mRNA_M-pyrifera_M_contig83239.19441.1 (mRNA) Macrocystis pyrifera P11B4 male

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_M-pyrifera_M_contig83239.19441.1
Unique NamemRNA_M-pyrifera_M_contig83239.19441.1
TypemRNA
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Homology
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Match: A0A517PR54_9PLAN (D-beta-hydroxybutyrate dehydrogenase n=5 Tax=Gimesia TaxID=1649453 RepID=A0A517PR54_9PLAN)

HSP 1 Score: 465 bits (1196), Expect = 4.350e-165
Identity = 231/242 (95.45%), Postives = 235/242 (97.11%), Query Frame = 1
Query:    1 SGIGAEIARTLYHEGCDVVIADLHEPEYLVELSTEGQRTLFVPTDLSQTEQCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 726
            SGIGAEIARTL+HEGCDV IADLH PEYL ELS EGQRTLF+ TDLSQ EQCQSLVERVTREWGGVDIL+NNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVL GMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEP+EVASMVSYLCSEQAKSITGACWTIDGGWTAQ
Sbjct:   14 SGIGAEIARTLFHEGCDVAIADLHAPEYLTELSAEGQRTLFISTDLSQVEQCQSLVERVTREWGGVDILVNNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLPGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPSEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 255          
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Match: A0A518A8U5_9PLAN (D-beta-hydroxybutyrate dehydrogenase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518A8U5_9PLAN)

HSP 1 Score: 439 bits (1129), Expect = 7.080e-155
Identity = 213/242 (88.02%), Postives = 233/242 (96.28%), Query Frame = 1
Query:    1 SGIGAEIARTLYHEGCDVVIADLHEPEYLVELSTEGQRTLFVPTDLSQTEQCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 726
            SGIGAEIA+TL+ +GCD+VIADLHEP++L +L  +GQR+LFV TDLSQ  QCQSLVER+++EWGGV+IL+NNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVL GMK+R+WGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGIS+ EVES+VFLKASATGRMIEPAEVASMVSYLCS++AKSITGACWTIDGGWTAQ
Sbjct:   14 SGIGAEIAQTLFRDGCDIVIADLHEPDFLADLKADGQRSLFVTTDLSQPAQCQSLVERISQEWGGVEILVNNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLPGMKQRQWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISVAEVESEVFLKASATGRMIEPAEVASMVSYLCSDKAKSITGACWTIDGGWTAQ 255          
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Match: A0A518IF01_9PLAN (D-beta-hydroxybutyrate dehydrogenase n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IF01_9PLAN)

HSP 1 Score: 413 bits (1062), Expect = 1.140e-144
Identity = 199/242 (82.23%), Postives = 228/242 (94.21%), Query Frame = 1
Query:    1 SGIGAEIARTLYHEGCDVVIADLHEPEYLVELSTEGQRTLFVPTDLSQTEQCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 726
            SGIGAEIA+TL++EGC VV+ADL+EP+YL  L+ E QR L+VPTDLS+ E C++L+ RV +E+G VDIL+NNAGFQH+SPLEDFPE+VW+KMLQVMLTAPFLLT+YV  GMK+++WGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTK+TALEGGPF ITANVICPAYVRTPLVEQQIAAQAETLG+S+EEVESQVFLKASATG+MIEPAEVA+MVSYLCS+QAKSITG+CWTIDGGWTAQ
Sbjct:   14 SGIGAEIAKTLFNEGCHVVVADLNEPDYLSNLAYEMQRALYVPTDLSKQESCEALIARVVQEFGSVDILVNNAGFQHISPLEDFPESVWDKMLQVMLTAPFLLTRYVFPGMKQKQWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKSTALEGGPFGITANVICPAYVRTPLVEQQIAAQAETLGLSLEEVESQVFLKASATGKMIEPAEVAAMVSYLCSDQAKSITGSCWTIDGGWTAQ 255          
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Match: A0A517VGF3_9PLAN (D-beta-hydroxybutyrate dehydrogenase n=4 Tax=Gimesia TaxID=1649453 RepID=A0A517VGF3_9PLAN)

