mRNA_M-pyrifera_M_contig8346.19491.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig8346.19491.1
Unique NamemRNA_M-pyrifera_M_contig8346.19491.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Match: D8LRT3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRT3_ECTSI)

HSP 1 Score: 227 bits (579), Expect = 7.320e-70
Identity = 121/174 (69.54%), Postives = 126/174 (72.41%), Query Frame = 1
Query:    1 YPHMSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVCFNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVDAYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTSGGGLFAAGSYAKTICLYSANR 522
            YPHMSS+EPATSVFVSTSRDHPLHMWDAFTG LRATYRAYDHLDEVVAANSVCFNT G KIFAG                                           YNRMIR+FDV+QPGRSFEARPTCKTRKSKTGQRGIISALAF P++SGGGLFAAGSYAKTICLYS NR
Sbjct:  139 YPHMSSSEPATSVFVSTSRDHPLHMWDAFTGNLRATYRAYDHLDEVVAANSVCFNTAGGKIFAG-------------------------------------------YNRMIRIFDVSQPGRSFEARPTCKTRKSKTGQRGIISALAFCPESSGGGLFAAGSYAKTICLYSENR 269          
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Match: A0A8K1FL14_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FL14_PYTOL)

HSP 1 Score: 162 bits (410), Expect = 2.370e-43
Identity = 86/170 (50.59%), Postives = 103/170 (60.59%), Query Frame = 1
Query:    1 YPHMSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVCFNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVDAYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTSGGGLFAAGSYAKTICLY 510
            YP+M+S +PAT +F+STSRDHP+HMWDA+TG LRATYRA+DHLDE+ AA SV FN  GDKIFAG                                           Y+RMIR FD+ QP R F +RP CKTRKS+ GQRGIIS L F+PD S   ++AAGSY  T C+Y
Sbjct:  133 YPYMTSQDPATCIFISTSRDHPIHMWDAYTGQLRATYRAFDHLDEITAAFSVAFNATGDKIFAG-------------------------------------------YDRMIRFFDITQPSRDFVSRPLCKTRKSRDGQRGIISTLHFNPDHSK--IYAAGSYNGTTCIY 257          
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Match: K3WVC6_GLOUD (Uncharacterized protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WVC6_GLOUD)

HSP 1 Score: 155 bits (392), Expect = 5.750e-41
Identity = 83/174 (47.70%), Postives = 104/174 (59.77%), Query Frame = 1
Query:    1 YPHMSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVCFNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVDAYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTSGGGLFAAGSYAKTICLYSANR 522
            YP M+S  P + +FVSTSRD P+HMWDA+TG LRATYRAYDHLDE+ AANS+ FNT GDKIF G                                           ++RMIR FD++QP R F+ARP  KTR+S+ GQRGIIS + F+PD S   ++AAGSY  T C+Y+ +R
Sbjct:   95 YPFMNSQVPESCIFVSTSRDQPVHMWDAYTGDLRATYRAYDHLDEIAAANSIAFNTTGDKIFCG-------------------------------------------FDRMIRFFDISQPSRDFKARPLSKTRRSREGQRGIISTIHFNPDHSK--IYAAGSYGGTTCIYTEDR 223          
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Match: UPI0009E37FE3 (telomerase Cajal body protein 1-like isoform X3 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E37FE3)

HSP 1 Score: 154 bits (388), Expect = 2.120e-40
Identity = 99/292 (33.90%), Postives = 132/292 (45.21%), Query Frame = 1
Query:    1 YPHMSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVCFNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVDAYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTSGGGLFAAGSYAKTICLYSANRWADNGQGSHLAAGRRLSLLLLLSHSMNCVAHTQRCGGPRTPVQPAFSVCCNAVLEYPHVSRLACLLHSSRGRAVAELATPTMGGVTHLKFAPDGRLLFSGSRKNDEIVCWDMRRTKEV 876
            YP MSS +P +   +STSRDHP+HMWDAFTG +R TYR Y+HLDE+VAAN V FN +G +I+ G                                           +N+M+RVFD A+PGR F+ RPT      K GQ GIIS++AFS D SG  ++A GSY+K++ +YS      +G+   L  G++                                                                   GGVTH+ F+PDG  L+SG RK+DEI+CWD+R    V
Sbjct:   98 YPFMSSLDPDSCCLLSTSRDHPIHMWDAFTGTIRCTYRTYNHLDELVAANCVSFNLDGSQIYCG-------------------------------------------FNKMVRVFDTARPGRDFQQRPTTV---KKEGQNGIISSIAFSQDNSG--MYALGSYSKSVGVYS----DSDGELIFLLQGQQ-------------------------------------------------------------------GGVTHVMFSPDGTKLYSGGRKDDEIICWDVRNPGTV 270          
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Match: A0A1S4LN18_IXOSC (WD-repeat protein, putative n=2 Tax=Ixodes scapularis TaxID=6945 RepID=A0A1S4LN18_IXOSC)

