mRNA_M-pyrifera_M_contig109336.1946.1 (mRNA) Macrocystis pyrifera P11B4 male
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Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Match: A0A7S4NIF3_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Paramoeba aestuarina TaxID=180227 RepID=A0A7S4NIF3_9EUKA) HSP 1 Score: 63.5 bits (153), Expect = 7.870e-10 Identity = 29/64 (45.31%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 100 IDVHGNSLDGSIPESMGELLGYNLSYLDLSSNELTGSIPSFLDGAEAVFRYIDLSDNPFACPIP 291
ID N + G IP+ +G L ++L+ LDLS+N L G++P F F Y++LS+NPF CPIP
Sbjct: 4 IDFSFNEISGIIPDVIGNLADFSLNSLDLSNNTLGGTVPEFFVTDANDFTYVNLSNNPFICPIP 67
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Match: A0A836C7K7_9CHLO (Guanylate cyclase domain-containing protein n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836C7K7_9CHLO) HSP 1 Score: 58.9 bits (141), Expect = 5.730e-8 Identity = 37/94 (39.36%), Postives = 51/94 (54.26%), Query Frame = 1
Query: 16 ELQTLELQENSLVGSIPQTTFLLRAIIEIDVH--GNSLDGSIPE-SMGELLGYNLSYLDLSSNELTGSIPSFLDGAEAVFRYIDLSDNPFACPI 288
+LQ L+L N L G++P FL + DVH N L+G PE G L +LSY++LSSN L GS+P +L ++D S N A P+
Sbjct: 238 KLQVLDLDSNLLTGALPPEAFLAGGGVLRDVHLGNNGLEGPFPELPAGSQLSASLSYVELSSNALNGSLPRYL--GLIPLTHLDASGNRLAGPV 329
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Match: UPI0010169010 (receptor-like protein 56 isoform X1 n=2 Tax=Vigna unguiculata TaxID=3917 RepID=UPI0010169010) HSP 1 Score: 56.6 bits (135), Expect = 3.650e-7 Identity = 33/82 (40.24%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 25 TLELQENSLVGSIPQTTFLLRAIIEIDVHGNSLDGSIPESMGELLGYNLSYLDLSSNELTGSIPSFLDGAEAVFRYIDLSDN 270
+L++ N LVG+IP+ + E+ + N G IP + + L NLSYLDLS N LTG +PSFL+ + ++I LS+N
Sbjct: 903 SLDISNNHLVGNIPRILTNFSKLSELRMSNNHFQGFIPLELPQQLR-NLSYLDLSQNNLTGLVPSFLNSS---VKFIHLSNN 980
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Match: A0A5N6NYR6_9ASTR (LRRNT_2 domain-containing protein n=2 Tax=Mikania micrantha TaxID=192012 RepID=A0A5N6NYR6_9ASTR) HSP 1 Score: 55.1 bits (131), Expect = 1.240e-6 Identity = 30/97 (30.93%), Postives = 49/97 (50.52%), Query Frame = 1
Query: 1 ISNLFELQTLELQENSLVGSIPQTTFLLRAIIEIDVHGNSLDGSIPESMGELLGYNLSYLDLSSNELTGSIPSFLDGAEAVFRYIDLSDNPFACPIP 291
+SNL ++ ++L L S P+ L+ + ID+ + + +IPE + L+YL+LSSN +TG + L + +DL N F PIP
Sbjct: 419 MSNLSYVEEIDLCSCKLGPSFPKWIQRLKNLSHIDISNSGISDTIPEDFWNMWPSQLTYLNLSSNNITGKVTDLLSNFDVESSTLDLGSNKFYGPIP 515
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Match: D8S5S5_SELML (LRRNT_2 domain-containing protein (Fragment) n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8S5S5_SELML) HSP 1 Score: 54.7 bits (130), Expect = 1.690e-6 Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 1
Query: 1 ISNLFELQTLELQENSLVGSIPQTTFLLRAIIEIDVHGNSLDGSIPESMGELLGYNLSYLDLSSNELTGSIPSFL 225
++ L EL T+ L L G IP LR + +VHGNS+DGSIP + G+LL L LDL SN +G++P+ L
Sbjct: 425 LATLPELSTISLSRCKLQGPIPSCLSHLRTL---NVHGNSMDGSIPSTFGKLL--RLEVLDLGSNFFSGALPASL 494
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Match: A0A835A232_9POAL (LRRNT_2 domain-containing protein n=1 Tax=Digitaria exilis TaxID=1010633 RepID=A0A835A232_9POAL) HSP 1 Score: 54.3 bits (129), Expect = 2.280e-6 Identity = 36/95 (37.89%), Postives = 51/95 (53.68%), Query Frame = 1
Query: 16 ELQTLELQENSLVGSIPQ---TTFLLRAIIEIDVHGNSLDGSIPESMGELLGYNLSYLDLSSNELTGSIPSFLDGAEAVFRYIDLSDNPFACPIP 291
E+ L+L N+L+ IP TF L +ID+ N L G++P +L G + L+LSSN LTG+IP F +D+S N FA P+P