HSP 1 Score: 406 bits (1043), Expect = 8.980e-142
Identity = 200/242 (82.64%), Postives = 219/242 (90.50%), Query Frame = 1
Query:    1 SGIGAEIARTLYHEGCDVVIADLHEPEYLVELSTEGQRTLFVPTDLSQTEQCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 726
            SGIGAEIA+ L+HEGC VVIAD +EP YLV+L  E QRT F+PTDLSQ   CQSLVE+   E+G +DIL+NNAGFQHV+PLE+FPE+ WE MLQVMLTAPFLLT+YV  GMK++ WGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTK+TALEGGPFQITANVICPAYVRTPLVEQQIAAQA TLGIS EEVESQVFLKASATG+MIEPAEVA+MV YLCS+QAKSITGACWTIDGGWTAQ
Sbjct:   14 SGIGAEIAQALFHEGCHVVIADRNEPGYLVDLLAEHQRTQFIPTDLSQQAACQSLVEQTLSEFGSIDILVNNAGFQHVAPLEEFPESTWENMLQVMLTAPFLLTRYVFPGMKQQGWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKSTALEGGPFQITANVICPAYVRTPLVEQQIAAQARTLGISTEEVESQVFLKASATGKMIEPAEVAAMVLYLCSDQAKSITGACWTIDGGWTAQ 255          
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Match: A0A517XE48_9PLAN (D-beta-hydroxybutyrate dehydrogenase n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XE48_9PLAN)

HSP 1 Score: 405 bits (1042), Expect = 1.270e-141
Identity = 198/242 (81.82%), Postives = 222/242 (91.74%), Query Frame = 1
Query:    1 SGIGAEIARTLYHEGCDVVIADLHEPEYLVELSTEGQRTLFVPTDLSQTEQCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 726
            SGIGAEIA+TL+ EGC VVIAD  EPEYL ++ST  Q+  F+PT+LS    CQSL+E+V  E+G +DIL+NNAGFQHVSPLEDFPE+VWE MLQVMLTAPFLLTKYVL GMK++ WGR+INMGSIHSQVASLNKAGYIAAKHGLVGLTK+TALEGGPFQITANVICPAYVRTPLVEQQIAAQAE+LGIS E+VESQVFLKASATG+MIEPAEVA+MVSYLCS+QA+SITGACWT+DGGWTAQ
Sbjct:   14 SGIGAEIAQTLFREGCHVVIADRKEPEYLQDMSTADQQARFIPTNLSLQSDCQSLIEQVLNEFGVIDILVNNAGFQHVSPLEDFPESVWENMLQVMLTAPFLLTKYVLPGMKQQGWGRVINMGSIHSQVASLNKAGYIAAKHGLVGLTKSTALEGGPFQITANVICPAYVRTPLVEQQIAAQAESLGISAEQVESQVFLKASATGKMIEPAEVAAMVSYLCSDQARSITGACWTVDGGWTAQ 255          
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Match: A0A2E2C0Y9_9PLAN (D-beta-hydroxybutyrate dehydrogenase n=3 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E2C0Y9_9PLAN)

HSP 1 Score: 389 bits (998), Expect = 6.410e-135
Identity = 191/242 (78.93%), Postives = 216/242 (89.26%), Query Frame = 1
Query:    1 SGIGAEIARTLYHEGCDVVIADLHEPEYLVELSTEGQRTLFVPTDLSQTEQCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 726
            SGIGAEIA+TL+HEG  VVIAD +EP+YL  LS   +R  F+ TDLSQ   CQSLVE+   E+G +DIL+NNAGFQHV+PLE+FPEA W+ MLQVMLTAPFLLTKYV  GMK++ WGRIINMGSIHSQVASLNKAGYIAAKHGL GLTKTTALEGGP+QITAN+ICPAYVRTPLVE+QIAAQAETLGIS+E+VES+VFLKASATG+MIEPAEVA+MV +LCS+QAKSITGA WTIDGGWTAQ
Sbjct:   14 SGIGAEIAQTLFHEGYHVVIADRNEPDYLANLSASDRRIRFISTDLSQQADCQSLVEQSITEFGVIDILVNNAGFQHVAPLEEFPEATWDNMLQVMLTAPFLLTKYVFPGMKQQGWGRIINMGSIHSQVASLNKAGYIAAKHGLAGLTKTTALEGGPYQITANLICPAYVRTPLVERQIAAQAETLGISVEQVESEVFLKASATGKMIEPAEVAAMVCFLCSDQAKSITGASWTIDGGWTAQ 255          
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Match: A0A517VVA2_9PLAN (D-beta-hydroxybutyrate dehydrogenase n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VVA2_9PLAN)