HSP 1 Score: 151 bits (382), Expect = 4.050e-40
Identity = 98/292 (33.56%), Postives = 131/292 (44.86%), Query Frame = 1
Query:    1 YPHMSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVCFNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVDAYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTSGGGLFAAGSYAKTICLYSANRWADNGQGSHLAAGRRLSLLLLLSHSMNCVAHTQRCGGPRTPVQPAFSVCCNAVLEYPHVSRLACLLHSSRGRAVAELATPTMGGVTHLKFAPDGRLLFSGSRKNDEIVCWDMRRTKEV 876
            YP M+SA+PAT  F STS  +P+H+WDA+TG LR +YR Y+HLDE VAA+S+ F+ +G+K++ G                                           +N+MIRVFDVA PGRSF+ RPT      K GQ GIIS  AF P     G++AAGSY KT+ +YS      +GQ   + +G +                                                                   GGVTHL+F+PDG  L+SG RK+ EI+CWD+R   +V
Sbjct:  140 YPGMTSADPATCCFASTSAGNPIHLWDAYTGQLRCSYRPYNHLDEPVAAHSISFDASGEKLYCG-------------------------------------------FNKMIRVFDVASPGRSFDERPT---NVKKMGQPGIISCFAFGPQ----GIYAAGSYCKTVAMYS----ESDGQLQFMLSGHQ-------------------------------------------------------------------GGVTHLRFSPDGTRLYSGGRKDFEILCWDLRNLGKV 310          
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Match: A0A3F2RXQ4_9STRA (Uncharacterized protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RXQ4_9STRA)

HSP 1 Score: 152 bits (383), Expect = 4.260e-40
Identity = 80/170 (47.06%), Postives = 105/170 (61.76%), Query Frame = 1
Query:    1 YPHMSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVCFNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVDAYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTSGGGLFAAGSYAKTICLY 510
            YP M+SA+PA+ +FVSTSRD P+H+WDA+TGALRA+YRAYDH+DE+ +A S+ FN+ GDK+FAG                                           ++RMIR FD++QP R F ARP  KTR+S+ GQRG+IS L F+PD S   ++AAGSYA T C+Y
Sbjct:  104 YPFMTSADPASCIFVSTSRDQPVHLWDAYTGALRASYRAYDHMDELASAQSLTFNSTGDKLFAG-------------------------------------------FDRMIRFFDLSQPSRDFRARPLSKTRRSRKGQRGLISTLHFNPDHSK--IYAAGSYAGTTCVY 228          
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Match: A0A662X8T5_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662X8T5_9STRA)

HSP 1 Score: 154 bits (388), Expect = 5.350e-40
Identity = 81/170 (47.65%), Postives = 105/170 (61.76%), Query Frame = 1
Query:    1 YPHMSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVCFNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVDAYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTSGGGLFAAGSYAKTICLY 510
            YP MSSA P++ +FVSTSRDHP+H+WDA+TGALRA+YR++DHLDE+ +A SV FN  GDK+FAG                                           ++RMIR FD++QP R F ARP  KTR+S+ GQRG+IS+L F+PD S   ++AAGSYA T C+Y
Sbjct:  134 YPFMSSANPSSCIFVSTSRDHPVHLWDAYTGALRASYRSFDHLDELASAQSVAFNATGDKLFAG-------------------------------------------FDRMIRFFDLSQPSRDFHARPLSKTRRSRKGQRGLISSLHFNPDFSK--IYAAGSYAGTTCVY 258          
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Match: UPI0009E26A2F (telomerase Cajal body protein 1-like isoform X1 n=2 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E26A2F)

