mRNA_M-pyrifera_M_contig83253.19445.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83253.19445.1
Unique NamemRNA_M-pyrifera_M_contig83253.19445.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Match: UPI00032ADE7D (diamine acetyltransferase 2 isoform X1 n=4 Tax=Ochotona TaxID=9977 RepID=UPI00032ADE7D)

HSP 1 Score: 108 bits (271), Expect = 3.190e-27
Identity = 62/155 (40.00%), Postives = 88/155 (56.77%), Query Frame = 1
Query:    1 LAVSEKAAEKVELTARDLVRDGFGKRRSFIVLLATLPEDDPRASDGPACASYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGATMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVL---EEWYLTRISGKKLELLGG 456
            LA  EK +++V+++   L  DGFG+   +  L+A LP         PA    PG  IV +GL++ +YSTW  R VYLED+Y  P  R  GIG +II   A +A+    S+ +  VL WNK+A+D+YKA+GA  L   E W   R  G+ + +L G
Sbjct:   24 LAEFEKLSDQVKISEEALRADGFGENAFYHCLVAELP---------PAPGEQPGPCIVGYGLYYFIYSTWKGRNVYLEDIYVRPQYRGQGIGTKIIQKVAEVALDKGCSQFRLAVLDWNKKAMDLYKALGAQDLTAAEGWRAFRFEGEAMRMLAG 169          
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Match: A0A286X9C1_CAVPO (Spermidine/spermine N1-acetyltransferase family member 2 n=1 Tax=Cavia porcellus TaxID=10141 RepID=A0A286X9C1_CAVPO)

HSP 1 Score: 106 bits (264), Expect = 3.600e-26
Identity = 63/155 (40.65%), Postives = 86/155 (55.48%), Query Frame = 1
Query:    1 LAVSEKAAEKVELTARDLVRDGFGKRRSFIVLLATLPEDDPRASDGPACASYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGATMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVL---EEWYLTRISGKKLELLGG 456
            LA  EK +E+V ++   L  DGFG+   +  L+A +          PA     G  IV +GL+  VYSTW  R +YLED+Y +P  R  GIG +II   A +A+    S+ +  VL WNKRAID+YKA+GA  L   E W+  R  G+ +E L G
Sbjct:   24 LAEYEKLSEQVTISEEGLRADGFGENPFYHCLVAEIL---------PAPGDPQGPRIVGYGLYCFVYSTWKGRNIYLEDIYVMPEYRGQGIGSKIIKKVAEVALDQGCSQFRLAVLEWNKRAIDLYKALGARDLTQEEGWHAFRFEGEAMEKLAG 169          
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Match: G5B5D3_HETGA (Diamine acetyltransferase 2 n=5 Tax=Hystricomorpha TaxID=33550 RepID=G5B5D3_HETGA)

HSP 1 Score: 105 bits (263), Expect = 5.090e-26
Identity = 61/156 (39.10%), Postives = 89/156 (57.05%), Query Frame = 1
Query:    1 LAVSEKAAEKVELTARDLVRDGFGKRRSFIVLLATLPEDDPRASDGPACASYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGATMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVL---EEWYLTRISGKKLELLGGE 459
            LA  EK +++V+++   L  DGFG+   +  L+A +          PA     G +IV +GL++ +YSTW  R VYLED+Y +P  R  GIG +II   A +A+    S+ +  VL WNKRAID+YKA+GA  L   E W+     G+ +  LGG+
Sbjct:   24 LAEYEKLSDQVKISEEALRADGFGENPFYHCLVAEIL---------PAPGERQGPSIVGYGLYYFIYSTWKGRNVYLEDVYVMPEYRGQGIGSKIIKKVAEVALDQGCSQFRLAVLEWNKRAIDLYKALGAQDLTQVEGWHAFCFEGEAMRKLGGK 170          
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Match: A0A7J8D1L3_MOLMO (Spermidine/spermine N1-acetyltransferase family member 2 n=2 Tax=Microchiroptera TaxID=30560 RepID=A0A7J8D1L3_MOLMO)

HSP 1 Score: 105 bits (262), Expect = 7.200e-26
Identity = 62/158 (39.24%), Postives = 92/158 (58.23%), Query Frame = 1
Query:    1 LAVSEKAAEKVELTARDLVRDGFGKRRSFIVLLA-TLPE-DDPRASDGPACASYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGATMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVLEE---WYLTRISGKKLELLGGE 459
            LA  EK +++V++   DL  DGFG+   +  L+A +LP+  DP+   GP         +V +GL++ +YSTW  R +YLED+Y  P  R  GIG +II   A +A+    S+L+   L WNKRA+D+YKA+GA  L E   W+  R  G+ +  L G+
Sbjct:   24 LAEFEKLSDQVKICEEDLRADGFGENPFYHCLIAESLPDLGDPQ---GPC--------VVGYGLYYFIYSTWKGRNIYLEDIYVKPEYRGQGIGSKIIKKVAEVAVDKGCSQLRLSALNWNKRAVDLYKALGAQDLTEIEGWHSFRFEGEVMRKLAGK 170          
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Match: A0A8J6GJ09_MICOH (Diamine acetyltransferase 2 n=5 Tax=Arvicolinae TaxID=39087 RepID=A0A8J6GJ09_MICOH)