HSP 1 Score: 383 bits (983), Expect = 1.230e-132
Identity = 182/242 (75.21%), Postives = 214/242 (88.43%), Query Frame = 1
Query:    1 SGIGAEIARTLYHEGCDVVIADLHEPEYLVELSTEGQRTLFVPTDLSQTEQCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 726
            SGIGAEIA+TLY++GC +VIADL+EP++L ELS   Q+  ++PTDLS    CQ+LV+R  +++G VDIL+NNAGFQH+S +EDFPE+VWEKM+QVMLTAPFLLTKYV  GMK ++WGRIINMGSIHS VASLNKAGY AAKHG+VGLTK+TALEGGP+QITANV+CPAYVRTPLVE+QI +QAE LGIS EEVESQVFLKASATG+MIEP EV  +V YLCS+ AKS+TGACWTIDGGWTAQ
Sbjct:   14 SGIGAEIAKTLYNDGCHLVIADLNEPKFLAELSNSIQKVSYIPTDLSDQADCQALVDRAIQKFGAVDILVNNAGFQHISSVEDFPESVWEKMMQVMLTAPFLLTKYVFPGMKRKQWGRIINMGSIHSHVASLNKAGYTAAKHGIVGLTKSTALEGGPYQITANVVCPAYVRTPLVEKQIESQAEALGISSEEVESQVFLKASATGKMIEPVEVVEIVRYLCSDLAKSVTGACWTIDGGWTAQ 255          
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Match: A0A517MMY1_9BACT (D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Roseimaritima multifibrata TaxID=1930274 RepID=A0A517MMY1_9BACT)

HSP 1 Score: 294 bits (752), Expect = 1.820e-97
Identity = 142/242 (58.68%), Postives = 180/242 (74.38%), Query Frame = 1
Query:    1 SGIGAEIARTLYHEGCDVVIADLHEPEYLVELSTEGQRTLFVPTDLSQTEQCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 726
            SGIGA++A+  Y  G  +V+ D + P++L + S       FV  DLS    C+ +V++  +++  +D+LINNAGFQH+ PLE FP  VW +M  VMLTAP  LT+ V  GMK ++WGRI+N+GSIHSQVAS +K GY + KHGL+GLTKT ALEGGP  IT N ICPAYVRTPLVEQQIAAQAET GI  + VES+VFLK++ATG+MI P E++S+V YLCSE A+S+TGA W ID GWTAQ
Sbjct:   16 SGIGADLAKCFYAAGYKLVLTDRNPPDFLDDFSARSDEVHFVQADLSTESGCEQIVQQGLQQFAAIDVLINNAGFQHICPLESFPLDVWHRMFAVMLTAPLRLTQLVWPGMKHKQWGRIVNIGSIHSQVASPHKVGYTSMKHGLIGLTKTAALEGGPEGITVNAICPAYVRTPLVEQQIAAQAETRGIRPDAVESEVFLKSAATGQMIAPQEISSLVLYLCSEHARSVTGANWNIDCGWTAQ 257          
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Match: A0A2A4SYN7_9DELT (D-beta-hydroxybutyrate dehydrogenase n=1 Tax=SAR324 cluster bacterium TaxID=2024889 RepID=A0A2A4SYN7_9DELT)