HSP 1 Score: 154 bits (388), Expect = 2.650e-39
Identity = 99/292 (33.90%), Postives = 132/292 (45.21%), Query Frame = 1
Query:    1 YPHMSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVCFNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVDAYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTSGGGLFAAGSYAKTICLYSANRWADNGQGSHLAAGRRLSLLLLLSHSMNCVAHTQRCGGPRTPVQPAFSVCCNAVLEYPHVSRLACLLHSSRGRAVAELATPTMGGVTHLKFAPDGRLLFSGSRKNDEIVCWDMRRTKEV 876
            YP MSS +P +   +STSRDHP+HMWDAFTG +R TYR Y+HLDE+VAAN V FN +G +I+ G                                           +N+M+RVFD A+PGR F+ RPT      K GQ GIIS++AFS D SG  ++A GSY+K++ +YS      +G+   L  G++                                                                   GGVTH+ F+PDG  L+SG RK+DEI+CWD+R    V
Sbjct:  250 YPFMSSLDPDSCCLLSTSRDHPIHMWDAFTGTIRCTYRTYNHLDELVAANCVSFNLDGSQIYCG-------------------------------------------FNKMVRVFDTARPGRDFQQRPTTV---KKEGQNGIISSIAFSQDNSG--MYALGSYSKSVGVYS----DSDGELIFLLQGQQ-------------------------------------------------------------------GGVTHVMFSPDGTKLYSGGRKDDEIICWDVRNPGTV 422          
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Match: A0A7S2GDB9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2GDB9_9STRA)

HSP 1 Score: 149 bits (377), Expect = 6.590e-39
Identity = 82/170 (48.24%), Postives = 102/170 (60.00%), Query Frame = 1
Query:    1 YPHMSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVCFNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVDAYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTSGGGLFAAGSYAKTICLY 510
            YPHM S +P T VF STSRDHP+H+WDAFTG +RATYRAYDHLDE VAA S+ F+ +G ++ AG                                           YNR +RVFD+A PGR    RPT  +RK+KTGQRGIISALA +P++S   L+AAGSY+++I LY
Sbjct:   61 YPHMRSDQPVTCVFASTSRDHPIHLWDAFTGTIRATYRAYDHLDENVAAYSMAFSEDGTQLLAG-------------------------------------------YNRCVRVFDLAHPGRPISDRPTSASRKAKTGQRGIISALAVAPESS---LYAAGSYSESIVLY 184          
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Match: D0N4M9_PHYIT (Uncharacterized protein n=1 Tax=Phytophthora infestans (strain T30-4) TaxID=403677 RepID=D0N4M9_PHYIT)

