mRNA_M-pyrifera_M_contig8331.19458.1 (mRNA) Macrocystis pyrifera P11B4 male
Overview
Homology
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Match: A0A6H5L4N8_9PHAE (Tr-type G domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4N8_9PHAE) HSP 1 Score: 143 bits (361), Expect = 4.660e-38 Identity = 71/79 (89.87%), Postives = 76/79 (96.20%), Query Frame = 3 Query: 3 IMKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHREVDKVSKGASAAVRVEDSNGGSTLTYGR 239 IMKEHVFNMKDPIIVGMEVIEG LRVGTPLCIPAMGGMEIGRVTSI+QNHREVDK+ KGAS AVRV+D++GGSTLTYGR Sbjct: 948 IMKEHVFNMKDPIIVGMEVIEGNLRVGTPLCIPAMGGMEIGRVTSIEQNHREVDKMGKGASGAVRVDDAHGGSTLTYGR 1026
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Match: A0A836CHS5_9STRA (Tr-type G domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHS5_9STRA) HSP 1 Score: 126 bits (316), Expect = 5.510e-32 Identity = 61/79 (77.22%), Postives = 70/79 (88.61%), Query Frame = 3 Query: 3 IMKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHREVDKVSKGASAAVRVEDSNGGSTLTYGR 239 IM +HVFN KDPIIVGMEVIEGTLRVGTPLCIPA+ G+ IGRV SI+ NHR+V K++KG S AVR+ED+NGGSTLTYGR Sbjct: 895 IMPQHVFNKKDPIIVGMEVIEGTLRVGTPLCIPALEGLPIGRVASIEDNHRQVQKLAKGGSGAVRIEDANGGSTLTYGR 973
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Match: A0A7R9ZL82_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9ZL82_9STRA) HSP 1 Score: 96.3 bits (238), Expect = 3.070e-23 Identity = 44/79 (55.70%), Postives = 62/79 (78.48%), Query Frame = 3 Query: 3 IMKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHREVDKVSKGASAAVRVEDSNGGSTLTYGR 239 I+ +HVFN KDPIIVG+EV+EG L+VGTPLC+PA+GG+ +G+VTSI+ + RE D KG+S A+++ + G +TYGR Sbjct: 66 ILPQHVFNQKDPIIVGVEVVEGILKVGTPLCVPALGGLHVGKVTSIENSGREQDTAKKGSSVAIKIVN-EGNPNITYGR 143
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Match: A0A7R9WHP7_9STRA (Hypothetical protein n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WHP7_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 3.970e-22 Identity = 49/80 (61.25%), Postives = 64/80 (80.00%), Query Frame = 3 Query: 3 IMKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHREVDKVSKGASAAVR-VEDSNGGSTLTYGR 239 I+ +HVFN KDPIIVG+EV+EG L+VGTPLC+PA+GG+ +G+VTSI+ N RE + KGAS AV+ V +SN T+TYGR Sbjct: 658 ILPQHVFNQKDPIIVGVEVVEGILKVGTPLCVPAIGGLHVGKVTSIESNGREQETAKKGASVAVKIVNESN--PTITYGR 735
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Match: A0A7S1FSJ9_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1FSJ9_9STRA) HSP 1 Score: 91.3 bits (225), Expect = 1.760e-21 Identity = 41/79 (51.90%), Postives = 61/79 (77.22%), Query Frame = 3 Query: 3 IMKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHREVDKVSKGASAAVRVEDSNGGSTLTYGR 239 I+ +H+FN KDPII+G+EV G L+VGTPLC+PA+GG+ +G+VTSI+ N +++D KG+S A ++E+ + LTYGR Sbjct: 47 ILPQHIFNQKDPIILGVEVTHGILKVGTPLCVPALGGLHVGKVTSIEMNGKQMDTARKGSSIACKIENESN-PNLTYGR 124
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Match: A0A7S0CGW3_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0CGW3_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 1.830e-21 Identity = 46/79 (58.23%), Postives = 62/79 (78.48%), Query Frame = 3 Query: 3 IMKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHREVDKVSKGASAAVRVEDSNGGSTLTYGR 239 I+ +H+FN KDPIIVG+EV EG L++GTPLCIPA+ G+ IG+VTSI+ N ++ D KGAS AV++E+ + TLTYGR Sbjct: 247 ILPQHIFNQKDPIIVGIEVAEGILKIGTPLCIPALEGLYIGKVTSIEMNGKQQDTARKGASVAVKIENEHN-PTLTYGR 324