HSP 1 Score: 277 bits (708), Expect = 7.400e-91
Identity = 141/242 (58.26%), Postives = 181/242 (74.79%), Query Frame = 1
Query:    1 SGIGAEIARTLYHEGCDVVIADLHEPEYLVELSTEGQRTLFVPTDLSQTEQCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 726
            SGIG  IA+ L      V+IADL+E E  V+++ +   T F+ TDLSQ   C++L+E+   ++G VDIL+NNAGFQ++S +E FPE  W ++L VMLTAPFLL KY   GMK+++WGR+IN+ S+H  VASL K+GYI+AKHG++GLTKT ALEGGP+ IT N ICPAYVRTPLVE+QIA QA+T  I   EV  ++ LK +A  R+IEP E+ SMV YLCSE A+SITG+ WTID GWTAQ
Sbjct:   13 SGIGKAIAQQLAQNKIQVIIADLNE-EQGVKVAKDMGAT-FIQTDLSQQIACKNLIEKTIYQFGAVDILVNNAGFQYISSIEKFPEEKWNQLLSVMLTAPFLLMKYAWPGMKKKQWGRVINVASVHGIVASLFKSGYISAKHGMIGLTKTAALEGGPWGITVNAICPAYVRTPLVEKQIADQAKTNQIPESEVIEKILLKNAAIKRLIEPEEIGSMVLYLCSEAARSITGSSWTIDSGWTAQ 252          
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Match: A0A351CNA5_9GAMM (D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A351CNA5_9GAMM)

HSP 1 Score: 276 bits (706), Expect = 1.590e-90
Identity = 142/243 (58.44%), Postives = 178/243 (73.25%), Query Frame = 1
Query:    1 SGIGAEIARTLYHEGCDVVIADLHEPEYL-VELSTEGQRTLFVPTDLSQTEQCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAPFLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKTTALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLKASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ 726
            +GIG  I++ L  EG  VVIAD++E + + V    +G    FV +DL+  E C++LVE   +E+G VDILINNAGFQH+SP+ +F E  WE+M+ +MLTAPFLLTKY    MK  +WGR+INM S+H+QVASLNK GYI+AKHGL+GLTKT ALEGG   IT N ICP+YVRTPLV+ QIAAQA+  GI+ +EV  ++ LK  A   +IEP EVA +V YLCSE AKSITG+   ID GWTAQ
Sbjct:   15 NGIGKSISQKLAEEGHSVVIADVNEDDGMSVAKQIDG---FFVHSDLTDREACKNLVEAAYKEYGSVDILINNAGFQHISPVVEFDEDKWEQMISLMLTAPFLLTKYAWPFMKSNKWGRVINMASVHAQVASLNKVGYISAKHGLIGLTKTAALEGGELGITVNAICPSYVRTPLVDNQIAAQAKAHGINEDEVIEKIMLKTIAIKHLIEPNEVAELVRYLCSESAKSITGSSLNIDCGWTAQ 254          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig83239.19441.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A517PR54_9PLAN4.350e-16595.45D-beta-hydroxybutyrate dehydrogenase n=5 Tax=Gimes... [more]
A0A518A8U5_9PLAN7.080e-15588.02D-beta-hydroxybutyrate dehydrogenase n=2 Tax=Gimes... [more]
A0A518IF01_9PLAN1.140e-14482.23D-beta-hydroxybutyrate dehydrogenase n=2 Tax=Gimes... [more]
A0A517VGF3_9PLAN8.980e-14282.64D-beta-hydroxybutyrate dehydrogenase n=4 Tax=Gimes... [more]
A0A517XE48_9PLAN1.270e-14181.82D-beta-hydroxybutyrate dehydrogenase n=3 Tax=Planc... [more]
A0A2E2C0Y9_9PLAN6.410e-13578.93D-beta-hydroxybutyrate dehydrogenase n=3 Tax=Planc... [more]
A0A517VVA2_9PLAN1.230e-13275.21D-beta-hydroxybutyrate dehydrogenase n=2 Tax=Gimes... [more]
A0A517MMY1_9BACT1.820e-9758.68D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Rosei... [more]
A0A2A4SYN7_9DELT7.400e-9158.26D-beta-hydroxybutyrate dehydrogenase n=1 Tax=SAR32... [more]
A0A351CNA5_9GAMM1.590e-9058.44D-beta-hydroxybutyrate dehydrogenase n=1 Tax=Gamma... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig83239contigM-pyrifera_M_contig83239:168..896 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-19
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score410.6
Seed ortholog evalue5.1e-112
Seed eggNOG ortholog344747.PM8797T_25621
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Enoyl-(Acyl carrier protein) reductase
EggNOG OGs2J38S@203682,COG1028@1,COG1028@2
COG Functional cat.IQ
Best tax levelPlanctomycetes
Best eggNOG OGNA|NA|NA
Exons1
Model size729
Cds size729
Stop1
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622816739.2593234-CDS-M-pyrifera_M_contig83239:167..8961622816739.2593234-CDS-M-pyrifera_M_contig83239:167..896Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83239 168..896 -
1692278149.723236-CDS-M-pyrifera_M_contig83239:167..8961692278149.723236-CDS-M-pyrifera_M_contig83239:167..896Macrocystis pyrifera P11B4 maleCDSM-pyrifera_M_contig83239 168..896 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig83239.19441.1prot_M-pyrifera_M_contig83239.19441.1Macrocystis pyrifera P11B4 malepolypeptideM-pyrifera_M_contig83239 168..896 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_M-pyrifera_M_contig83239.19441.1