HSP 1 Score: 145 bits (365), Expect = 1.440e-38
Identity = 77/170 (45.29%), Postives = 102/170 (60.00%), Query Frame = 1
Query:    1 YPHMSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVCFNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVDAYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTSGGGLFAAGSYAKTICLY 510
            YP MSSA+P + +FVSTSRD P+H+WDA+TG LRA+YRA+DH+DE+ +A S+ FN+ G K+FAG                                           ++RMIR FD++QP R F ARP  KTR+S+ GQRG+IS L F+PD S   ++AAGSYA T C+Y
Sbjct:   96 YPFMSSADPNSCIFVSTSRDQPVHLWDAYTGELRASYRAFDHMDELASAQSLAFNSTGTKLFAG-------------------------------------------FDRMIRFFDLSQPSRDFRARPLSKTRRSRKGQRGLISTLHFNPDHSK--IYAAGSYAGTTCVY 220          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8346.19491.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRT3_ECTSI7.320e-7069.54Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A8K1FL14_PYTOL2.370e-4350.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
K3WVC6_GLOUD5.750e-4147.70Uncharacterized protein n=1 Tax=Globisporangium ul... [more]
UPI0009E37FE32.120e-4033.90telomerase Cajal body protein 1-like isoform X3 n=... [more]
A0A1S4LN18_IXOSC4.050e-4033.56WD-repeat protein, putative n=2 Tax=Ixodes scapula... [more]
A0A3F2RXQ4_9STRA4.260e-4047.06Uncharacterized protein n=3 Tax=Phytophthora kerno... [more]
A0A662X8T5_9STRA5.350e-4047.65Uncharacterized protein n=2 Tax=Nothophytophthora ... [more]
UPI0009E26A2F2.650e-3933.90telomerase Cajal body protein 1-like isoform X1 n=... [more]
A0A7S2GDB9_9STRA6.590e-3948.24Hypothetical protein (Fragment) n=1 Tax=Dictyocha ... [more]
D0N4M9_PHYIT1.440e-3845.29Uncharacterized protein n=1 Tax=Phytophthora infes... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig8346contigM-pyrifera_M_contig8346:6908..7955 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score223.8
Seed ortholog evalue1e-55
Seed eggNOG ortholog2880.D8LRT3
Preferred nameWRAP53
KEGG koko:K15361,ko:K16745
KEGG Pathwayko03460,map03460
Hectar predicted targeting categoryother localisation
GOsGO:0000723,GO:0003674,GO:0003676,GO:0003723,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005697,GO:0005737,GO:0005829,GO:0005834,GO:0005886,GO:0006139,GO:0006259,GO:0006278,GO:0006403,GO:0006725,GO:0006807,GO:0006996,GO:0006997,GO:0007004,GO:0008104,GO:0008150,GO:0008152,GO:0008277,GO:0009058,GO:0009059,GO:0009889,GO:0009891,GO:0009893,GO:0009898,GO:0009966,GO:0009968,GO:0009987,GO:0010556,GO:0010557,GO:0010604,GO:0010646,GO:0010648,GO:0010833,GO:0010969,GO:0015030,GO:0016020,GO:0016043,GO:0016604,GO:0018130,GO:0019219,GO:0019222,GO:0019438,GO:0019897,GO:0019898,GO:0022607,GO:0023051,GO:0023057,GO:0030515,GO:0030575,GO:0030576,GO:0031137,GO:0031234,GO:0031323,GO:0031325,GO:0031326,GO:0031328,GO:0031974,GO:0031981,GO:0032200,GO:0032202,GO:0032203,GO:0032879,GO:0032880,GO:0032991,GO:0033036,GO:0033365,GO:0034504,GO:0034512,GO:0034613,GO:0034641,GO:0034645,GO:0034654,GO:0042592,GO:0042802,GO:0043085,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043233,GO:0043900,GO:0044085,GO:0044093,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044271,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044459,GO:0044464,GO:0044877,GO:0045744,GO:0045935,GO:0046483,GO:0046999,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048585,GO:0050789,GO:0050790,GO:0050794,GO:0051052,GO:0051054,GO:0051087,GO:0051171,GO:0051173,GO:0051179,GO:0051276,GO:0051338,GO:0051347,GO:0051641,GO:0051972,GO:0051973,GO:0060238,GO:0060240,GO:0060249,GO:0060255,GO:0060341,GO:0065007,GO:0065008,GO:0065009,GO:0070013,GO:0070034,GO:0070201,GO:0070202,GO:0070203,GO:0070727,GO:0071704,GO:0071840,GO:0071897,GO:0071944,GO:0080090,GO:0090029,GO:0090304,GO:0090666,GO:0090670,GO:0090671,GO:0090672,GO:0090685,GO:0097159,GO:0098552,GO:0098562,GO:0098796,GO:0098797,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1902494,GO:1903405,GO:1903827,GO:1903829,GO:1904814,GO:1904816,GO:1904851,GO:1904867,GO:1904951,GO:1905360,GO:1990173,GO:1990904,GO:2000112,GO:2000241,GO:2000242,GO:2000278,GO:2000573
EggNOG free text desc.telomerase RNA localization to Cajal body
EggNOG OGsKOG2919@1,KOG2919@2759
COG Functional cat.BDLTU
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03036,ko03400
Exons3
Model size876
Cds size867
Stop0
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig8346.19491.1prot_M-pyrifera_M_contig8346.19491.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig8346 6917..7955 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816741.6873233-UTR-M-pyrifera_M_contig8346:6907..69161622816741.6873233-UTR-M-pyrifera_M_contig8346:6907..6916Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8346 6908..6916 +
1692278150.9829774-UTR-M-pyrifera_M_contig8346:6907..69161692278150.9829774-UTR-M-pyrifera_M_contig8346:6907..6916Macrocystis pyrifera P11B4 maleUTRM-pyrifera_M_contig8346 6908..6916 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816741.7000415-CDS-M-pyrifera_M_contig8346:6916..71031622816741.7000415-CDS-M-pyrifera_M_contig8346:6916..7103Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8346 6917..7103 +
1692278150.9966357-CDS-M-pyrifera_M_contig8346:6916..71031692278150.9966357-CDS-M-pyrifera_M_contig8346:6916..7103Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8346 6917..7103 +
1622816741.7122424-CDS-M-pyrifera_M_contig8346:7148..72711622816741.7122424-CDS-M-pyrifera_M_contig8346:7148..7271Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8346 7149..7271 +
1692278151.00702-CDS-M-pyrifera_M_contig8346:7148..72711692278151.00702-CDS-M-pyrifera_M_contig8346:7148..7271Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8346 7149..7271 +
1622816741.7238145-CDS-M-pyrifera_M_contig8346:7398..79551622816741.7238145-CDS-M-pyrifera_M_contig8346:7398..7955Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8346 7399..7955 +
1692278151.02071-CDS-M-pyrifera_M_contig8346:7398..79551692278151.02071-CDS-M-pyrifera_M_contig8346:7398..7955Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig8346 7399..7955 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig8346.19491.1