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Match: A0A1Z5JER2_FISSO (Translation initiation factor 5B n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JER2_FISSO) HSP 1 Score: 95.9 bits (237), Expect = 2.590e-21 Identity = 44/79 (55.70%), Postives = 61/79 (77.22%), Query Frame = 3 Query: 3 IMKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHREVDKVSKGASAAVRVEDSNGGSTLTYGR 239 I+ +H+FN KDPIIVG+EV+EG L++GTPLC+PA+GG+ +G+VTSI+ N RE KG+S AVR+ + G +TYGR Sbjct: 855 ILPQHIFNQKDPIIVGVEVVEGILKLGTPLCVPALGGLHVGKVTSIESNGREQQSARKGSSVAVRIVN-EGNPNITYGR 932
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Match: B8BV18_THAPS (Tr-type G domain-containing protein n=2 Tax=Thalassiosira TaxID=35127 RepID=B8BV18_THAPS) HSP 1 Score: 95.5 bits (236), Expect = 3.390e-21 Identity = 47/80 (58.75%), Postives = 63/80 (78.75%), Query Frame = 3 Query: 3 IMKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHREVDKVSKGASAAVR-VEDSNGGSTLTYGR 239 I+ +HVFN KDPIIVG+EV+EG L+VGTPLC+PA+GG+ +G VTSI+ N RE + KG+S A++ V +SN T+TYGR Sbjct: 468 ILPQHVFNQKDPIIVGVEVVEGILKVGTPLCVPALGGLTVGTVTSIESNGREQETAKKGSSVAIKIVNESN--PTITYGR 545
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Match: B7GD73_PHATC (Predicted protein (Fragment) n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GD73_PHATC) HSP 1 Score: 95.5 bits (236), Expect = 3.410e-21 Identity = 46/80 (57.50%), Postives = 63/80 (78.75%), Query Frame = 3 Query: 3 IMKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHREVDKVSKGASAAVR-VEDSNGGSTLTYGR 239 ++ +HVFN KDPIIVG+E++EG L+VGTPLC+PA+GG+ IG+VTSI+ N RE + KG S A++ V +SN T+TYGR Sbjct: 476 VLPQHVFNQKDPIIVGVEIVEGILKVGTPLCVPALGGLHIGKVTSIEMNGREQETARKGLSVAIKIVNESN--PTITYGR 553
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Match: A0A1E7FX92_9STRA (p-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FX92_9STRA) HSP 1 Score: 95.5 bits (236), Expect = 3.450e-21 Identity = 43/79 (54.43%), Postives = 62/79 (78.48%), Query Frame = 3 Query: 3 IMKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHREVDKVSKGASAAVRVEDSNGGSTLTYGR 239 I+ +HVFN KDPIIVG+E++EG L++GTPLC+PA+GG+ IG+VTSI+ N +E + KG S A+++ + G T+TYGR Sbjct: 504 ILPQHVFNQKDPIIVGVEIVEGILKIGTPLCVPALGGLHIGKVTSIEMNGKEQETARKGMSVAIKILN-EGNPTITYGR 581 The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig8331.19458.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_M-pyrifera_M_contig8331.19458.1 >prot_M-pyrifera_M_contig8331.19458.1 ID=prot_M-pyrifera_M_contig8331.19458.1|Name=mRNA_M-pyrifera_M_contig8331.19458.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp MKEHVFNMKDPIIVGMEVIEGTLRVGTPLCIPAMGGMEIGRVTSIQQNHRback to top mRNA from alignment at M-pyrifera_M_contig8331:9694..10763- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_M-pyrifera_M_contig8331.19458.1 ID=mRNA_M-pyrifera_M_contig8331.19458.1|Name=mRNA_M-pyrifera_M_contig8331.19458.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=1070bp|location=Sequence derived from alignment at M-pyrifera_M_contig8331:9694..10763- (Macrocystis pyrifera P11B4 male)back to top Coding sequence (CDS) from alignment at M-pyrifera_M_contig8331:9694..10763- >mRNA_M-pyrifera_M_contig8331.19458.1 ID=mRNA_M-pyrifera_M_contig8331.19458.1|Name=mRNA_M-pyrifera_M_contig8331.19458.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=468bp|location=Sequence derived from alignment at M-pyrifera_M_contig8331:9694..10763- (Macrocystis pyrifera P11B4 male)back to top |