HSP 1 Score: 103 bits (257), Expect = 3.950e-25
Identity = 59/155 (38.06%), Postives = 86/155 (55.48%), Query Frame = 1
Query:    1 LAVSEKAAEKVELTARDLVRDGFGKRRSFIVLLATLPEDDPRASDGPACASYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGATMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVL---EEWYLTRISGKKLELLGG 456
            LA  EK + +V+++   L  DGFG+   F  L+A +          PA     G ++V FGL++ +YSTW  R VYLED+Y +P  R  GIG +II   A  A+    S+ +  VL WNK+AID+YK++GA  L   E W+  R   + + +L G
Sbjct:   24 LAEYEKLSHQVKISEEALRADGFGENPFFHCLVAEIV---------PAPGELQGPSVVGFGLYYFIYSTWTGRNVYLEDIYVMPQYRGQGIGTKIIKKVAEEALHKGCSQFRLAVLDWNKKAIDLYKSLGAQDLTGAEGWHFFRFEQEAMRVLAG 169          
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Match: A0A6I9JP54_CHRAS (diamine acetyltransferase 2 n=1 Tax=Chrysochloris asiatica TaxID=185453 RepID=A0A6I9JP54_CHRAS)

HSP 1 Score: 103 bits (257), Expect = 4.060e-25
Identity = 58/153 (37.91%), Postives = 86/153 (56.21%), Query Frame = 1
Query:    1 LAVSEKAAEKVELTARDLVRDGFGKRRSFIVLLATLPEDDPRASDGPACASYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGATMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVLEE---WYLTRISGKKLELL 450
            LA  EK +++V+++   L  DGFG+   +  ++A +P         PA     G  +V +GL++ +YSTW  R VYLED+Y +P  R  GIG +II   A +A+    S+ +  VL WNKRA+D+YKA+GA  L E   W+  R  G  +  L
Sbjct:   24 LAEYEKLSDQVKISEEALRADGFGENPFYHCVVAEIP---------PAHGEPQGARVVGYGLYYFIYSTWKGRNVYLEDIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDWNKRAMDLYKALGAQDLTEAEGWHSFRFEGDTMREL 167          
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Match: A0A2K6FT15_PROCO (Spermidine/spermine N1-acetyltransferase family member 2 n=10 Tax=Euarchontoglires TaxID=314146 RepID=A0A2K6FT15_PROCO)

HSP 1 Score: 102 bits (255), Expect = 8.100e-25
Identity = 57/155 (36.77%), Postives = 85/155 (54.84%), Query Frame = 1
Query:    1 LAVSEKAAEKVELTARDLVRDGFGKRRSFIVLLATLPEDDPRASDGPACASYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGATMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVLEE---WYLTRISGKKLELLGG 456
            LA  EK +++V ++   L  DGFG+   +  L+A +          PA     G  +V +GL++ +YSTW  R +YLED+Y  P  R  GIG +II   A +A+    S+ +  VL WNKRA+D+YKA+GA  L E   W+  R  G+ +  + G
Sbjct:   24 LAEYEKLSDQVTISEEALRADGFGENPFYHCLVAEIL---------PAPGELQGPRVVGYGLYYFIYSTWKGRSIYLEDIYVTPEYRGQGIGSKIIKRVAEVALDKGCSQFRLAVLDWNKRAMDLYKALGAQDLTEAEGWHSFRFEGEAMREMAG 169          
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Match: A0A5F9CAC6_RABIT (N-acetyltransferase domain-containing protein n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=A0A5F9CAC6_RABIT)

HSP 1 Score: 103 bits (257), Expect = 9.330e-25
Identity = 62/156 (39.74%), Postives = 89/156 (57.05%), Query Frame = 1
Query:    1 LAVSEKAAEKVELTARDLVRDGFGKRRSFIVLLAT-LPEDDPRASDGPACASYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGATMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVLEE---WYLTRISGKKLELLGG 456
            LA  EK +++V++T   L  DGFG+   +  L+A  LPE  P    GP         +V +GL++ +YSTW  R VYLED+Y +P  R  GIG +II   A +A+    S+ +  VL WNK+A+D+YKA+GA  L E   W+  R  G+ +  L G
Sbjct:   57 LAEYEKLSDQVKITEEVLRADGFGENPFYHCLVAEILPE--PGEPQGPF--------VVGYGLYYYIYSTWKGRNVYLEDIYVMPEYRGQGIGTKIIKKVAEVALDKGCSQFRLAVLNWNKKAMDLYKALGAQDLTEAEGWHSFRFEGEAMRELAG 202          
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Match: M2X1I9_GALSU (Diamine N-acetyltransferase n=1 Tax=Galdieria sulphuraria TaxID=130081 RepID=M2X1I9_GALSU)