Sbjct: 463 EITELDLSSNALIDKIPDWFWQTFSLAT--DIDISNNQLSGTLP---ADLSGMSCLMLNLSSNNLTGTIPQF----PRNITTLDISRNSFAGPLP 548
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Match: A0A2U1Q6C4_ARTAN (Receptor like protein 1 n=1 Tax=Artemisia annua TaxID=35608 RepID=A0A2U1Q6C4_ARTAN) HSP 1 Score: 53.1 bits (126), Expect = 6.030e-6 Identity = 29/73 (39.73%), Postives = 46/73 (63.01%), Query Frame = 1
Query: 1 ISNLFELQTLELQENSLVGSIPQTTFLLRAIIEIDVHGNSLDGSIPESMGELLGYNLSYLDLSSNELTGSIPS 219
+ N L+ L L+ NS GSI + ++E+++ N + G+IP+ +G+LL +SYL+LS N L+GSIPS
Sbjct: 592 VENNTMLEVLYLRNNSFGGSIRMPLYRNFQLLELEISSNHIMGAIPQDIGKLLA-GISYLNLSHNALSGSIPS 663
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Match: A0A6P6VRH3_COFAR (probable LRR receptor-like serine/threonine-protein kinase At1g53420 n=1 Tax=Coffea arabica TaxID=13443 RepID=A0A6P6VRH3_COFAR) HSP 1 Score: 52.8 bits (125), Expect = 8.170e-6 Identity = 29/92 (31.52%), Postives = 49/92 (53.26%), Query Frame = 1
Query: 1 ISNLFELQTLELQENSLVGSIPQTTFLLRAIIEIDVHGNSLDGSIPESMGELLGYNLSYLDLSSNELTGSIPSFLDGAEAVFRYIDLSDNPF 276
I N+ L L L+ SL G IP + ++ +D+ N+L G IP + + + L ++ L SN L+G++P +L Y+D+S+N F
Sbjct: 337 IYNMVSLSFLTLRNCSLTGPIPDYIWWFTNLLYLDLSFNNLMGIIPPDLSQ---FQLQFIFLRSNNLSGTVPGWLTSLSYSGSYVDVSENSF 425
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Match: A0A6A3A8D8_HIBSY (Putative Pentatricopeptide n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3A8D8_HIBSY) HSP 1 Score: 52.4 bits (124), Expect = 1.000e-5 Identity = 33/100 (33.00%), Postives = 54/100 (54.00%), Query Frame = 1
Query: 1 ISNLFELQTLELQENSLVGSIPQTTFLLRAIIEI---DVHGNSLDGSIPESMGELLGYNLSYLDLSSNELTGSIPSFLDGAEAVFRYIDLSDNPFACPIP 291
+ N+ +L+TL + +L T F + I + + NSL GSIP+SM + G L ++DLS+N+L G++P FL G + ++L DN +P
Sbjct: 180 LGNMQKLKTLTISHANLTAQREDTNFPHASRISLKNLSLASNSLSGSIPDSMSAVTG--LVHVDLSNNQLNGTVPKFLSG----LKVLNLEDNGLRGVLP 273
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Match: A0A7J7PP56_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7PP56_9CHLO) HSP 1 Score: 52.4 bits (124), Expect = 1.110e-5 Identity = 28/69 (40.58%), Postives = 41/69 (59.42%), Query Frame = 1
Query: 100 IDVHGNSLDGSIPESMGELLGYNLSYLDLSSNELTGSIPSFLDG-----AEAVFRYIDLSDNPFACPIP 291
+D+ GN G +P S+G L G LSYLDLSSN LTGS+ + D +++ +++LS N A +P
Sbjct: 555 LDLSGNGFSGPVPASLGGLQG--LSYLDLSSNALTGSLAPYADALAANASQSALLHLNLSSNRLAGEVP 621 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig109336.1946.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig109336.1946.1 >prot_M-pyrifera_M_contig109336.1946.1 ID=prot_M-pyrifera_M_contig109336.1946.1|Name=mRNA_M-pyrifera_M_contig109336.1946.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=99bp ISNLFELQTLELQENSLVGSIPQTTFLLRAIIEIDVHGNSLDGSIPESMGback to top mRNA from alignment at M-pyrifera_M_contig109336:304..600- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig109336.1946.1 ID=mRNA_M-pyrifera_M_contig109336.1946.1|Name=mRNA_M-pyrifera_M_contig109336.1946.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=297bp|location=Sequence derived from alignment at M-pyrifera_M_contig109336:304..600- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig109336:304..600- >mRNA_M-pyrifera_M_contig109336.1946.1 ID=mRNA_M-pyrifera_M_contig109336.1946.1|Name=mRNA_M-pyrifera_M_contig109336.1946.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=594bp|location=Sequence derived from alignment at M-pyrifera_M_contig109336:304..600- (Macrocystis pyrifera P11B4 male)back to top |