCGACGATGAGCGTGATGCCGGATGCGCCGCGCGACGGCATCGTGA
TCAATCTGCCGAGCATGCGCCTGCTGTACGGCACGCGTGAGGGCCCCGGG
CCGGATGTCCCGCTGACCGTGTCGAGCTACCCGATCGGGATCGGCCGTGA
AGGCTGGGCGACCCCGCTCGGGGCGACGAAGGTGATCCAGAAAGTCGTCG
ATCCGGCCTGGTATCCGCCGAAGTCGATCCGCGCGGAACACGCGGAACTC
GGCGATCCGCTGCCGAGCGTCGTGCCGGCCGGCCCGGACAATCCGCTCGG
ACGTCACATGCTGCAACTCGCGCTACCGGGCTACCTGATCCACGGCACGA
ACAAGCCCGCGGGGGTTGGCCTGCGCGTGAGCCACGGCTGCATCCGCATG
TACCCGGAAGACATCGAGACCCTGTTCGAACGCGTGCCGCGGCAGACCCC
GGTGAGGATCGTGAACCAGCCCGCGCTCGCCGGCTGGCGCGACGGGGAAC
TGTATCTTGAAGTCCATGCGCCACTCGCGGAAGACGAACGCGACCTGGCC
GACGAGGCCGAACGCGTGATCGCGGCGGCGCTCGCGCGCGCGGGTCGCGA
GACGGCGAAAATCGATCCGGCGGTCGTCACCCGGGTCGTTACCGAACGAC
GCGGCATTCCGTTTCCCATC
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