>prot_M-pyrifera_M_contig8346.19491.1 ID=prot_M-pyrifera_M_contig8346.19491.1|Name=mRNA_M-pyrifera_M_contig8346.19491.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=289bp
MSSAEPATSVFVSTSRDHPLHMWDAFTGALRATYRAYDHLDEVVAANSVC
FNTNGDKIFAGKRVSIALLFVPRTCVQLLTAGVVFLSKFILASHRFLLVD
AYACYNRMIRVFDVAQPGRSFEARPTCKTRKSKTGQRGIISALAFSPDTS
GGGLFAAGSYAKTICLYSANRWADNGQGSHLAAGRRLSLLLLLSHSMNCV
AHTQRCGGPRTPVQPAFSVCCNAVLEYPHVSRLACLLHSSRGRAVAELAT
PTMGGVTHLKFAPDGRLLFSGSRKNDEIVCWDMRRTKEV
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mRNA from alignment at M-pyrifera_M_contig8346:6908..7955+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig8346.19491.1 ID=mRNA_M-pyrifera_M_contig8346.19491.1|Name=mRNA_M-pyrifera_M_contig8346.19491.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1048bp|location=Sequence derived from alignment at M-pyrifera_M_contig8346:6908..7955+ (Macrocystis pyrifera P11B4 male)
TATCCACACATGTCCTCAGCTGAGCCGGCGACGAGTGTCTTCGTGAGTAC CAGTCGAGATCACCCGTTGCACATGTGGGATGCTTTTACCGGCGCTCTGA GGGCTACGTATCGTGCATACGACCACTTGGATGAAGTGGTCGCGGCAAAC TCCGTTTGCTTCAACACAAACGGCGACAAAATCTTCGCAGGTAAGCGTAC CCCAGTTTGGAATGTTTCCATCGCTCGCACCCATTCGTGAGGTGTCTCGA TTGCGCTATTATTTGTGCCTCGTACATGTGTGCAATTGCTTACTGCCGGA GTTGTGTTTCTGTCAAAGTTTATTCTTGCGTCTCATCGTTTCCTGCTTGT TGATGCATACGCGTGTTGACACACAGATGCCCATTTTTCACCCAACCTGA CATCCAAGCGAAGTTCGGATTTAACCCCTTCGTTAATCGACCATACACAT GGGCACGTTGAGAGTCTGACACTTCATTTTCATCTCTGCAGGTTACAATA GAATGATCAGAGTTTTCGACGTGGCCCAGCCAGGGCGATCATTTGAAGCT CGGCCCACTTGCAAAACGCGCAAGAGTAAAACCGGGCAACGTGGGATTAT ATCTGCTCTGGCCTTTTCCCCTGACACTTCCGGAGGGGGGTTATTCGCCG CTGGGTCCTACGCGAAGACGATATGCCTCTACAGCGCGAACAGGTGGGCG GACAATGGGCAGGGGTCACATCTTGCGGCTGGTCGTCGGCTTTCGTTGCT GCTATTGCTGTCTCATTCAATGAATTGTGTTGCACACACGCAGCGTTGTG GTGGACCACGTACACCTGTTCAACCTGCCTTTTCTGTGTGTTGTAACGCT GTGCTTGAATATCCTCATGTGTCTCGGCTCGCTTGCTTACTCCATTCCAG TCGTGGACGTGCTGTCGCGGAGTTGGCGACGCCAACAATGGGGGGGGTAA CGCACCTCAAGTTTGCACCTGATGGTCGGTTACTCTTCTCTGGTTCGCGC AAGAACGATGAAATTGTGTGCTGGGACATGCGACGGACAAAAGAGGTG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig8346:6908..7955+