HSP 1 Score: 102 bits (253), Expect = 1.790e-24
Identity = 59/149 (39.60%), Postives = 81/149 (54.36%), Query Frame = 1
Query:    1 LAVSEKAAEKVELTARDLVRDGFGKRRS-FIVLLATLPEDDPRASDGPACASYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGATMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVLEEWYLTRISGKKLE 444
            LA  EK    VE+T RDL RDGF  +   F V+LA + E +             G   V F L+F VYSTW  + ++LEDL+ +P  R  GIG  ++   A +A+     R QW VLTWN  +ID Y+A+GA  ++EW L R+    +E
Sbjct:   26 LAEYEKEPHSVEITERDLERDGFETQPPLFHVVLAEVLEQN-------------GWKCVGFALWFYVYSTWQGKALHLEDLFVLPQYRNRGIGKALLRRCAQVALSEKCKRYQWNVLTWNTPSIDFYEAVGAKAMKEWMLMRMDKYSME 161          
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Match: UPI000333F7FD (thialysine N-epsilon-acetyltransferase isoform X1 n=3 Tax=Echinops telfairi TaxID=9371 RepID=UPI000333F7FD)

HSP 1 Score: 101 bits (252), Expect = 2.290e-24
Identity = 56/155 (36.13%), Postives = 87/155 (56.13%), Query Frame = 1
Query:    1 LAVSEKAAEKVELTARDLVRDGFGKRRSFIVLLATLPEDDPRASDGPACASYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGATMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVLEE---WYLTRISGKKLELLGG 456
            LA  EK +++V+++   L  DGFG+   +  ++A +          PA     G  +V +GL++ +YSTW  R VYLED+Y +P  R  GIG +II   A +A+    ++L+  V+ WNKRA+D+YK +GA  L E   W+  R  G+ +  L G
Sbjct:   24 LAEYEKLSDQVQISEEALRADGFGENPFYHCVVAEIL---------PAQGEPQGPQVVGYGLYYFIYSTWKGRNVYLEDIYVMPEHRGQGIGSKIIQKVAQVALAKGCTQLRLAVVDWNKRAMDLYKTLGARDLTEAEGWHSFRFEGEAMRELAG 169          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83253.19445.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI00032ADE7D3.190e-2740.00diamine acetyltransferase 2 isoform X1 n=4 Tax=Och... [more]
A0A286X9C1_CAVPO3.600e-2640.65Spermidine/spermine N1-acetyltransferase family me... [more]
G5B5D3_HETGA5.090e-2639.10Diamine acetyltransferase 2 n=5 Tax=Hystricomorpha... [more]
A0A7J8D1L3_MOLMO7.200e-2639.24Spermidine/spermine N1-acetyltransferase family me... [more]
A0A8J6GJ09_MICOH3.950e-2538.06Diamine acetyltransferase 2 n=5 Tax=Arvicolinae Ta... [more]
A0A6I9JP54_CHRAS4.060e-2537.91diamine acetyltransferase 2 n=1 Tax=Chrysochloris ... [more]
A0A2K6FT15_PROCO8.100e-2536.77Spermidine/spermine N1-acetyltransferase family me... [more]
A0A5F9CAC6_RABIT9.330e-2539.74N-acetyltransferase domain-containing protein n=1 ... [more]
M2X1I9_GALSU1.790e-2439.60Diamine N-acetyltransferase n=1 Tax=Galdieria sulp... [more]
UPI000333F7FD2.290e-2436.13thialysine N-epsilon-acetyltransferase isoform X1 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83253contigM-pyrifera_M_contig83253:3..461 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeMammalia
Seed ortholog score108.2
Seed ortholog evalue3.4e-21
Seed eggNOG ortholog9978.XP_004594841.1
Preferred nameSAT2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.FR47-like protein
EggNOG OGs35UFH@314146,38FNC@33154,3BRRY@33208,3E4KS@33213,3JIWK@40674,48J56@7711,49EFH@7742,COG0454@1,KOG3216@2759
COG Functional cat.E
Best tax levelEuarchontoglires
Best eggNOG OGNA|NA|NA
Exons1
Model size459
Cds size459
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816739.3905694-CDS-M-pyrifera_M_contig83253:2..4611622816739.3905694-CDS-M-pyrifera_M_contig83253:2..461Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83253 3..461 +
1692278149.7712462-CDS-M-pyrifera_M_contig83253:2..4611692278149.7712462-CDS-M-pyrifera_M_contig83253:2..461Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83253 3..461 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83253.19445.1prot_M-pyrifera_M_contig83253.19445.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83253 3..461 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83253.19445.1