>prot_M-pyrifera_M_contig83239.19441.1 ID=prot_M-pyrifera_M_contig83239.19441.1|Name=mRNA_M-pyrifera_M_contig83239.19441.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=243bp
SGIGAEIARTLYHEGCDVVIADLHEPEYLVELSTEGQRTLFVPTDLSQTE
QCQSLVERVTREWGGVDILINNAGFQHVSPLEDFPEAVWEKMLQVMLTAP
FLLTKYVLSGMKERRWGRIINMGSIHSQVASLNKAGYIAAKHGLVGLTKT
TALEGGPFQITANVICPAYVRTPLVEQQIAAQAETLGISIEEVESQVFLK
ASATGRMIEPAEVASMVSYLCSEQAKSITGACWTIDGGWTAQ*
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mRNA from alignment at M-pyrifera_M_contig83239:168..896-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_M-pyrifera_M_contig83239.19441.1 ID=mRNA_M-pyrifera_M_contig83239.19441.1|Name=mRNA_M-pyrifera_M_contig83239.19441.1|organism=Macrocystis pyrifera P11B4 male|type=mRNA|length=729bp|location=Sequence derived from alignment at M-pyrifera_M_contig83239:168..896- (Macrocystis pyrifera P11B4 male)
AGCGGCATCGGGGCGGAAATCGCCCGGACGCTGTACCATGAAGGCTGTGA TGTGGTGATCGCCGATCTGCACGAGCCTGAATATCTCGTAGAGCTGTCTA CGGAAGGACAGCGAACGCTGTTTGTCCCCACCGATCTGTCGCAGACGGAG CAGTGTCAGTCGCTGGTGGAGCGGGTGACCCGGGAGTGGGGTGGCGTAGA CATCCTGATCAACAATGCGGGCTTTCAGCATGTCTCGCCATTGGAAGATT TTCCGGAAGCGGTCTGGGAGAAGATGCTGCAGGTGATGCTGACAGCTCCC TTTCTGCTGACAAAGTATGTCCTGTCCGGAATGAAAGAGCGGCGGTGGGG ACGCATCATCAACATGGGCTCGATTCATTCCCAGGTGGCCTCACTCAATA AAGCGGGGTACATTGCCGCCAAGCATGGACTGGTGGGATTGACGAAAACG ACGGCCCTGGAAGGGGGACCGTTTCAGATCACCGCCAATGTGATCTGTCC CGCCTATGTGCGAACGCCCCTGGTCGAACAGCAGATCGCGGCCCAGGCGG AGACTCTGGGGATCAGCATTGAAGAGGTGGAAAGTCAGGTCTTCCTGAAA GCGTCTGCGACGGGCCGCATGATTGAGCCTGCCGAGGTGGCGTCGATGGT CAGTTATCTCTGTTCGGAGCAGGCCAAATCCATCACCGGTGCCTGTTGGA CCATCGATGGCGGCTGGACGGCCCAATAG
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Coding sequence (CDS) from alignment at M-pyrifera_M_contig83239:168..896-