>mRNA_M-pyrifera_M_contig8346.19491.1 ID=mRNA_M-pyrifera_M_contig8346.19491.1|Name=mRNA_M-pyrifera_M_contig8346.19491.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1734bp|location=Sequence derived from alignment at M-pyrifera_M_contig8346:6908..7955+ (Macrocystis pyrifera P11B4 male)
ATGTCCTCAGCTGAGCCGGCGACGAGTGTCTTCGTGAGTACCAGTCGAGA
TCACCCGTTGCACATGTGGGATGCTTTTACCGGCGCTCTGAGGGCTACGT
ATCGTGCATACGACCACTTGGATGAAGTGGTCGCGGCAAACTCCGTTTGC
TTCAACACAAACGGCGACAAAATCTTCGCAGGTAAGCATGTCCTCAGCTG
AGCCGGCGACGAGTGTCTTCGTGAGTACCAGTCGAGATCACCCGTTGCAC
ATGTGGGATGCTTTTACCGGCGCTCTGAGGGCTACGTATCGTGCATACGA
CCACTTGGATGAAGTGGTCGCGGCAAACTCCGTTTGCTTCAACACAAACG
GCGACAAAATCTTCGCAGGTAAGCGTGTCTCGATTGCGCTATTATTTGTG
CCTCGTACATGTGTGCAATTGCTTACTGCCGGAGTTGTGTTTCTGTCAAA
GTTTATTCTTGCGTCTCATCGTTTCCTGCTTGTTGATGCATACGCGTGTG
TCTCGATTGCGCTATTATTTGTGCCTCGTACATGTGTGCAATTGCTTACT
GCCGGAGTTGTGTTTCTGTCAAAGTTTATTCTTGCGTCTCATCGTTTCCT
GCTTGTTGATGCATACGCGTGTTACAATAGAATGATCAGAGTTTTCGACG
TGGCCCAGCCAGGGCGATCATTTGAAGCTCGGCCCACTTGCAAAACGCGC
AAGAGTAAAACCGGGCAACGTGGGATTATATCTGCTCTGGCCTTTTCCCC
TGACACTTCCGGAGGGGGGTTATTCGCCGCTGGGTCCTACGCGAAGACGA
TATGCCTCTACAGCGCGAACAGGTGGGCGGACAATGGGCAGGGGTCACAT
CTTGCGGCTGGTCGTCGGCTTTCGTTGCTGCTATTGCTGTCTCATTCAAT
GAATTGTGTTGCACACACGCAGCGTTGTGGTGGACCACGTACACCTGTTC
AACCTGCCTTTTCTGTGTGTTGTAACGCTGTGCTTGAATATCCTCATGTG
TCTCGGCTCGCTTGCTTACTCCATTCCAGTCGTGGACGTGCTGTCGCGGA
GTTGGCGACGCCAACAATGGGGGGGGTAACGCACCTCAAGTTTGCACCTG
ATGGTCGGTTACTCTTCTCTGGTTCGCGCAAGAACGATGAAATTGTGTGC
TGGGACATGCGACGGACAAAAGAGGTGGTTACAATAGAATGATCAGAGTT
TTCGACGTGGCCCAGCCAGGGCGATCATTTGAAGCTCGGCCCACTTGCAA
AACGCGCAAGAGTAAAACCGGGCAACGTGGGATTATATCTGCTCTGGCCT
TTTCCCCTGACACTTCCGGAGGGGGGTTATTCGCCGCTGGGTCCTACGCG
AAGACGATATGCCTCTACAGCGCGAACAGGTGGGCGGACAATGGGCAGGG
GTCACATCTTGCGGCTGGTCGTCGGCTTTCGTTGCTGCTATTGCTGTCTC
ATTCAATGAATTGTGTTGCACACACGCAGCGTTGTGGTGGACCACGTACA
CCTGTTCAACCTGCCTTTTCTGTGTGTTGTAACGCTGTGCTTGAATATCC
TCATGTGTCTCGGCTCGCTTGCTTACTCCATTCCAGTCGTGGACGTGCTG
TCGCGGAGTTGGCGACGCCAACAATGGGGGGGGTAACGCACCTCAAGTTT
GCACCTGATGGTCGGTTACTCTTCTCTGGTTCGCGCAAGAACGATGAAAT
TGTGTGCTGGGACATGCGACGGACAAAAGAGGTG
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