>prot_M-pyrifera_M_contig83253.19445.1 ID=prot_M-pyrifera_M_contig83253.19445.1|Name=mRNA_M-pyrifera_M_contig83253.19445.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=153bp
LAVSEKAAEKVELTARDLVRDGFGKRRSFIVLLATLPEDDPRASDGPACA
SYPGHNIVAFGLFFEVYSTWVRRFVYLEDLYCVPSARRLGIGGRIISAGA
TMAIVTNASRLQWIVLTWNKRAIDVYKAMGASVLEEWYLTRISGKKLELL
GGE
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mRNA from alignment at M-pyrifera_M_contig83253:3..461+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83253.19445.1 ID=mRNA_M-pyrifera_M_contig83253.19445.1|Name=mRNA_M-pyrifera_M_contig83253.19445.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=459bp|location=Sequence derived from alignment at M-pyrifera_M_contig83253:3..461+ (Macrocystis pyrifera P11B4 male)
TTGGCGGTGTCTGAGAAGGCGGCGGAGAAGGTGGAGTTGACAGCGCGAGA CCTTGTTCGGGATGGGTTTGGAAAGCGTCGTAGCTTTATCGTGCTGCTGG CGACATTGCCGGAAGATGACCCGCGAGCGAGCGATGGCCCTGCTTGTGCT TCTTACCCCGGTCACAACATCGTGGCGTTCGGTCTCTTCTTCGAAGTCTA CTCCACGTGGGTGCGTCGCTTCGTCTACTTGGAGGACTTGTATTGCGTGC CTTCCGCGCGGAGATTGGGCATCGGTGGACGTATCATCTCGGCTGGTGCC ACCATGGCCATCGTCACCAACGCCTCCAGATTGCAGTGGATCGTGCTCAC CTGGAACAAGAGGGCCATCGACGTCTACAAGGCCATGGGCGCCTCCGTGC TCGAAGAGTGGTACCTCACCAGGATCTCCGGCAAGAAACTAGAGCTCCTA GGCGGGGAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83253:3..461+

>mRNA_M-pyrifera_M_contig83253.19445.1 ID=mRNA_M-pyrifera_M_contig83253.19445.1|Name=mRNA_M-pyrifera_M_contig83253.19445.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=918bp|location=Sequence derived from alignment at M-pyrifera_M_contig83253:3..461+ (Macrocystis pyrifera P11B4 male)
TTGGCGGTGTCTGAGAAGGCGGCGGAGAAGGTGGAGTTGACAGCGCGAGA
CCTTGTTCGGGATGGGTTTGGAAAGCGTCGTAGCTTTATCGTGCTGCTGG
CGACATTGCCGGAAGATGACCCGCGAGCGAGCGATGGCCCTGCTTGTGCT
TCTTACCCCGGTCACAACATCGTGGCGTTCGGTCTCTTCTTCGAAGTCTA
CTCCACGTGGGTGCGTCGCTTCGTCTACTTGGAGGACTTGTATTGCGTGC
CTTCCGCGCGGAGATTGGGCATCGGTGGACGTATCATCTCGGCTGGTGCC
ACCATGGCCATCGTCACCAACGCCTCCAGATTGCAGTGGATCGTGCTCAC
CTGGAACAAGAGGGCCATCGACGTCTACAAGGCCATGGGCGCCTCCGTGC
TCGAAGAGTGGTACCTCACCAGGATCTCCGGCAAGAAACTAGAGCTCCTA
GGCGGGGAGTTGGCGGTGTCTGAGAAGGCGGCGGAGAAGGTGGAGTTGAC
AGCGCGAGACCTTGTTCGGGATGGGTTTGGAAAGCGTCGTAGCTTTATCG
TGCTGCTGGCGACATTGCCGGAAGATGACCCGCGAGCGAGCGATGGCCCT
GCTTGTGCTTCTTACCCCGGTCACAACATCGTGGCGTTCGGTCTCTTCTT
CGAAGTCTACTCCACGTGGGTGCGTCGCTTCGTCTACTTGGAGGACTTGT
ATTGCGTGCCTTCCGCGCGGAGATTGGGCATCGGTGGACGTATCATCTCG
GCTGGTGCCACCATGGCCATCGTCACCAACGCCTCCAGATTGCAGTGGAT
CGTGCTCACCTGGAACAAGAGGGCCATCGACGTCTACAAGGCCATGGGCG
CCTCCGTGCTCGAAGAGTGGTACCTCACCAGGATCTCCGGCAAGAAACTA
GAGCTCCTAGGCGGGGAG
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