>mRNA_M-pyrifera_M_contig83239.19441.1 ID=mRNA_M-pyrifera_M_contig83239.19441.1|Name=mRNA_M-pyrifera_M_contig83239.19441.1|organism=Macrocystis pyrifera P11B4 male|type=CDS|length=1458bp|location=Sequence derived from alignment at M-pyrifera_M_contig83239:168..896- (Macrocystis pyrifera P11B4 male)
AGCGGCATCGGGGCGGAAATCGCCCGGACGCTGTACCATGAAGGCTGTGA
TGTGGTGATCGCCGATCTGCACGAGCCTGAATATCTCGTAGAGCTGTCTA
CGGAAGGACAGCGAACGCTGTTTGTCCCCACCGATCTGTCGCAGACGGAG
CAGTGTCAGTCGCTGGTGGAGCGGGTGACCCGGGAGTGGGGTGGCGTAGA
CATCCTGATCAACAATGCGGGCTTTCAGCATGTCTCGCCATTGGAAGATT
TTCCGGAAGCGGTCTGGGAGAAGATGCTGCAGGTGATGCTGACAGCTCCC
TTTCTGCTGACAAAGTATGTCCTGTCCGGAATGAAAGAGCGGCGGTGGGG
ACGCATCATCAACATGGGCTCGATTCATTCCCAGGTGGCCTCACTCAATA
AAGCGGGGTACATTGCCGCCAAGCATGGACTGGTGGGATTGACGAAAACG
ACGGCCCTGGAAGGGGGACCGTTTCAGATCACCGCCAATGTGATCTGTCC
CGCCTATGTGCGAACGCCCCTGGTCGAACAGCAGATCGCGGCCCAGGCGG
AGACTCTGGGGATCAGCATTGAAGAGGTGGAAAGTCAGGTCTTCCTGAAA
GCGTCTGCGACGGGCCGCATGATTGAGCCTGCCGAGGTGGCGTCGATGGT
CAGTTATCTCTGTTCGGAGCAGGCCAAATCCATCACCGGTGCCTGTTGGA
CCATCGATGGCGGCTGGACGGCCCAATAGAGCGGCATCGGGGCGGAAATC
GCCCGGACGCTGTACCATGAAGGCTGTGATGTGGTGATCGCCGATCTGCA
CGAGCCTGAATATCTCGTAGAGCTGTCTACGGAAGGACAGCGAACGCTGT
TTGTCCCCACCGATCTGTCGCAGACGGAGCAGTGTCAGTCGCTGGTGGAG
CGGGTGACCCGGGAGTGGGGTGGCGTAGACATCCTGATCAACAATGCGGG
CTTTCAGCATGTCTCGCCATTGGAAGATTTTCCGGAAGCGGTCTGGGAGA
AGATGCTGCAGGTGATGCTGACAGCTCCCTTTCTGCTGACAAAGTATGTC
CTGTCCGGAATGAAAGAGCGGCGGTGGGGACGCATCATCAACATGGGCTC
GATTCATTCCCAGGTGGCCTCACTCAATAAAGCGGGGTACATTGCCGCCA
AGCATGGACTGGTGGGATTGACGAAAACGACGGCCCTGGAAGGGGGACCG
TTTCAGATCACCGCCAATGTGATCTGTCCCGCCTATGTGCGAACGCCCCT
GGTCGAACAGCAGATCGCGGCCCAGGCGGAGACTCTGGGGATCAGCATTG
AAGAGGTGGAAAGTCAGGTCTTCCTGAAAGCGTCTGCGACGGGCCGCATG
ATTGAGCCTGCCGAGGTGGCGTCGATGGTCAGTTATCTCTGTTCGGAGCA
GGCCAAATCCATCACCGGTGCCTGTTGGACCATCGATGGCGGCTGGACGG
CCCAATAG
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